BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023959
         (1168 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003566938.1| PREDICTED: pentatricopeptide repeat-containi...   414   e-113
gb|EAY75164.1| hypothetical protein OsI_03056 [Oryza sativa Indi...   402   e-110
gb|EAZ12888.1| hypothetical protein OsJ_02809 [Oryza sativa Japo...   402   e-110
gb|ABR17838.1| unknown [Picea sitchensis]                             350   4e-94
ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containi...   347   3e-93

>ref|XP_003566938.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Brachypodium distachyon]
          Length = 670

 Score =  414 bits (1064), Expect = e-113
 Identities = 201/388 (51%), Positives = 270/388 (69%)
 Frame = -3

Query: 1166 RDIVSWTSMISGYAQLNCCDECFVLFDEMRRVSVEPNKITVVSLLSACGNVRDLDRGKWI 987
            RD+VSWT MIS +AQ    D      DEM+    +PNKIT++SLLSACG VR +D+G W+
Sbjct: 186  RDVVSWTLMISAFAQCGQWDNVLRSLDEMQSEGTKPNKITIISLLSACGQVRAVDKGLWV 245

Query: 986  HSYVFDNKMEGDIVVGNALVNMYAKCGCMSSALEVFRNISTANTVSWNVLIGGFSQNGFP 807
            ++ V +  +E D+ + NAL+ MY KCGCMS A + F+ +   NT SWN LI GF QNG  
Sbjct: 246  YARVDEYGIEADVDIRNALIGMYVKCGCMSDAWKTFKGMPIRNTKSWNTLIDGFVQNGKH 305

Query: 806  SEALRLFHEMKKSDIRPNEITFVNTLSACAQLGDLEQGKVLHNYVVENNIVYDIFIGNAL 627
             EAL +F EM    + P+ IT V+ LS  AQLGDL+QG+ LHNY+ ++ I  DI + N+L
Sbjct: 306  KEALTMFEEMLSDGVIPDVITLVSVLSTYAQLGDLQQGRYLHNYIKDHEIHCDIILQNSL 365

Query: 626  INMYSKCGNLETAVCVFRQMPDKDVFSWTTLVSGYVQGSKFKEALTLFEEMQMSGVEPNE 447
            INMY+KCG++  A  +F  M  +D+ SWT +V GYV+G +F+ A  LF++M++  V  +E
Sbjct: 366  INMYAKCGDMAAAEIIFENMARRDIVSWTAMVCGYVKGLQFRTAFNLFDDMKVRDVMASE 425

Query: 446  VTLVSLLSACAQTGALDQGKWIHNYIEEHSVRQDVCLGNALIDMYVKCGSIKSALQLFHR 267
            + LVSLLSAC+Q GALD+G+ IH+YI+E SVR D+ L +AL+DMY KCG I +A ++F R
Sbjct: 426  MALVSLLSACSQLGALDKGREIHSYIKEKSVRTDMWLESALVDMYAKCGCIDAAAEIFSR 485

Query: 266  MHLKDTSSWNALMGGLAMHGHGREALILFSQMQRVGDTRPDCVTYANVLCACTHSGMVRE 87
            M  K T +WNA++GGLA  G G+EA+ LF Q+ ++ D +PD +T   VLCACTH GMV E
Sbjct: 486  MRHKQTLAWNAMIGGLASQGQGKEAVALFEQLLKLRDPKPDAITLKVVLCACTHVGMVDE 545

Query: 86   GYHLFNSMSSLYGITPTIEHYGCMVDLL 3
            G H FN M +L GI P  EHYGC+VDLL
Sbjct: 546  GLHYFNLMLTL-GIVPDNEHYGCIVDLL 572



 Score =  231 bits (589), Expect = 3e-58
 Identities = 131/361 (36%), Positives = 197/361 (54%), Gaps = 3/361 (0%)
 Frame = -3

Query: 1157 VSWTSMISGYAQLNCCDECFVLFDEMRRVSVEPNKITVVSLL---SACGNVRDLDRGKWI 987
            + W  MI GY   +   +   LF  MRR  V P+  T+ ++    +A  + +    G  +
Sbjct: 85   IVWNCMIRGYNSCHAPMDALELFRAMRRSGVSPDNYTMAAVAQSSAAFASWKGRATGDAV 144

Query: 986  HSYVFDNKMEGDIVVGNALVNMYAKCGCMSSALEVFRNISTANTVSWNVLIGGFSQNGFP 807
            H+ V       D+ V + L+N Y     +  A +VF  +   + VSW ++I  F+Q G  
Sbjct: 145  HALVQRIGFASDLFVMSGLINFYGASKSVEDARKVFEEMHERDVVSWTLMISAFAQCGQW 204

