BLASTX nr result

ID: Coptis23_contig00023953 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023953
         (534 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521480.1| PREDICTED: uncharacterized protein At5g41620...    75   5e-12
ref|XP_002275906.2| PREDICTED: uncharacterized protein At5g41620...    75   8e-12
emb|CAN66060.1| hypothetical protein VITISV_017038 [Vitis vinifera]    75   8e-12
ref|XP_003553612.1| PREDICTED: uncharacterized protein At5g41620...    72   7e-11
ref|XP_002272987.2| PREDICTED: uncharacterized protein At5g41620...    67   2e-09

>ref|XP_003521480.1| PREDICTED: uncharacterized protein At5g41620-like [Glycine max]
          Length = 660

 Score = 75.5 bits (184), Expect = 5e-12
 Identities = 41/88 (46%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
 Frame = -1

Query: 534 LERCTSDRIEWDFSAGNFAQ--DGYDQETYSKTEKQAHGKNRDIEKQRYKSIKDLRDYIL 361
           L+R  SD +EW   A       DG D E++ + EKQA GK    E Q YKS+K LRD IL
Sbjct: 539 LQRSISDGMEWGVQADKIQNSGDGIDWESFYELEKQAQGKGYADEMQGYKSVKGLRDQIL 598

Query: 360 SNSRLAPAHGFASPTKQWG*PNPGKALS 277
           + SRLA + G+ASPT+Q+  P P + L+
Sbjct: 599 AGSRLASSRGYASPTRQFSQPWPSRDLA 626


>ref|XP_002275906.2| PREDICTED: uncharacterized protein At5g41620-like [Vitis vinifera]
          Length = 693

 Score = 74.7 bits (182), Expect = 8e-12
 Identities = 38/79 (48%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
 Frame = -1

Query: 534 LERCTSDRIEWDFSAGNF--AQDGYDQETYSKTEKQAHGKNRDIEKQRYKSIKDLRDYIL 361
           L+R  SD I+W   + N   ++DG D   + + EK+A GK    E QRYKS+K LRD IL
Sbjct: 537 LQRSMSDGIDWGIQSENLQSSRDGLDWGRFYELEKEAQGKGYGDEMQRYKSVKGLRDQIL 596

Query: 360 SNSRLAPAHGFASPTKQWG 304
           + SR+  A  FASPT+QWG
Sbjct: 597 AGSRIGSARVFASPTRQWG 615


>emb|CAN66060.1| hypothetical protein VITISV_017038 [Vitis vinifera]
          Length = 577

 Score = 74.7 bits (182), Expect = 8e-12
 Identities = 38/79 (48%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
 Frame = -1

Query: 534 LERCTSDRIEWDFSAGNF--AQDGYDQETYSKTEKQAHGKNRDIEKQRYKSIKDLRDYIL 361
           L+R  SD I+W   + N   ++DG D   + + EK+A GK    E QRYKS+K LRD IL
Sbjct: 456 LQRSMSDGIDWGIQSENLQSSRDGLDWGRFYELEKEAQGKGYGDEMQRYKSVKGLRDQIL 515

Query: 360 SNSRLAPAHGFASPTKQWG 304
           + SR+  A  FASPT+QWG
Sbjct: 516 AGSRIGSARVFASPTRQWG 534


>ref|XP_003553612.1| PREDICTED: uncharacterized protein At5g41620-like [Glycine max]
          Length = 666

 Score = 71.6 bits (174), Expect = 7e-11
 Identities = 39/81 (48%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
 Frame = -1

Query: 534 LERCTSDRIEWDFSAGNFAQ--DGYDQETYSKTEKQAHGKNRDIEKQRYKSIKDLRDYIL 361
           L+R  SD +EW   A       DG D E++ + EKQA GK    E Q YKS+K LRD IL
Sbjct: 534 LQRSISDGMEWGVQADKLQNSGDGIDWESFYELEKQAQGKGYGDEMQGYKSVKGLRDQIL 593

Query: 360 SNSRLAPAHGFASPTKQWG*P 298
           + SRLA   G+ASPT+Q+  P
Sbjct: 594 AGSRLASYRGYASPTRQFSQP 614


>ref|XP_002272987.2| PREDICTED: uncharacterized protein At5g41620-like [Vitis vinifera]
          Length = 616

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 35/84 (41%), Positives = 55/84 (65%), Gaps = 3/84 (3%)
 Frame = -1

Query: 534 LERCTSDRIEWDFSAGNFAQDG---YDQETYSKTEKQAHGKNRDIEKQRYKSIKDLRDYI 364
           LER TS+ +EWDF   N +Q+    +D+    + + +A  K+ + E +RYKS+K LRD+I
Sbjct: 495 LERVTSNGMEWDFD--NISQENSYAFDKGRTPEHDSEARRKDYEDEIKRYKSVKGLRDHI 552

Query: 363 LSNSRLAPAHGFASPTKQWG*PNP 292
           LS S+++   GFASPT++W   +P
Sbjct: 553 LSGSKVSSIQGFASPTRKWEQASP 576


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