BLASTX nr result

ID: Coptis23_contig00023948 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023948
         (1283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282953.2| PREDICTED: probable homogentisate phytyltran...   286   6e-75
emb|CBI21093.3| unnamed protein product [Vitis vinifera]              286   6e-75
gb|ADG26667.1| homogentisate geranylgeranyl transferase [Coriand...   284   4e-74
gb|ACB42448.1| homogentisate geranylgeranyl transferase [Angelic...   272   1e-70
ref|XP_002324898.1| predicted protein [Populus trichocarpa] gi|2...   267   4e-69

>ref|XP_002282953.2| PREDICTED: probable homogentisate phytyltransferase 1,
            chloroplastic-like [Vitis vinifera]
          Length = 397

 Score =  286 bits (733), Expect = 6e-75
 Identities = 139/282 (49%), Positives = 193/282 (68%)
 Frame = +2

Query: 383  MSKQFYALYKFSRPYTIVATVMGITSASLLPLHSVSDLSPTFFVGLLKALVPMVLMNIYM 562
            +SKQ  A Y FSRP+TI+ TV+GITS SLLPL ++SDLSP FFVGLLKA+VP VLMNIY+
Sbjct: 97   VSKQLRAFYLFSRPHTIIGTVIGITSVSLLPLETISDLSPAFFVGLLKAMVPSVLMNIYV 156

Query: 563  VGINDIFDIEIDMINKPNLPLVSGELSLKAGXXXXXXXXXXXXXMGVMFKSPPLLCSVFL 742
            VG+N IFD+EID +NKP LPL SG+ S++ G             MG+MF+SPPL C++ +
Sbjct: 157  VGLNQIFDVEIDKVNKPELPLASGDFSMETGSQIVFISLLMSVGMGIMFQSPPLFCALLI 216

Query: 743  IFLISTAYSVDHPLLRWKKHAVLTLFCGVFVRAILIPICMFSHMQKYVLGRPLVFTKPLI 922
             FL+ TAYS++ PLLRWK++ +L   C + VRAI++ +  F+H+QK+VLGR +V+TK ++
Sbjct: 217  SFLLGTAYSIEIPLLRWKRYPLLAASCILIVRAIVVQLAFFAHIQKHVLGRSIVYTKSVV 276

Query: 923  FTXXXXXXXXXXXXXXXXXPDEDGDKAFGLRSPSMMLGKEKVFWSSVYILSLTYACAAVV 1102
            F                  PD DGD+ FG++S ++ LG++KVFW  V +L + Y  A V+
Sbjct: 277  FGVAFMCFFSTVIALFKDIPDVDGDREFGIQSFTVKLGQKKVFWLCVNMLLMAYGAATVI 336

Query: 1103 GATSSFVPNKIIMVLGHGILASILWIRAKSVNISDNAATFAF 1228
            GA+SS +P K   V  H  LA +LW+RA+SV++S   A  +F
Sbjct: 337  GASSSSMPIKFATVFCHCALALVLWVRAQSVDLSSKEAVTSF 378


>emb|CBI21093.3| unnamed protein product [Vitis vinifera]
          Length = 398

 Score =  286 bits (733), Expect = 6e-75
 Identities = 139/282 (49%), Positives = 193/282 (68%)
 Frame = +2

Query: 383  MSKQFYALYKFSRPYTIVATVMGITSASLLPLHSVSDLSPTFFVGLLKALVPMVLMNIYM 562
            +SKQ  A Y FSRP+TI+ TV+GITS SLLPL ++SDLSP FFVGLLKA+VP VLMNIY+
Sbjct: 73   VSKQLRAFYLFSRPHTIIGTVIGITSVSLLPLETISDLSPAFFVGLLKAMVPSVLMNIYV 132

Query: 563  VGINDIFDIEIDMINKPNLPLVSGELSLKAGXXXXXXXXXXXXXMGVMFKSPPLLCSVFL 742
            VG+N IFD+EID +NKP LPL SG+ S++ G             MG+MF+SPPL C++ +
Sbjct: 133  VGLNQIFDVEIDKVNKPELPLASGDFSMETGSQIVFISLLMSVGMGIMFQSPPLFCALLI 192