Query: 806  SEALRLFHEMKKSDIRPNEITFVNTLSACAQLGDLEQGKVLHNYVVENNIVYDIFIGNAL 627
               LR   EM+    +PN+IT ++ LSAC Q+  +++G  ++  V E  I  D+ I NAL
Sbjct: 205  DNVLRSLDEMQSEGTKPNKITIISLLSACGQVRAVDKGLWVYARVDEYGIEADVDIRNAL 264

Query: 626  INMYSKCGNLETAVCVFRQMPDKDVFSWTTLVSGYVQGSKFKEALTLFEEMQMSGVEPNE 447
            I MY KCG +  A   F+ MP ++  SW TL+ G+VQ  K KEALT+FEEM   GV P+ 
Sbjct: 265  IGMYVKCGCMSDAWKTFKGMPIRNTKSWNTLIDGFVQNGKHKEALTMFEEMLSDGVIPDV 324

Query: 446  VTLVSLLSACAQTGALDQGKWIHNYIEEHSVRQDVCLGNALIDMYVKCGSIKSALQLFHR 267
            +TLVS+LS  AQ G L QG+++HNYI++H +  D+ L N+LI+MY KCG + +A  +F  
Sbjct: 325  ITLVSVLSTYAQLGDLQQGRYLHNYIKDHEIHCDIILQNSLINMYAKCGDMAAAEIIFEN 384

Query: 266  MHLKDTSSWNALMGGLAMHGHGREALILFSQMQRVGDTRPDCVTYANVLCACTHSGMVRE 87
            M  +D  SW A++ G       R A  LF  M +V D     +   ++L AC+  G + +
Sbjct: 385  MARRDIVSWTAMVCGYVKGLQFRTAFNLFDDM-KVRDVMASEMALVSLLSACSQLGALDK 443

Query: 86   G 84
            G
Sbjct: 444  G 444



 Score =  204 bits (520), Expect = 3e-50
 Identities = 101/321 (31%), Positives = 188/321 (58%), Gaps = 2/321 (0%)
 Frame = -3

Query: 1166 RDIVSWTSMISGYAQLNCCDECFVLFDEMRRVSVEPNKITVVSLLSACGNVRDLDRGKWI 987
            R+  SW ++I G+ Q     E   +F+EM    V P+ IT+VS+LS    + DL +G+++
Sbjct: 287  RNTKSWNTLIDGFVQNGKHKEALTMFEEMLSDGVIPDVITLVSVLSTYAQLGDLQQGRYL 346

Query: 986  HSYVFDNKMEGDIVVGNALVNMYAKCGCMSSALEVFRNISTANTVSWNVLIGGFSQNGFP 807
            H+Y+ D+++  DI++ N+L+NMYAKCG M++A  +F N++  + VSW  ++ G+ +    
Sbjct: 347  HNYIKDHEIHCDIILQNSLINMYAKCGDMAAAEIIFENMARRDIVSWTAMVCGYVKGLQF 406

Query: 806  SEALRLFHEMKKSDIRPNEITFVNTLSACAQLGDLEQGKVLHNYVVENNIVYDIFIGNAL 627
              A  LF +MK  D+  +E+  V+ LSAC+QLG L++G+ +H+Y+ E ++  D+++ +AL
Sbjct: 407  RTAFNLFDDMKVRDVMASEMALVSLLSACSQLGALDKGREIHSYIKEKSVRTDMWLESAL 466

Query: 626  INMYSKCGNLETAVCVFRQMPDKDVFSWTTLVSGYVQGSKFKEALTLFEEM-QMSGVEPN 450
            ++MY+KCG ++ A  +F +M  K   +W  ++ G     + KEA+ LFE++ ++   +P+
Sbjct: 467  VDMYAKCGCIDAAAEIFSRMRHKQTLAWNAMIGGLASQGQGKEAVALFEQLLKLRDPKPD 526

Query: 449  EVTLVSLLSACAQTGALDQGKWIHNYIEEHSVRQDVCLGNALIDMYVKCGSIKSALQLFH 270
             +TL  +L AC   G +D+G    N +    +  D      ++D+  + G +  A     
Sbjct: 527  AITLKVVLCACTHVGMVDEGLHYFNLMLTLGIVPDNEHYGCIVDLLGRAGLLDEAYNFIQ 586

Query: 269  RMHLK-DTSSWNALMGGLAMH 210
            +M ++ +   W +L+    +H
Sbjct: 587  KMPIQPNPVIWGSLLAACRVH 607



 Score = 80.1 bits (196), Expect = 1e-12
 Identities = 60/248 (24%), Positives = 110/248 (44%), Gaps = 6/248 (2%)
 Frame = -3

Query: 731 LSACAQLGDLEQGKVLHNYVVENNIVYDIFIGNALINMYSKC---GNLETAVCVFRQMPD 561
           L ACA   +L +   LH  +V  ++  D  +   L+ + +      ++  A  VF +M  
Sbjct: 25  LDACASRANLAE---LHGRLVRAHLGSDPCVAGRLVTLLASPVSRHDMPYARKVFDRMAQ 81

