BLASTX nr result

ID: Coptis23_contig00023949 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023949
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284038.1| PREDICTED: UPF0497 membrane protein 14 [Viti...    90   2e-16
emb|CAN71023.1| hypothetical protein VITISV_012198 [Vitis vinifera]    90   2e-16
ref|XP_002515986.1| conserved hypothetical protein [Ricinus comm...    79   5e-13
ref|XP_002304215.1| predicted protein [Populus trichocarpa] gi|2...    75   6e-12
ref|XP_003530122.1| PREDICTED: CASP-like protein POPTRDRAFT_5537...    68   9e-10

>ref|XP_002284038.1| PREDICTED: UPF0497 membrane protein 14 [Vitis vinifera]
           gi|226713186|sp|A7P756.1|CSPLD_VITVI RecName:
           Full=CASP-like protein GSVIVT00034332001
          Length = 210

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 48/89 (53%), Positives = 63/89 (70%)
 Frame = +3

Query: 3   QMPETKVSATESVTMSGPLMSNAADRKLLRKTDVAHXXXXXXXXXXXXXAVAVMATSEEK 182
           Q+PE KV+A E+ TMSGPL+   +DR + R TDVAH             A+++MAT++E 
Sbjct: 13  QLPEAKVAA-ETGTMSGPLVPPRSDRSVRRGTDVAHVVLRFVCLLTSVIALSLMATAKEA 71

Query: 183 ANITIYGFSLPVYSKWSFAPSFEYLVGMS 269
           A+I+IYGF LPV SKWSF+ SFEYLVG+S
Sbjct: 72  ASISIYGFLLPVSSKWSFSDSFEYLVGVS 100


>emb|CAN71023.1| hypothetical protein VITISV_012198 [Vitis vinifera]
          Length = 210

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 48/89 (53%), Positives = 63/89 (70%)
 Frame = +3

Query: 3   QMPETKVSATESVTMSGPLMSNAADRKLLRKTDVAHXXXXXXXXXXXXXAVAVMATSEEK 182
           Q+PE KV+A E+ TMSGPL+   +DR + R TDVAH             A+++MAT++E 
Sbjct: 13  QLPEAKVAA-ETGTMSGPLVPPRSDRSVRRGTDVAHVVLRFVCLLTSVIALSLMATAKEA 71

Query: 183 ANITIYGFSLPVYSKWSFAPSFEYLVGMS 269
           A+I+IYGF LPV SKWSF+ SFEYLVG+S
Sbjct: 72  ASISIYGFLLPVSSKWSFSDSFEYLVGVS 100


>ref|XP_002515986.1| conserved hypothetical protein [Ricinus communis]
           gi|288558963|sp|B9RQG7.1|CSPLF_RICCO RecName:
           Full=CASP-like protein RCOM_1491260
           gi|223544891|gb|EEF46406.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 214

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 44/91 (48%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
 Frame = +3

Query: 3   QMPETKVSATES-VTMSGPLMSNAADRKLL-RKTDVAHXXXXXXXXXXXXXAVAVMATSE 176
           Q+PE+KV+ATE+  TMSGPL+      K   RK DV H             AV+ M T+ 
Sbjct: 12  QLPESKVAATENNETMSGPLVVGGGVAKPFGRKADVMHVILRLLCTITSVTAVSFMVTAH 71

Query: 177 EKANITIYGFSLPVYSKWSFAPSFEYLVGMS 269
           + + ++IYGF LPV SKWSF+ SFEYLVG+S
Sbjct: 72  QSSTVSIYGFMLPVRSKWSFSHSFEYLVGVS 102


>ref|XP_002304215.1| predicted protein [Populus trichocarpa]
           gi|288559104|sp|B9GXD6.1|CSPLO_POPTR RecName:
           Full=CASP-like protein POPTRDRAFT_553757
           gi|222841647|gb|EEE79194.1| predicted protein [Populus
           trichocarpa]
          Length = 222

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 44/96 (45%), Positives = 59/96 (61%), Gaps = 7/96 (7%)
 Frame = +3

Query: 3   QMPETKVSATE-SVTMSGPLM------SNAADRKLLRKTDVAHXXXXXXXXXXXXXAVAV 161
           Q+PE+KV+A   S TMSGPL+      + AA R   RK +V H             A++ 
Sbjct: 15  QLPESKVAADNISGTMSGPLVGASGGGTTAAMRPFGRKAEVMHVLLRLLCIITSVAALSF 74

Query: 162 MATSEEKANITIYGFSLPVYSKWSFAPSFEYLVGMS 269
           M T+++ + I+IYGF LPV SKWSF+ SFEYLVG+S
Sbjct: 75  MFTAQQSSTISIYGFMLPVQSKWSFSHSFEYLVGVS 110


>ref|XP_003530122.1| PREDICTED: CASP-like protein POPTRDRAFT_553757-like [Glycine max]
          Length = 208

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 37/89 (41%), Positives = 56/89 (62%), Gaps = 3/89 (3%)
 Frame = +3

Query: 12  ETKVSATE-SVTMSGPLMSNAADR--KLLRKTDVAHXXXXXXXXXXXXXAVAVMATSEEK 182
           E KV+A E S TMSGPL+  AA    +  R+ +                A+++M T++E 
Sbjct: 10  EAKVAALECSGTMSGPLVGAAASAGTRRRRRAEAMQLVLRALCMASSVVAISLMVTAKES 69

Query: 183 ANITIYGFSLPVYSKWSFAPSFEYLVGMS 269
           ++++IYGF LP++SKWSF+ S+EYLVG+S
Sbjct: 70  SSVSIYGFLLPLHSKWSFSESYEYLVGVS 98


Top