Query: 743  IFLISTAYSVDHPLLRWKKHAVLTLFCGVFVRAILIPICMFSHMQKYVLGRPLVFTKPLI 922
             FL+ TAYS++ PLLRWK++ +L   C + VRAI++ +  F+H+QK+VLGR +V+TK ++
Sbjct: 193  SFLLGTAYSIEIPLLRWKRYPLLAASCILIVRAIVVQLAFFAHIQKHVLGRSIVYTKSVV 252

Query: 923  FTXXXXXXXXXXXXXXXXXPDEDGDKAFGLRSPSMMLGKEKVFWSSVYILSLTYACAAVV 1102
            F                  PD DGD+ FG++S ++ LG++KVFW  V +L + Y  A V+
Sbjct: 253  FGVAFMCFFSTVIALFKDIPDVDGDREFGIQSFTVKLGQKKVFWLCVNMLLMAYGAATVI 312

Query: 1103 GATSSFVPNKIIMVLGHGILASILWIRAKSVNISDNAATFAF 1228
            GA+SS +P K   V  H  LA +LW+RA+SV++S   A  +F
Sbjct: 313  GASSSSMPIKFATVFCHCALALVLWVRAQSVDLSSKEAVTSF 354


>gb|ADG26667.1| homogentisate geranylgeranyl transferase [Coriandrum sativum]
          Length = 401

 Score =  284 bits (726), Expect = 4e-74
 Identities = 140/294 (47%), Positives = 192/294 (65%)
 Frame = +2

Query: 401  ALYKFSRPYTIVATVMGITSASLLPLHSVSDLSPTFFVGLLKALVPMVLMNIYMVGINDI 580
            A Y+FSRP+TI+ T++GITS SLLPL S+ DLSP FFVG LKAL+P + MNIY+VG+N +
Sbjct: 107  AFYRFSRPHTIIGTIIGITSVSLLPLTSIGDLSPAFFVGYLKALIPSIFMNIYVVGLNQL 166

Query: 581  FDIEIDMINKPNLPLVSGELSLKAGXXXXXXXXXXXXXMGVMFKSPPLLCSVFLIFLIST 760
            FD+EID +NKPNLPL SGE S+  G             MG++F+SPP+  ++ + FL  +
Sbjct: 167  FDVEIDKVNKPNLPLASGEYSMGLGKAIVSAFGLMSFAMGIVFQSPPVFFALLICFLFGS 226

Query: 761  AYSVDHPLLRWKKHAVLTLFCGVFVRAILIPICMFSHMQKYVLGRPLVFTKPLIFTXXXX 940
            AYSV+ PLLRWK++A L  F  + VRAI + +  F H+QKYVLGRP+VF + L F     
Sbjct: 227  AYSVELPLLRWKRNAFLAAFSILMVRAITVNLAFFYHIQKYVLGRPMVFPRSLCFATVCI 286

Query: 941  XXXXXXXXXXXXXPDEDGDKAFGLRSPSMMLGKEKVFWSSVYILSLTYACAAVVGATSSF 1120
                         PD DGD+ FG++S S+ LG+++VFW  + IL + YA A V+GA+SSF
Sbjct: 287  SMFTTVIALFKDIPDVDGDRDFGIQSFSVCLGQKRVFWLCIGILLIAYASALVIGASSSF 346

Query: 1121 VPNKIIMVLGHGILASILWIRAKSVNISDNAATFAFXXXXXXXXXXXXXXXPFI 1282
            + +K++ V+GH  LASILW RA SVN+ DN++  +F               PF+
Sbjct: 347  LLSKLVTVIGHCTLASILWRRANSVNLEDNSSMTSFYMSIWKLFYAEYLLIPFV 400


>gb|ACB42448.1| homogentisate geranylgeranyl transferase [Angelica gigas]
          Length = 317

 Score =  272 bits (696), Expect = 1e-70
 Identities = 134/314 (42%), Positives = 197/314 (62%)
 Frame = +2

Query: 341  EGSVQEESISSWDKMSKQFYALYKFSRPYTIVATVMGITSASLLPLHSVSDLSPTFFVGL 520
            + + QE S      + ++  A Y+F+RP+TI+ +++GITS SLLPL S  DLSP FFVGL
Sbjct: 3    QANKQEVSPPLSQNLWRKVDAFYRFTRPHTIIGSIVGITSVSLLPLVSFEDLSPAFFVGL 62