Query: 560 KDVFSWTTLVSGYVQGSKFKEALTLFEEMQMSGVEPNEVTLVSLL---SACAQTGALDQG 390
                W  ++ GY       +AL LF  M+ SGV P+  T+ ++    +A A       G
Sbjct: 82  PTAIVWNCMIRGYNSCHAPMDALELFRAMRRSGVSPDNYTMAAVAQSSAAFASWKGRATG 141

Query: 389 KWIHNYIEEHSVRQDVCLGNALIDMYVKCGSIKSALQLFHRMHLKDTSSWNALMGGLAMH 210
             +H  ++      D+ + + LI+ Y    S++ A ++F  MH +D  SW  ++   A  
Sbjct: 142 DAVHALVQRIGFASDLFVMSGLINFYGASKSVEDARKVFEEMHERDVVSWTLMISAFAQC 201

Query: 209 GHGREALILFSQMQRVGDTRPDCVTYANVLCACTHSGMVREGYHLFNSMSSLYGITPTIE 30
           G     L    +MQ  G T+P+ +T  ++L AC     V +G  ++  +   YGI   ++
Sbjct: 202 GQWDNVLRSLDEMQSEG-TKPNKITIISLLSACGQVRAVDKGLWVYARVDE-YGIEADVD 259

Query: 29  HYGCMVDL 6
               ++ +
Sbjct: 260 IRNALIGM 267


>gb|EAY75164.1| hypothetical protein OsI_03056 [Oryza sativa Indica Group]
          Length = 669

 Score =  402 bits (1033), Expect = e-110
 Identities = 199/388 (51%), Positives = 269/388 (69%)
 Frame = -3

Query: 1166 RDIVSWTSMISGYAQLNCCDECFVLFDEMRRVSVEPNKITVVSLLSACGNVRDLDRGKWI 987
            RD+VSWTSMIS  AQ    D+   +  EM+   + PNK+T++SLLSACG  + +D G+W+
Sbjct: 185  RDVVSWTSMISACAQCGHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWV 244

Query: 986  HSYVFDNKMEGDIVVGNALVNMYAKCGCMSSALEVFRNISTANTVSWNVLIGGFSQNGFP 807
            ++ V    +E D+ + NAL++MY KCGC+S ALE F+ +    T SWN LI GF QN   
Sbjct: 245  YNQVGKFGIEADVDIRNALISMYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEH 304

Query: 806  SEALRLFHEMKKSDIRPNEITFVNTLSACAQLGDLEQGKVLHNYVVENNIVYDIFIGNAL 627
             EALR+F EM    + P+ IT V+ LSACAQLG+L +G  +H+Y+ +N I  D  + N+L
Sbjct: 305  KEALRIFEEMLLHGVTPDGITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSL 364

Query: 626  INMYSKCGNLETAVCVFRQMPDKDVFSWTTLVSGYVQGSKFKEALTLFEEMQMSGVEPNE 447
            INMY+KCG++  A  VF+ M  KDV SWT +V GYV+G +F  A  LFEEM+++ V  +E
Sbjct: 365  INMYAKCGDMAAAERVFQTMTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHE 424

Query: 446  VTLVSLLSACAQTGALDQGKWIHNYIEEHSVRQDVCLGNALIDMYVKCGSIKSALQLFHR 267
            + LVSLLSAC+Q GALD+G+ IH+YIEE +V +D+CL +AL+DMY KCG I +A ++F +
Sbjct: 425  MALVSLLSACSQLGALDKGREIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRK 484

Query: 266  MHLKDTSSWNALMGGLAMHGHGREALILFSQMQRVGDTRPDCVTYANVLCACTHSGMVRE 87
            M  K T SWNA++GGLA +G+G+EA+ LF QM  + D +PD +T   VL AC H GMV E
Sbjct: 485  MQHKQTLSWNAMIGGLASNGYGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVGMVDE 544

Query: 86   GYHLFNSMSSLYGITPTIEHYGCMVDLL 3
            G   F  MSSL G+ P  EHYGC+VDLL
Sbjct: 545  GLRYFYLMSSL-GVVPDTEHYGCIVDLL 571



 Score =  228 bits (580), Expect = 3e-57
 Identities = 128/369 (34%), Positives = 203/369 (55%), Gaps = 3/369 (0%)
 Frame = -3

Query: 1151 WTSMISGYAQLNCCDECFVLFDEMRRVSVEPNKITVVSLLSACGNVRDL---DRGKWIHS 981
            W  MI GY+      +   +F EMRR  V P+  T+ +++SA      L     G  IH+
Sbjct: 86   WNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAAFAGLKWRSNGDAIHA 145

