BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023977
         (624 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...    89   8e-16
ref|XP_002299005.1| predicted protein [Populus trichocarpa] gi|2...    86   7e-15
ref|XP_002298144.1| predicted protein [Populus trichocarpa] gi|2...    85   9e-15
ref|XP_002527480.1| conserved hypothetical protein [Ricinus comm...    84   3e-14
ref|XP_003612172.1| F-box family protein [Medicago truncatula] g...    81   2e-13

>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
           gi|222861279|gb|EEE98821.1| f-box family protein
           [Populus trichocarpa]
          Length = 422

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 64/176 (36%), Positives = 91/176 (51%), Gaps = 9/176 (5%)
 Frame = +3

Query: 96  LPGDIIVNILCRIPVKSLSSQCRMVCKTWYDLIGHPHFAEFHYRWAIQNCCSPCVVL-CD 272
           LP +I  +IL R+P+ SL  Q + VC+ W  L+  P   + +   + Q+   PC++L CD
Sbjct: 28  LPREIAHDILSRLPITSLV-QFKCVCRAWRALVQDPQLVDLYLSCSTQDTDHPCLILHCD 86

Query: 273 --AMSGFWFIDHQVFDNLETS-----APVHSLEFLKEPEFEKTLQVIGSVNGLLCFSEDQ 431
               +  +F+D    +  +       AP  S+     PEFE    V+GS NGLLC S+  
Sbjct: 87  FPIRNNLYFVDFAAHEEEKEKVKRIPAPFSSMM----PEFE----VVGSCNGLLCLSDSL 138

Query: 432 YKCSYPVFYYICNPITGEHIRLPRARELFHVEV-SAFGFDSTTNEYKVIRFHYDRD 596
           Y  S     YI NP TG +  LP++ +    EV S FGF+  T EYKVIR  Y R+
Sbjct: 139 YNDSL----YIYNPFTGCYKELPKSLQYPDQEVVSGFGFNPKTKEYKVIRIVYYRN 190


>ref|XP_002299005.1| predicted protein [Populus trichocarpa] gi|222846263|gb|EEE83810.1|
           predicted protein [Populus trichocarpa]
          Length = 412

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 55/180 (30%), Positives = 91/180 (50%), Gaps = 4/180 (2%)
 Frame = +3

Query: 96  LPGDIIVNILCRIPVKSLSSQCRMVCKTWYDLIGHPHFAEFHYRWAIQNCCSPCVVLCDA 275
           +P DI+  IL ++P KSL  + R VCKTW  LI  P F + H   ++   C   +++   
Sbjct: 33  IPQDIVAEILAKLPAKSLM-RFRCVCKTWSSLIRDPFFVKLHQNQSLNKPCKTGLLMS-- 89

Query: 276 MSGFWFIDHQVFDNLETSAPVHSLEFLKEP--EFEKTLQVIGSVNGLLCFSEDQYKCSYP 449
                   HQ+F++    A     + L+E      K+  V+G  NGL C   D+++ S  
Sbjct: 90  ------TKHQLFNSHFVFADHEGKQALEEDTISIPKSSNVLGIANGLACIVNDKHRIS-- 141

Query: 450 VFYYICNPITGEHIRLPRARELFHVEVS-AFGFDSTTNEYKVIRF-HYDRDEGEVFTLGS 623
               + N  T E   +P   +   ++   +FGFD   NEYK+++F  +D+++ E+FTLG+
Sbjct: 142 ----VYNLSTRESTTIPPPPQEIRIQDRLSFGFDPLANEYKIVKFCAHDKEQFEIFTLGT 197


>ref|XP_002298144.1| predicted protein [Populus trichocarpa] gi|222845402|gb|EEE82949.1|
           predicted protein [Populus trichocarpa]
          Length = 391

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 62/185 (33%), Positives = 95/185 (51%), Gaps = 9/185 (4%)
 Frame = +3

Query: 96  LPGDIIVNILCRIPVKSLSSQCRMVCKTWYDLIGHPHFAEFHYRWAIQNCCSPCVVLCDA 275
           LP +I V+IL R+PV++++ QC+ VCK+W DL+  P+FA  H+  A  +    C    + 
Sbjct: 24  LPAEIFVDILSRLPVEAMT-QCKSVCKSWRDLLSTPYFARLHFAKAKPSSLLFCHCSGNK 82

