BLASTX nr result

ID: Coptis23_contig00023956 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023956
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280134.2| PREDICTED: desiccation-related protein PCC3-...    75   7e-12
emb|CBI30588.3| unnamed protein product [Vitis vinifera]               75   7e-12
ref|XP_003593602.1| Late embryogenesis abundant protein [Medicag...    67   2e-09
emb|CAF32327.1| late embryogenesis abundant protein [Pisum sativum]    66   3e-09
ref|XP_002305785.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09

>ref|XP_002280134.2| PREDICTED: desiccation-related protein PCC3-06-like [Vitis
           vinifera]
          Length = 270

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 40/67 (59%), Positives = 47/67 (70%), Gaps = 7/67 (10%)
 Frame = -3

Query: 293 KAKQGTYEAKETTSDVV-------GSVAETAEKLTEKAKQTMEGAWGAAKDTTQKIKETV 135
           KAKQG  +A ET   VV          AETA+ + EKAKQT++GAWGAAK+TTQKIKETV
Sbjct: 183 KAKQGASKATETVGAVVDKAKEGKSKAAETAQNIGEKAKQTVQGAWGAAKETTQKIKETV 242

Query: 134 VGKDDRK 114
           VGK + K
Sbjct: 243 VGKSEDK 249


>emb|CBI30588.3| unnamed protein product [Vitis vinifera]
          Length = 270

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 40/67 (59%), Positives = 47/67 (70%), Gaps = 7/67 (10%)
 Frame = -3

Query: 293 KAKQGTYEAKETTSDVV-------GSVAETAEKLTEKAKQTMEGAWGAAKDTTQKIKETV 135
           KAKQG  +A ET   VV          AETA+ + EKAKQT++GAWGAAK+TTQKIKETV
Sbjct: 183 KAKQGASKATETVGAVVDKAKEGKSKAAETAQNIGEKAKQTVQGAWGAAKETTQKIKETV 242

Query: 134 VGKDDRK 114
           VGK + K
Sbjct: 243 VGKSEDK 249


>ref|XP_003593602.1| Late embryogenesis abundant protein [Medicago truncatula]
           gi|355482650|gb|AES63853.1| Late embryogenesis abundant
           protein [Medicago truncatula]
          Length = 348

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 32/58 (55%), Positives = 38/58 (65%)
 Frame = -3

Query: 293 KAKQGTYEAKETTSDVVGSVAETAEKLTEKAKQTMEGAWGAAKDTTQKIKETVVGKDD 120
           K K+G  +  E T +V GS  E  +   E AK+T +GAW  AKD TQKIKETVVGKDD
Sbjct: 245 KTKEGAEKTAEKTGEVAGSATEALKSAGEMAKKTAQGAWETAKDATQKIKETVVGKDD 302


>emb|CAF32327.1| late embryogenesis abundant protein [Pisum sativum]
          Length = 358

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 31/56 (55%), Positives = 38/56 (67%)
 Frame = -3

Query: 287 KQGTYEAKETTSDVVGSVAETAEKLTEKAKQTMEGAWGAAKDTTQKIKETVVGKDD 120
           K+G  +  ETT +V G+  E  +   E AK+T +GAW  AKD TQKIKETVVGKDD
Sbjct: 254 KEGAEKTAETTGEVAGAATEALKSAGEMAKRTAQGAWETAKDATQKIKETVVGKDD 309


>ref|XP_002305785.1| predicted protein [Populus trichocarpa] gi|222848749|gb|EEE86296.1|
           predicted protein [Populus trichocarpa]
          Length = 232

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 35/65 (53%), Positives = 43/65 (66%), Gaps = 7/65 (10%)
 Frame = -3

Query: 293 KAKQGTYEAKETTS-------DVVGSVAETAEKLTEKAKQTMEGAWGAAKDTTQKIKETV 135
           KAK+GT  A  T         +  G V ET E + E AK+T++GAWGAA++TTQKIKET 
Sbjct: 146 KAKEGTERAAGTAGVAGDMAKEGAGKVVETVEIVGEMAKETVKGAWGAAEETTQKIKETA 205

Query: 134 VGKDD 120
           VGKDD
Sbjct: 206 VGKDD 210


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