Query: 980  YVFDNKMEGDIVVGNALVNMYAKCGCMSSALEVFRNISTANTVSWNVLIGGFSQNGFPSE 801
             V       D+ V + LVN Y     +  A +VF  +   + VSW  +I   +Q G   +
Sbjct: 146  LVRRIGFTSDVFVMSGLVNYYGAFRSVKEASKVFEEMYERDVVSWTSMISACAQCGHWDK 205

Query: 800  ALRLFHEMKKSDIRPNEITFVNTLSACAQLGDLEQGKVLHNYVVENNIVYDIFIGNALIN 621
             L++  EM+   I PN++T ++ LSAC Q   +++G+ ++N V +  I  D+ I NALI+
Sbjct: 206  VLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALIS 265

Query: 620  MYSKCGNLETAVCVFRQMPDKDVFSWTTLVSGYVQGSKFKEALTLFEEMQMSGVEPNEVT 441
            MY+KCG L  A+  F+ MP +   SW TL+ G+VQ  + KEAL +FEEM + GV P+ +T
Sbjct: 266  MYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGIT 325

Query: 440  LVSLLSACAQTGALDQGKWIHNYIEEHSVRQDVCLGNALIDMYVKCGSIKSALQLFHRMH 261
            LVS+LSACAQ G L +G  +H+YI+++ +  D  L N+LI+MY KCG + +A ++F  M 
Sbjct: 326  LVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQTMT 385

Query: 260  LKDTSSWNALMGGLAMHGHGREALILFSQMQRVGDTRPDCVTYANVLCACTHSGMVREGY 81
             KD  SW  ++ G         A  LF +M ++ +     +   ++L AC+  G + +G 
Sbjct: 386  KKDVVSWTVMVCGYVKGHQFTMAFNLFEEM-KIAEVVAHEMALVSLLSACSQLGALDKGR 444

Query: 80   HLFNSMSSL 54
             + + +  +
Sbjct: 445  EIHSYIEEM 453



 Score =  201 bits (510), Expect = 4e-49
 Identities = 112/335 (33%), Positives = 178/335 (53%), Gaps = 6/335 (1%)
 Frame = -3

Query: 1061 PNKITVVSLLSACGNVRDLDRGKWIHSYVFDNKMEGDIVVGNALVNMYAKCGC---MSSA 891
            P +  +++ L AC +   L     +H  +    +  D  V   L+ + A       M  A
Sbjct: 15   PIRHHLLAYLDACASRAHLAE---LHGRLVRAHLTSDSFVAGRLIALLASPAARHDMRYA 71

Query: 890  LEVFRNISTANTVSWNVLIGGFSQNGFPSEALRLFHEMKKSDIRPNEITFVNTLSACAQL 711
             +VF  ++  N   WN +I G+S    P +AL +F EM++  + P+  T    +SA A  
Sbjct: 72   RKVFDGMAQPNAFVWNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAAF 131

Query: 710  GDLE---QGKVLHNYVVENNIVYDIFIGNALINMYSKCGNLETAVCVFRQMPDKDVFSWT 540
              L+    G  +H  V       D+F+ + L+N Y    +++ A  VF +M ++DV SWT
Sbjct: 132  AGLKWRSNGDAIHALVRRIGFTSDVFVMSGLVNYYGAFRSVKEASKVFEEMYERDVVSWT 191

Query: 539  TLVSGYVQGSKFKEALTLFEEMQMSGVEPNEVTLVSLLSACAQTGALDQGKWIHNYIEEH 360
            +++S   Q   + + L +  EMQ  G+ PN+VT++SLLSAC QT A+D+G+W++N + + 
Sbjct: 192  SMISACAQCGHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKF 251

Query: 359  SVRQDVCLGNALIDMYVKCGSIKSALQLFHRMHLKDTSSWNALMGGLAMHGHGREALILF 180
             +  DV + NALI MY KCG +  AL+ F  M  + T SWN L+ G   +   +EAL +F
Sbjct: 252  GIEADVDIRNALISMYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIF 311

Query: 179  SQMQRVGDTRPDCVTYANVLCACTHSGMVREGYHL 75
             +M   G T PD +T  +VL AC   G +R+G H+
Sbjct: 312  EEMLLHGVT-PDGITLVSVLSACAQLGELRKGMHV 345


>gb|EAZ12888.1| hypothetical protein OsJ_02809 [Oryza sativa Japonica Group]
          Length = 669

 Score =  402 bits (1033), Expect = e-110
 Identities = 199/388 (51%), Positives = 269/388 (69%)
 Frame = -3

Query: 1166 RDIVSWTSMISGYAQLNCCDECFVLFDEMRRVSVEPNKITVVSLLSACGNVRDLDRGKWI 987
            RD+VSWTSMIS  AQ    D+   +  EM+   + PNK+T++SLLSACG  + +D G+W+
Sbjct: 185  RDVVSWTSMISACAQCGHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWV 244

