BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023939
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309075.1| predicted protein [Populus trichocarpa] gi|1...    80   2e-13
gb|AEV41138.1| D7-type cyclin [Populus x canadensis]                   79   4e-13
ref|XP_002531552.1| cyclin d, putative [Ricinus communis] gi|223...    78   9e-13
ref|XP_002271184.2| PREDICTED: putative cyclin-D7-1-like [Vitis ...    75   6e-12
ref|XP_003522122.1| PREDICTED: putative cyclin-D7-1-like [Glycin...    67   1e-09

>ref|XP_002309075.1| predicted protein [Populus trichocarpa]
           gi|159025740|emb|CAN88869.1| D7-type cyclin [Populus
           trichocarpa] gi|222855051|gb|EEE92598.1| predicted
           protein [Populus trichocarpa]
          Length = 356

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 40/78 (51%), Positives = 51/78 (65%)
 Frame = -1

Query: 234 IKYASRLDLGSQTVFNAVNYFDRFISTNKCNIEVAGFVQLLSVACLSISAKFGEVSIPQM 55
           IK   RL L  +TVFNA NY DRF+S N+C+      V+LL VACLS+++KF E   P +
Sbjct: 85  IKSRERLSLSFETVFNAANYLDRFMSMNQCHGWKCWMVELLCVACLSVASKFTETRTPCL 144

Query: 54  HEFQMDDQDDSVQASTIQ 1
           H+ QM+D D S Q  TIQ
Sbjct: 145 HDIQMEDLDHSFQPITIQ 162


>gb|AEV41138.1| D7-type cyclin [Populus x canadensis]
          Length = 356

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 40/78 (51%), Positives = 51/78 (65%)
 Frame = -1

Query: 234 IKYASRLDLGSQTVFNAVNYFDRFISTNKCNIEVAGFVQLLSVACLSISAKFGEVSIPQM 55
           IK   RL L  +TVFNA NY DRF+S N+C+      V+LL VACLS+++KF E   P +
Sbjct: 85  IKSRQRLSLPFETVFNAANYLDRFMSMNQCHGWKCWMVELLCVACLSVASKFTETRTPCL 144

Query: 54  HEFQMDDQDDSVQASTIQ 1
           H+ QM+D D S Q  TIQ
Sbjct: 145 HDIQMEDLDHSFQPITIQ 162


>ref|XP_002531552.1| cyclin d, putative [Ricinus communis] gi|223528813|gb|EEF30818.1|
           cyclin d, putative [Ricinus communis]
          Length = 349

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 42/79 (53%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
 Frame = -1

Query: 234 IKYASRLDLGSQTVFNAVNYFDRFISTNKCNIEVAGFVQLLSVACLSISAKFGEVS-IPQ 58
           IK  SRL+L  +T+FNA NY DRFIS NKC       V+LLSVACLS+++KF E +  P 
Sbjct: 86  IKSRSRLNLSFETLFNAANYLDRFISLNKCLEWKNWMVELLSVACLSVASKFSESTYAPS 145

Query: 57  MHEFQMDDQDDSVQASTIQ 1
           + E QM+D D + Q+ TIQ
Sbjct: 146 LLEIQMEDMDHTFQSITIQ 164


>ref|XP_002271184.2| PREDICTED: putative cyclin-D7-1-like [Vitis vinifera]
           gi|297740336|emb|CBI30518.3| unnamed protein product
           [Vitis vinifera]
          Length = 338

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 40/78 (51%), Positives = 53/78 (67%)
 Frame = -1

Query: 234 IKYASRLDLGSQTVFNAVNYFDRFISTNKCNIEVAGFVQLLSVACLSISAKFGEVSIPQM 55
           IK  SRL+L  +TVF+A NY DRFIS N+ +      V+LLSVACLS+++KF E   P  
Sbjct: 84  IKSRSRLNLSLETVFSAANYLDRFISMNQWHGWKYWMVELLSVACLSVASKFTESFTPSF 143

Query: 54  HEFQMDDQDDSVQASTIQ 1
            E QM+D + S ++STIQ
Sbjct: 144 DEIQMEDLEHSFESSTIQ 161


>ref|XP_003522122.1| PREDICTED: putative cyclin-D7-1-like [Glycine max]
          Length = 241

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 34/77 (44%), Positives = 51/77 (66%)
 Frame = -1

Query: 234 IKYASRLDLGSQTVFNAVNYFDRFISTNKCNIEVAGFVQLLSVACLSISAKFGEVSIPQM 55
           IK  SR ++   TVF AVNY DRF+S  +C+      ++L+S+ACLSI+ KF E+S   +
Sbjct: 76  IKCRSRFNISFGTVFLAVNYLDRFVSICQCHDWEYWMLELISIACLSIAIKFNEMSALSL 135

Query: 54  HEFQMDDQDDSVQASTI 4
           HE Q+++ D S Q++ I
Sbjct: 136 HEIQVENLDYSFQSNVI 152