BLASTX nr result

ID: Coptis23_contig00023944 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023944
         (829 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303714.1| cationic amino acid transporter [Populus tri...   407   e-111
gb|ADB92669.1| cationic amino acid transporter 5 [Populus tremul...   403   e-110
emb|CBI27231.3| unnamed protein product [Vitis vinifera]              402   e-110
ref|XP_002273828.1| PREDICTED: uncharacterized amino acid permea...   402   e-110
ref|XP_004145133.1| PREDICTED: cationic amino acid transporter 5...   399   e-109

>ref|XP_002303714.1| cationic amino acid transporter [Populus trichocarpa]
           gi|222841146|gb|EEE78693.1| cationic amino acid
           transporter [Populus trichocarpa]
          Length = 583

 Score =  407 bits (1045), Expect = e-111
 Identities = 208/275 (75%), Positives = 229/275 (83%)
 Frame = -3

Query: 827 LLESVVGGAAVARAWTSYFSTLLNRPTNSLRIQTNLAEDFSLLDPXXXXXXXXXXXXXXX 648
           LLES+ G AAVARAWTSYF+ LLNRP+NSLRI TNLAE F+LLDP               
Sbjct: 156 LLESIAGSAAVARAWTSYFTNLLNRPSNSLRIHTNLAEGFNLLDPIAVGVLVIAATIAII 215

Query: 647 XXXXTSYLNWIASAINTVVILFVIVAGFAHADSSNLKPFTPYGAEGIFRAAAIVYFAYGG 468
               TS +NWIA+A+NT VILFVI+AGFAHA++SNLKPF P+GA+GIF+AAAIVYFAYGG
Sbjct: 216 STRKTSLINWIATALNTAVILFVIIAGFAHANTSNLKPFLPFGAKGIFQAAAIVYFAYGG 275

Query: 467 FDNIATMAEETRNPSRDIPIGLLGSMSIITVIYCLMALSLSMMQKYTDIDRNTAYSIAFQ 288
           FDNIATMAEET+NPSRDIPIGLLGSMSIITVIYCLMAL+LSMMQKYT+ID+  AYS+AFQ
Sbjct: 276 FDNIATMAEETKNPSRDIPIGLLGSMSIITVIYCLMALTLSMMQKYTEIDKGAAYSVAFQ 335

Query: 287 AVGMKWAKYLVALGALKGMTTVLLIGALGQARYTTHIARAHMIPPWFALVHPKTRTPINA 108
           +VGM WA+YLVALGALKGMTTVLL+GALGQARYTTHIARAHMIPPWFALVHPKT TPINA
Sbjct: 336 SVGMNWARYLVALGALKGMTTVLLVGALGQARYTTHIARAHMIPPWFALVHPKTGTPINA 395

Query: 107 TLLITIPSACIAFXXXXXXXXXXXXXSTLFIFMMM 3
           TLLITI SA IAF             STLFIFMMM
Sbjct: 396 TLLITISSALIAFFSSLDVLASLLSVSTLFIFMMM 430


>gb|ADB92669.1| cationic amino acid transporter 5 [Populus tremula x Populus alba]
          Length = 589

 Score =  403 bits (1036), Expect = e-110
 Identities = 206/275 (74%), Positives = 228/275 (82%)
 Frame = -3

Query: 827 LLESVVGGAAVARAWTSYFSTLLNRPTNSLRIQTNLAEDFSLLDPXXXXXXXXXXXXXXX 648
           LLES+ G AAVARAWTSYF+ LLN P+NSLRI TNLAE F+LLDP               
Sbjct: 162 LLESIAGSAAVARAWTSYFTNLLNLPSNSLRIHTNLAEGFNLLDPIAVGVLVIAATIAII 221

Query: 647 XXXXTSYLNWIASAINTVVILFVIVAGFAHADSSNLKPFTPYGAEGIFRAAAIVYFAYGG 468
               TS +NWIA+A+NT VILFVI+AGFAHA++SNLKPF P+GA+GIF+AAAIVYFAYGG
Sbjct: 222 STRKTSLINWIATALNTAVILFVIIAGFAHANTSNLKPFFPFGAKGIFQAAAIVYFAYGG 281