Query: 986  HSYVFDNKMEGDIVVGNALVNMYAKCGCMSSALEVFRNISTANTVSWNVLIGGFSQNGFP 807
            ++ V    +E D+ + NAL++MY KCGC+S ALE F+ +    T SWN LI GF QN   
Sbjct: 245  YNQVGKFGIEADVDIRNALISMYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEH 304

Query: 806  SEALRLFHEMKKSDIRPNEITFVNTLSACAQLGDLEQGKVLHNYVVENNIVYDIFIGNAL 627
             EALR+F EM    + P+ IT V+ LSACAQLG+L +G  +H+Y+ +N I  D  + N+L
Sbjct: 305  KEALRIFEEMLLHGVTPDGITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSL 364

Query: 626  INMYSKCGNLETAVCVFRQMPDKDVFSWTTLVSGYVQGSKFKEALTLFEEMQMSGVEPNE 447
            INMY+KCG++  A  VF+ M  KDV SWT +V GYV+G +F  A  LFEEM+++ V  +E
Sbjct: 365  INMYAKCGDMAAAERVFQTMTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHE 424

Query: 446  VTLVSLLSACAQTGALDQGKWIHNYIEEHSVRQDVCLGNALIDMYVKCGSIKSALQLFHR 267
            + LVSLLSAC+Q GALD+G+ IH+YIEE +V +D+CL +AL+DMY KCG I +A ++F +
Sbjct: 425  MALVSLLSACSQLGALDKGREIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRK 484

Query: 266  MHLKDTSSWNALMGGLAMHGHGREALILFSQMQRVGDTRPDCVTYANVLCACTHSGMVRE 87
            M  K T SWNA++GGLA +G+G+EA+ LF QM  + D +PD +T   VL AC H GMV E
Sbjct: 485  MQHKQTLSWNAMIGGLASNGYGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVGMVDE 544

Query: 86   GYHLFNSMSSLYGITPTIEHYGCMVDLL 3
            G   F  MSSL G+ P  EHYGC+VDLL
Sbjct: 545  GLRYFYLMSSL-GVVPDTEHYGCIVDLL 571



 Score =  228 bits (580), Expect = 3e-57
 Identities = 128/369 (34%), Positives = 203/369 (55%), Gaps = 3/369 (0%)
 Frame = -3

Query: 1151 WTSMISGYAQLNCCDECFVLFDEMRRVSVEPNKITVVSLLSACGNVRDL---DRGKWIHS 981
            W  MI GY+      +   +F EMRR  V P+  T+ +++SA      L     G  IH+
Sbjct: 86   WNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAAFAGLKWRSNGDAIHA 145

Query: 980  YVFDNKMEGDIVVGNALVNMYAKCGCMSSALEVFRNISTANTVSWNVLIGGFSQNGFPSE 801
             V       D+ V + LVN Y     +  A +VF  +   + VSW  +I   +Q G   +
Sbjct: 146  LVRRIGFTSDVFVMSGLVNYYGAFRSVEEASKVFEEMYERDVVSWTSMISACAQCGHWDK 205

Query: 800  ALRLFHEMKKSDIRPNEITFVNTLSACAQLGDLEQGKVLHNYVVENNIVYDIFIGNALIN 621
             L++  EM+   I PN++T ++ LSAC Q   +++G+ ++N V +  I  D+ I NALI+
Sbjct: 206  VLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALIS 265

Query: 620  MYSKCGNLETAVCVFRQMPDKDVFSWTTLVSGYVQGSKFKEALTLFEEMQMSGVEPNEVT 441
            MY+KCG L  A+  F+ MP +   SW TL+ G+VQ  + KEAL +FEEM + GV P+ +T
Sbjct: 266  MYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGIT 325

Query: 440  LVSLLSACAQTGALDQGKWIHNYIEEHSVRQDVCLGNALIDMYVKCGSIKSALQLFHRMH 261
            LVS+LSACAQ G L +G  +H+YI+++ +  D  L N+LI+MY KCG + +A ++F  M 
Sbjct: 326  LVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQTMT 385

Query: 260  LKDTSSWNALMGGLAMHGHGREALILFSQMQRVGDTRPDCVTYANVLCACTHSGMVREGY 81
             KD  SW  ++ G         A  LF +M ++ +     +   ++L AC+  G + +G 
Sbjct: 386  KKDVVSWTVMVCGYVKGHQFTMAFNLFEEM-KIAEVVAHEMALVSLLSACSQLGALDKGR 444

Query: 80   HLFNSMSSL 54
             + + +  +
Sbjct: 445  EIHSYIEEM 453



 Score =  202 bits (514), Expect = 1e-49
 Identities = 113/335 (33%), Positives = 178/335 (53%), Gaps = 6/335 (1%)
 Frame = -3