Query: 276 MSGFWFIDHQVFDNLETSAPVHSLEFLKEPEFEKTLQVIGSVNGLLCFSEDQYKCSYPVF 455
              +    H    +   +A V      K P+     +V+GS NGLLC SE          
Sbjct: 83  TKLYCCHIHSSRGSNINNAMVSMPTKFKLPKNTFRGKVVGSSNGLLCLSEIH---RMKKK 139

Query: 456 YYICNPITGEHIRL--PRARELFHV-EVSAFGFDSTTNEYKV----IRFHYDR--DEGEV 608
           +YICNPITGE+I +  P+  + +HV E   F ++    + K+    +R  Y      G++
Sbjct: 140 FYICNPITGEYIGIAGPKVDQGWHVFEPIGFFYNPQNQQCKILMPRVRVGYGNFPGSGQI 199

Query: 609 FTLGS 623
           FTLGS
Sbjct: 200 FTLGS 204


>ref|XP_002527480.1| conserved hypothetical protein [Ricinus communis]
           gi|223533120|gb|EEF34878.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 379

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 54/173 (31%), Positives = 90/173 (52%), Gaps = 5/173 (2%)
 Frame = +3

Query: 84  LFSKLPGDIIVNILCRIPVKSLSSQCRMVCKTWYDLIGHPHFAEFHYRWAIQNCCSPCVV 263
           +   +P ++++ I  R+PVK L  +CR +CKTWY LI + +F   H R+ I +  +  ++
Sbjct: 1   MLDHIPKEVLIKIFLRLPVKQLL-RCRCICKTWYSLISNHNFISTHSRYTIDSNNNNYLI 59

Query: 264 L---CDAMSGFWFIDHQVFDNLETSAPVHSLEFLKEPEFEKTLQVIGSVNGLLCFSEDQY 434
           L     +     F  H  FD+ +  +    L+F  E  ++   +++GS NG++C +++  
Sbjct: 60  LRHYSRSNKKERFALH--FDDDDMFSEYQELDFPLESSWD-YFEIVGSCNGIICLTDNHS 116

Query: 435 KCSYPVFYYICNPITGEHIRLPRARELFHVE--VSAFGFDSTTNEYKVIRFHY 587
                +  +  NP  G  + LP  R  + V   V  FGFDS TN+YKVIR  Y
Sbjct: 117 HILKRIVLW--NPSIGLSVTLPLQRISYKVSNVVLGFGFDSRTNDYKVIRIVY 167


>ref|XP_003612172.1| F-box family protein [Medicago truncatula]
           gi|355513507|gb|AES95130.1| F-box family protein
           [Medicago truncatula]
          Length = 428

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 64/178 (35%), Positives = 86/178 (48%), Gaps = 14/178 (7%)
 Frame = +3

Query: 87  FSKLPGDIIVNILCRIPVKSLSSQCRMVCKTWYDLIGHPHFAEFHYRWAIQNC----CSP 254
           F  LP  II +IL  +P+KSL   C+ VCK W  LI  PHFA+ ++  + Q C       
Sbjct: 31  FDNLPSHIIAHILLHLPIKSLLI-CKCVCKIWKTLISEPHFAKLNFERS-QVCLMIRIDD 88

Query: 255 CVVLCDAMSGFWFID-HQVFDNLETSAPVHSLEFLKEPEFEKTLQVIGSVNGLLCFSEDQ 431
           C ++   M G   +    +F+N ++      L F  +P+++K   V  S NG+LC     
Sbjct: 89  CRLVSRTMIGSNHVKLAPIFNNRDS----QRLNFDFKPDYDK-FGVANSCNGMLCLC--- 140

Query: 432 YKCSYPVF-YYICNPITGEHIRLPRARELFHVEVS--------AFGFDSTTNEYKVIR 578
             C +      ICNP+TGE IRL  A    H  VS          GF   TNEYKVIR
Sbjct: 141 --CPFEGHPLLICNPLTGEFIRLHEATLNTHDMVSVPNMLGQVGLGFQPKTNEYKVIR 196