Query: 467 FDNIATMAEETRNPSRDIPIGLLGSMSIITVIYCLMALSLSMMQKYTDIDRNTAYSIAFQ 288
           FDNIATMAEET+NPSRDIPIGLLGSMSIITVIYCLMAL+LSMMQKYT+ID+  AYS+AFQ
Sbjct: 282 FDNIATMAEETKNPSRDIPIGLLGSMSIITVIYCLMALTLSMMQKYTEIDKGAAYSVAFQ 341

Query: 287 AVGMKWAKYLVALGALKGMTTVLLIGALGQARYTTHIARAHMIPPWFALVHPKTRTPINA 108
           +VGM WA+YLVALGALKGMTTVLL+GALGQARYTTHIARAHMIPPWFALVHPKT TPINA
Sbjct: 342 SVGMNWARYLVALGALKGMTTVLLVGALGQARYTTHIARAHMIPPWFALVHPKTGTPINA 401

Query: 107 TLLITIPSACIAFXXXXXXXXXXXXXSTLFIFMMM 3
           TLLITI SA IAF             STLF+FMMM
Sbjct: 402 TLLITISSALIAFFSSLDVLASLLSVSTLFVFMMM 436


>emb|CBI27231.3| unnamed protein product [Vitis vinifera]
          Length = 702

 Score =  402 bits (1033), Expect = e-110
 Identities = 208/275 (75%), Positives = 224/275 (81%)
 Frame = -3

Query: 827  LLESVVGGAAVARAWTSYFSTLLNRPTNSLRIQTNLAEDFSLLDPXXXXXXXXXXXXXXX 648
            LLES+VG A VARAWTSYF+TLLNRPTNSLRI TNL + ++LLDP               
Sbjct: 277  LLESIVGSAGVARAWTSYFTTLLNRPTNSLRIHTNLTKGYNLLDPIAVAVLAIAATLAMI 336

Query: 647  XXXXTSYLNWIASAINTVVILFVIVAGFAHADSSNLKPFTPYGAEGIFRAAAIVYFAYGG 468
                TS  NWIASAINTVVILFVI+AGFA+AD SNL PF PYGA+GIF+AAAIVYFAYGG
Sbjct: 337  STRKTSVFNWIASAINTVVILFVIIAGFANADPSNLTPFLPYGAKGIFQAAAIVYFAYGG 396

Query: 467  FDNIATMAEETRNPSRDIPIGLLGSMSIITVIYCLMALSLSMMQKYTDIDRNTAYSIAFQ 288
            FDNIATMAEET+NPSRDIP+GLLGSMSIITVIYCLMAL+LSMMQ Y DIDR  AYS+AFQ
Sbjct: 397  FDNIATMAEETKNPSRDIPLGLLGSMSIITVIYCLMALALSMMQDYRDIDRQAAYSLAFQ 456

Query: 287  AVGMKWAKYLVALGALKGMTTVLLIGALGQARYTTHIARAHMIPPWFALVHPKTRTPINA 108
            +VGMKWAKYLVALGALKGMTTVLL+GALGQARY THIARAHMIPPWFALVHPKT TPINA
Sbjct: 457  SVGMKWAKYLVALGALKGMTTVLLVGALGQARYVTHIARAHMIPPWFALVHPKTGTPINA 516

Query: 107  TLLITIPSACIAFXXXXXXXXXXXXXSTLFIFMMM 3
            TLLI I SA IAF             STLF+FMMM
Sbjct: 517  TLLIVISSALIAFFSSLDVLASLLSVSTLFVFMMM 551


>ref|XP_002273828.1| PREDICTED: uncharacterized amino acid permease YfnA [Vitis
           vinifera]
          Length = 589

 Score =  402 bits (1033), Expect = e-110
 Identities = 208/275 (75%), Positives = 224/275 (81%)
 Frame = -3

Query: 827 LLESVVGGAAVARAWTSYFSTLLNRPTNSLRIQTNLAEDFSLLDPXXXXXXXXXXXXXXX 648
           LLES+VG A VARAWTSYF+TLLNRPTNSLRI TNL + ++LLDP               
Sbjct: 162 LLESIVGSAGVARAWTSYFTTLLNRPTNSLRIHTNLTKGYNLLDPIAVAVLAIAATLAMI 221