Query: 1061 PNKITVVSLLSACGNVRDLDRGKWIHSYVFDNKMEGDIVVGNALVNMYAKCGC---MSSA 891
            P +  +++ L AC +   L     +H  +    +  D  V   L+ + A       M  A
Sbjct: 15   PIRHHLLAYLDACASRAHLAE---LHGRLVRAHLTSDSFVAGRLIALLASPAARHDMRYA 71

Query: 890  LEVFRNISTANTVSWNVLIGGFSQNGFPSEALRLFHEMKKSDIRPNEITFVNTLSACAQL 711
             +VF  ++  N   WN +I G+S    P +AL +F EM++  + P+  T    +SA A  
Sbjct: 72   RKVFDGMAQPNAFVWNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAAF 131

Query: 710  GDLE---QGKVLHNYVVENNIVYDIFIGNALINMYSKCGNLETAVCVFRQMPDKDVFSWT 540
              L+    G  +H  V       D+F+ + L+N Y    ++E A  VF +M ++DV SWT
Sbjct: 132  AGLKWRSNGDAIHALVRRIGFTSDVFVMSGLVNYYGAFRSVEEASKVFEEMYERDVVSWT 191

Query: 539  TLVSGYVQGSKFKEALTLFEEMQMSGVEPNEVTLVSLLSACAQTGALDQGKWIHNYIEEH 360
            +++S   Q   + + L +  EMQ  G+ PN+VT++SLLSAC QT A+D+G+W++N + + 
Sbjct: 192  SMISACAQCGHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKF 251

Query: 359  SVRQDVCLGNALIDMYVKCGSIKSALQLFHRMHLKDTSSWNALMGGLAMHGHGREALILF 180
             +  DV + NALI MY KCG +  AL+ F  M  + T SWN L+ G   +   +EAL +F
Sbjct: 252  GIEADVDIRNALISMYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIF 311

Query: 179  SQMQRVGDTRPDCVTYANVLCACTHSGMVREGYHL 75
             +M   G T PD +T  +VL AC   G +R+G H+
Sbjct: 312  EEMLLHGVT-PDGITLVSVLSACAQLGELRKGMHV 345


>gb|ABR17838.1| unknown [Picea sitchensis]
          Length = 795

 Score =  350 bits (898), Expect = 4e-94
 Identities = 168/388 (43%), Positives = 247/388 (63%)
 Frame = -3

Query: 1166 RDIVSWTSMISGYAQLNCCDECFVLFDEMRRVSVEPNKITVVSLLSACGNVRDLDRGKWI 987
            RD+VSW ++I+GY+Q     E   LF EM+   ++PN  T+VS++  C ++  L++GK I
Sbjct: 184  RDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQI 243

Query: 986  HSYVFDNKMEGDIVVGNALVNMYAKCGCMSSALEVFRNISTANTVSWNVLIGGFSQNGFP 807
            H Y   + +E D++V N LVNMYAKCG +++A ++F  +   +  SWN +IGG+S N   
Sbjct: 244  HCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQH 303

Query: 806  SEALRLFHEMKKSDIRPNEITFVNTLSACAQLGDLEQGKVLHNYVVENNIVYDIFIGNAL 627
             EAL  F+ M+   I+PN IT V+ L ACA L  LEQG+ +H Y + +    +  +GNAL
Sbjct: 304  HEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNAL 363

Query: 626  INMYSKCGNLETAVCVFRQMPDKDVFSWTTLVSGYVQGSKFKEALTLFEEMQMSGVEPNE 447
            +NMY+KCGN+ +A  +F +MP K+V +W  ++SGY Q     EAL LF EMQ  G++P+ 
Sbjct: 364  VNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDS 423

Query: 446  VTLVSLLSACAQTGALDQGKWIHNYIEEHSVRQDVCLGNALIDMYVKCGSIKSALQLFHR 267
              +VS+L ACA   AL+QGK IH Y        +V +G  L+D+Y KCG++ +A +LF R
Sbjct: 424  FAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFER 483

Query: 266  MHLKDTSSWNALMGGLAMHGHGREALILFSQMQRVGDTRPDCVTYANVLCACTHSGMVRE 87
            M  +D  SW  ++    +HGHG +AL LFS+MQ  G T+ D + +  +L AC+H+G+V +
Sbjct: 484  MPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETG-TKLDHIAFTAILTACSHAGLVDQ 542

Query: 86   GYHLFNSMSSLYGITPTIEHYGCMVDLL 3
            G   F  M S YG+ P +EHY C+VDLL
Sbjct: 543  GLQYFQCMKSDYGLAPKLEHYACLVDLL 570



 Score =  313 bits (803), Expect = 4e-83
 Identities = 150/358 (41%), Positives = 220/358 (61%)
 Frame = -3