Query: 521  LKALVPMVLMNIYMVGINDIFDIEIDMINKPNLPLVSGELSLKAGXXXXXXXXXXXXXMG 700
            LK ++P+V +NIY+VG+N ++D+EID +NKPNLP+ SGE S++ G             MG
Sbjct: 63   LKVMIPIVCVNIYVVGLNQLYDVEIDKVNKPNLPIASGEYSMETGKAIVSAFGLMSIIMG 122

Query: 701  VMFKSPPLLCSVFLIFLISTAYSVDHPLLRWKKHAVLTLFCGVFVRAILIPICMFSHMQK 880
            +MF+SPP+L  + + F   TAYS+D PL RWKK+A L   C V VRAI + + +F H+Q+
Sbjct: 123  IMFQSPPVLYCLLVCFFFGTAYSIDVPLFRWKKNAFLAAMCIVIVRAITVQLTVFYHIQQ 182

Query: 881  YVLGRPLVFTKPLIFTXXXXXXXXXXXXXXXXXPDEDGDKAFGLRSPSMMLGKEKVFWSS 1060
            YVLGRP++F++ L F                  PD DGD+ FG+++ ++ LGK++VFW  
Sbjct: 183  YVLGRPVLFSRSLAFAIICMTLFVTVIALFKDIPDVDGDRDFGIQTITVTLGKKRVFWLC 242

Query: 1061 VYILSLTYACAAVVGATSSFVPNKIIMVLGHGILASILWIRAKSVNISDNAATFAFXXXX 1240
            + IL + Y  A V+G++SS + +K++ V GH ILASILW RA SV++  N +  +F    
Sbjct: 243  ITILLIAYGSAVVIGSSSSLLLSKLVTVTGHCILASILWSRAISVDLESNKSITSFYMFI 302

Query: 1241 XXXXXXXXXXXPFI 1282
                       PF+
Sbjct: 303  WKLFYAEYLLIPFV 316


>ref|XP_002324898.1| predicted protein [Populus trichocarpa] gi|222866332|gb|EEF03463.1|
            predicted protein [Populus trichocarpa]
          Length = 284

 Score =  267 bits (683), Expect = 4e-69
 Identities = 128/277 (46%), Positives = 187/277 (67%)
 Frame = +2

Query: 398  YALYKFSRPYTIVATVMGITSASLLPLHSVSDLSPTFFVGLLKALVPMVLMNIYMVGIND 577
            ++ Y+FSRP+T++ T++GITS SLLP+ ++S+LSPTFF+GLLKALVP VLMNIY+VG+N 
Sbjct: 2    HSFYQFSRPHTVIGTLIGITSVSLLPVETISELSPTFFMGLLKALVPSVLMNIYVVGLNQ 61

Query: 578  IFDIEIDMINKPNLPLVSGELSLKAGXXXXXXXXXXXXXMGVMFKSPPLLCSVFLIFLIS 757
            +FD+EID +NKP LPL SG+ S+  G             MG+MF+SP L  ++ +  ++ 
Sbjct: 62   LFDVEIDKVNKPYLPLASGDFSMGTGVAIVSASLLASFAMGIMFQSPLLFSALLISCVLG 121

Query: 758  TAYSVDHPLLRWKKHAVLTLFCGVFVRAILIPICMFSHMQKYVLGRPLVFTKPLIFTXXX 937
            + YS++ P LRWKK A L   C + VRAI++ +  F HMQK+VLG+  V T+ L+F    
Sbjct: 122  SVYSIELPFLRWKKQAFLAATCIMIVRAIVVQLAFFVHMQKFVLGKTTVVTRSLVFATAF 181

Query: 938  XXXXXXXXXXXXXXPDEDGDKAFGLRSPSMMLGKEKVFWSSVYILSLTYACAAVVGATSS 1117
                          PD DGD+ +G++S S+ LG+E+VFW  V +L + Y  A VVGA+S+
Sbjct: 182  MCFFSAVIALFKDIPDVDGDRDYGIQSFSVSLGQERVFWLCVNMLLIAYGAAVVVGASST 241

Query: 1118 FVPNKIIMVLGHGILASILWIRAKSVNISDNAATFAF 1228
            F+P+K I +LGH  LA ILW+RA+SV+++   +  +F
Sbjct: 242  FLPSKFITILGHCTLAFILWLRARSVDLTSKDSITSF 278


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