Query: 647 XXXXTSYLNWIASAINTVVILFVIVAGFAHADSSNLKPFTPYGAEGIFRAAAIVYFAYGG 468
               TS  NWIASAINTVVILFVI+AGFA+AD SNL PF PYGA+GIF+AAAIVYFAYGG
Sbjct: 222 STRKTSVFNWIASAINTVVILFVIIAGFANADPSNLTPFLPYGAKGIFQAAAIVYFAYGG 281

Query: 467 FDNIATMAEETRNPSRDIPIGLLGSMSIITVIYCLMALSLSMMQKYTDIDRNTAYSIAFQ 288
           FDNIATMAEET+NPSRDIP+GLLGSMSIITVIYCLMAL+LSMMQ Y DIDR  AYS+AFQ
Sbjct: 282 FDNIATMAEETKNPSRDIPLGLLGSMSIITVIYCLMALALSMMQDYRDIDRQAAYSLAFQ 341

Query: 287 AVGMKWAKYLVALGALKGMTTVLLIGALGQARYTTHIARAHMIPPWFALVHPKTRTPINA 108
           +VGMKWAKYLVALGALKGMTTVLL+GALGQARY THIARAHMIPPWFALVHPKT TPINA
Sbjct: 342 SVGMKWAKYLVALGALKGMTTVLLVGALGQARYVTHIARAHMIPPWFALVHPKTGTPINA 401

Query: 107 TLLITIPSACIAFXXXXXXXXXXXXXSTLFIFMMM 3
           TLLI I SA IAF             STLF+FMMM
Sbjct: 402 TLLIVISSALIAFFSSLDVLASLLSVSTLFVFMMM 436


>ref|XP_004145133.1| PREDICTED: cationic amino acid transporter 5-like [Cucumis sativus]
           gi|449474435|ref|XP_004154172.1| PREDICTED: cationic
           amino acid transporter 5-like [Cucumis sativus]
           gi|449503347|ref|XP_004161957.1| PREDICTED: cationic
           amino acid transporter 5-like [Cucumis sativus]
          Length = 588

 Score =  399 bits (1025), Expect = e-109
 Identities = 204/275 (74%), Positives = 225/275 (81%)
 Frame = -3

Query: 827 LLESVVGGAAVARAWTSYFSTLLNRPTNSLRIQTNLAEDFSLLDPXXXXXXXXXXXXXXX 648
           LLES+VG AAVAR+WTSYF++LL+RP  SL I TNL + ++LLDP               
Sbjct: 160 LLESIVGTAAVARSWTSYFTSLLDRPDKSLLIHTNLKDGYNLLDPIAVAVLAIAATIAMT 219

Query: 647 XXXXTSYLNWIASAINTVVILFVIVAGFAHADSSNLKPFTPYGAEGIFRAAAIVYFAYGG 468
               TSYLNWIASAINTVVILFVI+AGF HAD SNL PFTP+G +GIF+AAAIVYFAYGG
Sbjct: 220 STRKTSYLNWIASAINTVVILFVIIAGFIHADKSNLTPFTPFGVKGIFQAAAIVYFAYGG 279

Query: 467 FDNIATMAEETRNPSRDIPIGLLGSMSIITVIYCLMALSLSMMQKYTDIDRNTAYSIAFQ 288
           FDNIATMAEET+NPS+DIP+GLLGSMSIITVIYCLMALSLSMMQKYTDI+ + AYS+AF+
Sbjct: 280 FDNIATMAEETKNPSKDIPLGLLGSMSIITVIYCLMALSLSMMQKYTDINPDAAYSVAFE 339

Query: 287 AVGMKWAKYLVALGALKGMTTVLLIGALGQARYTTHIARAHMIPPWFALVHPKTRTPINA 108
            VGMKWAKYLVALGALKGMTTVLL+GALGQARYTTHIARAHMIPPWFALVHPKT TPINA
Sbjct: 340 RVGMKWAKYLVALGALKGMTTVLLVGALGQARYTTHIARAHMIPPWFALVHPKTGTPINA 399

Query: 107 TLLITIPSACIAFXXXXXXXXXXXXXSTLFIFMMM 3
           TLLI I S CIAF             STLF+FMMM
Sbjct: 400 TLLIAITSGCIAFFSSLDVLASLLSVSTLFVFMMM 434


Top