Query: 1157 VSWTSMISGYAQLNCCDECFVLFDEMRRVSVEPNKITVVSLLSACGNVRDLDRGKWIHSY 978
            V W   I GY +    ++   L+ +M+R  + P+K+  +S++ ACG+  DL  G+ +H  
Sbjct: 86   VVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVHED 145

Query: 977  VFDNKMEGDIVVGNALVNMYAKCGCMSSALEVFRNISTANTVSWNVLIGGFSQNGFPSEA 798
            +     E D++VG AL +MY KCG + +A +VF  +   + VSWN +I G+SQNG P EA
Sbjct: 146  IIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEA 205

Query: 797  LRLFHEMKKSDIRPNEITFVNTLSACAQLGDLEQGKVLHNYVVENNIVYDIFIGNALINM 618
            L LF EM+ + I+PN  T V+ +  CA L  LEQGK +H Y + + I  D+ + N L+NM
Sbjct: 206  LALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNM 265

Query: 617  YSKCGNLETAVCVFRQMPDKDVFSWTTLVSGYVQGSKFKEALTLFEEMQMSGVEPNEVTL 438
            Y+KCGN+ TA  +F +MP +DV SW  ++ GY   S+  EAL  F  MQ+ G++PN +T+
Sbjct: 266  YAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITM 325

Query: 437  VSLLSACAQTGALDQGKWIHNYIEEHSVRQDVCLGNALIDMYVKCGSIKSALQLFHRMHL 258
            VS+L ACA   AL+QG+ IH Y        +  +GNAL++MY KCG++ SA +LF RM  
Sbjct: 326  VSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPK 385

Query: 257  KDTSSWNALMGGLAMHGHGREALILFSQMQRVGDTRPDCVTYANVLCACTHSGMVREG 84
            K+  +WNA++ G + HGH  EAL LF +MQ  G  +PD     +VL AC H   + +G
Sbjct: 386  KNVVAWNAIISGYSQHGHPHEALALFIEMQAQG-IKPDSFAIVSVLPACAHFLALEQG 442



 Score =  229 bits (583), Expect = 1e-57
 Identities = 106/262 (40%), Positives = 170/262 (64%)
 Frame = -3

Query: 860 NTVSWNVLIGGFSQNGFPSEALRLFHEMKKSDIRPNEITFVNTLSACAQLGDLEQGKVLH 681
           N V W   I G+ +NGF ++ALRL+++M+++ I P+++ F++ + AC    DL+ G+ +H
Sbjct: 84  NAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVH 143

Query: 680 NYVVENNIVYDIFIGNALINMYSKCGNLETAVCVFRQMPDKDVFSWTTLVSGYVQGSKFK 501
             ++      D+ +G AL +MY+KCG+LE A  VF +MP +DV SW  +++GY Q  +  
Sbjct: 144 EDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPY 203

Query: 500 EALTLFEEMQMSGVEPNEVTLVSLLSACAQTGALDQGKWIHNYIEEHSVRQDVCLGNALI 321
           EAL LF EMQ++G++PN  TLVS++  CA   AL+QGK IH Y     +  DV + N L+
Sbjct: 204 EALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLV 263

Query: 320 DMYVKCGSIKSALQLFHRMHLKDTSSWNALMGGLAMHGHGREALILFSQMQRVGDTRPDC 141
           +MY KCG++ +A +LF RM ++D +SWNA++GG +++    EAL  F++MQ V   +P+ 
Sbjct: 264 NMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQ-VRGIKPNS 322

Query: 140 VTYANVLCACTHSGMVREGYHL 75
           +T  +VL AC H   + +G  +
Sbjct: 323 ITMVSVLPACAHLFALEQGQQI 344


>ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
            chloroplastic [Vitis vinifera]
          Length = 711

 Score =  347 bits (890), Expect = 3e-93
 Identities = 169/381 (44%), Positives = 248/381 (65%)
 Frame = -3

Query: 1145 SMISGYAQLNCCDECFVLFDEMRRVSVEPNKITVVSLLSACGNVRDLDRGKWIHSYVFDN 966
            S+I GY   N   +  + +  M    ++P++ T  SL  +CG    L  GK +H +    
Sbjct: 110  SIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGV---LCEGKQLHCHSTKL 166

Query: 965  KMEGDIVVGNALVNMYAKCGCMSSALEVFRNISTANTVSWNVLIGGFSQNGFPSEALRLF 786
                D  + N L+NMY+ CGC+ SA +VF  +   + VSW  +IG ++Q   P EA++LF
Sbjct: 167  GFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLF 226

Query: 785  HEMKKSDIRPNEITFVNTLSACAQLGDLEQGKVLHNYVVENNIVYDIFIGNALINMYSKC 606
              M+ + ++PNEIT VN L+ACA+  DLE  K +H Y+ E  I +   + +AL+++Y KC
Sbjct: 227  RRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKC 286

Query: 605  GNLETAVCVFRQMPDKDVFSWTTLVSGYVQGSKFKEALTLFEEMQMSGVEPNEVTLVSLL 426
            G    A  +F +MP+K++F W  +++G+V+ S ++EAL+LF EMQ+SGV+ ++VT+ SLL
Sbjct: 287  GCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLL 346

Query: 425  SACAQTGALDQGKWIHNYIEEHSVRQDVCLGNALIDMYVKCGSIKSALQLFHRMHLKDTS 246
             AC   GAL+ GKW+H YIE+  +  DV LG AL+DMY KCGSI+SA+++F  M  KD  
Sbjct: 347  IACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVM 406

Query: 245  SWNALMGGLAMHGHGREALILFSQMQRVGDTRPDCVTYANVLCACTHSGMVREGYHLFNS 66
            +W AL+ GLAM G G +AL LF +MQ + + +PD +T+  VL AC+H+G+V EG   FNS
Sbjct: 407  TWTALIVGLAMCGQGLKALELFHEMQ-MSEVKPDAITFVGVLAACSHAGLVNEGIAYFNS 465

Query: 65   MSSLYGITPTIEHYGCMVDLL 3
            M + YGI P+IEHYGCMVD+L
Sbjct: 466  MPNKYGIQPSIEHYGCMVDML 486



 Score =  229 bits (585), Expect = 8e-58
 Identities = 116/323 (35%), Positives = 193/323 (59%), Gaps = 2/323 (0%)
 Frame = -3

Query: 1166 RDIVSWTSMISGYAQLNCCDECFVLFDEMRRVSVEPNKITVVSLLSACGNVRDLDRGKWI 987
            + +VSW +MI  YAQ +   E   LF  M   SV+PN+IT+V++L+AC   RDL+  K +
Sbjct: 201  KSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQV 260

Query: 986  HSYVFDNKMEGDIVVGNALVNMYAKCGCMSSALEVFRNISTANTVSWNVLIGGFSQNGFP 807
            H Y+ +  +    V+ +AL+++Y KCGC   A ++F  +   N   WN++I G  ++   
Sbjct: 261  HKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDY 320

Query: 806  SEALRLFHEMKKSDIRPNEITFVNTLSACAQLGDLEQGKVLHNYVVENNIVYDIFIGNAL 627
             EAL LF+EM+ S ++ +++T  + L AC  LG LE GK LH Y+ +  I  D+ +G AL
Sbjct: 321  EEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTAL 380

Query: 626  INMYSKCGNLETAVCVFRQMPDKDVFSWTTLVSGYVQGSKFKEALTLFEEMQMSGVEPNE 447
            ++MY+KCG++E+A+ VF++MP+KDV +WT L+ G     +  +AL LF EMQMS V+P+ 
Sbjct: 381  VDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDA 440

Query: 446  VTLVSLLSACAQTGALDQG-KWIHNYIEEHSVRQDVCLGNALIDMYVKCGSIKSALQLFH 270
            +T V +L+AC+  G +++G  + ++   ++ ++  +     ++DM  + G I  A  L  
Sbjct: 441  ITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQ 500

Query: 269  RMHL-KDTSSWNALMGGLAMHGH 204
             M +  D      L+    +HG+
Sbjct: 501  NMPMAPDYFVLVGLLSACRIHGN 523



 Score =  100 bits (250), Expect = 5e-19
 Identities = 59/213 (27%), Positives = 108/213 (50%), Gaps = 2/213 (0%)
 Frame = -3

Query: 734 TLSACAQLGDLEQGKVLHNYVVENNIVYDIFIGNALINMYS--KCGNLETAVCVFRQMPD 561
           +L  C  +  L+Q   +H  ++   +  D F  + ++   +    G+L  A  VF Q+P+
Sbjct: 46  SLEKCTTMSQLKQ---IHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPN 102

Query: 560 KDVFSWTTLVSGYVQGSKFKEALTLFEEMQMSGVEPNEVTLVSLLSACAQTGALDQGKWI 381
              F+  +++ GY   +  ++A+  ++ M + G++P+  T  SL  +C   G L +GK +
Sbjct: 103 PTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSC---GVLCEGKQL 159

Query: 380 HNYIEEHSVRQDVCLGNALIDMYVKCGSIKSALQLFHRMHLKDTSSWNALMGGLAMHGHG 201
           H +  +     D  + N L++MY  CG + SA ++F +M  K   SW  ++G  A     
Sbjct: 160 HCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLP 219

Query: 200 REALILFSQMQRVGDTRPDCVTYANVLCACTHS 102
            EA+ LF +M+ +   +P+ +T  NVL AC  S
Sbjct: 220 HEAIKLFRRME-IASVKPNEITLVNVLTACARS 251