BLASTX nr result
ID: Coptis23_contig00023937
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00023937
(1864 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002283802.2| PREDICTED: chaperone protein ClpD, chloropla... 848 0.0
ref|XP_002511055.1| ERD1 protein, chloroplast precursor, putativ... 847 0.0
ref|XP_002318194.1| predicted protein [Populus trichocarpa] gi|2... 836 0.0
ref|XP_002321773.1| predicted protein [Populus trichocarpa] gi|2... 836 0.0
ref|XP_003579667.1| PREDICTED: chaperone protein ClpD2, chloropl... 827 0.0
>ref|XP_002283802.2| PREDICTED: chaperone protein ClpD, chloroplastic-like [Vitis
vinifera] gi|147770910|emb|CAN67541.1| hypothetical
protein VITISV_012383 [Vitis vinifera]
gi|302142786|emb|CBI20081.3| unnamed protein product
[Vitis vinifera]
Length = 946
Score = 848 bits (2191), Expect = 0.0
Identities = 415/572 (72%), Positives = 504/572 (88%)
Frame = +3
Query: 3 RITTLISEILREGNIILFIDEVHTLIGSGTVGKGNKGSGLDIANLLKPSLGRGKLQCIGS 182
R+TTLIS+IL+ GNIILFIDEVH L+GSG G+GNKGSGLDIA+LLKPSLGRG+LQC S
Sbjct: 369 RVTTLISDILKSGNIILFIDEVHMLVGSGIAGRGNKGSGLDIASLLKPSLGRGQLQCFAS 428
Query: 183 TTTDEHRTHFEKDKALARRFQPVYINEPSEEDAVKILLGLREKYEAHHKCKYTLEAINAA 362
TT DE+ FEKDKALARRFQPV INEPS+E+AV+ILLGLREKYEAHHKC++TLEAINAA
Sbjct: 429 TTIDEYVKLFEKDKALARRFQPVLINEPSQEEAVRILLGLREKYEAHHKCRFTLEAINAA 488
Query: 363 AYLSARYIPDRYLPDKAIDLIDEAGSRAHIDAFKRKKEKQTNILSKSPKDYWQEITAVQA 542
+LSARYIPDR LPDKAIDLIDEAGS+A ++A+KRKKEKQT++L KSP DYWQEI AV+A
Sbjct: 489 VHLSARYIPDRRLPDKAIDLIDEAGSKARMEAYKRKKEKQTSVLLKSPDDYWQEIRAVKA 548
Query: 543 MHDVVLANKMKYGESSSGKIEDTKFLSEPSVSSASDDDKFTMVGPDDVAAVASLWSGIPI 722
MH++V+A+K+K +S + + L E + S SDD++ +VGP+++A VASLWSGIP+
Sbjct: 549 MHEMVMASKLKNCNGASCMEDGSTVLFESPLPSMSDDNEPIVVGPNEIAVVASLWSGIPV 608
Query: 723 QQLTVDERLRLVGLDEQLKQRIVGQDDAVVAISRAVKRSRVGLKDPNRPTAAILFCGPTG 902
QQ+T DER+ LVGL EQL++R+VGQD+A+ +ISRAVKRSRVGLKDPNRP AA+LFCGPTG
Sbjct: 609 QQITADERMLLVGLHEQLRKRVVGQDNAIASISRAVKRSRVGLKDPNRPIAAMLFCGPTG 668
Query: 903 VGKTELSKALAACYFGSEDAMLRLDMSEYMERHAVSKLIGSPPGYIGYGEGGTLTEAVRK 1082
VGKTEL+KALAACYFGSE AM+RLDMSEYME+H+VSKLIGSPPGY+GYGEGGTLTEA+R+
Sbjct: 669 VGKTELAKALAACYFGSEAAMVRLDMSEYMEQHSVSKLIGSPPGYVGYGEGGTLTEAIRR 728
Query: 1083 RPFTLLLLDEIEKAHPDIFNLLLQVFEDGHLTDSQGRTVSFKNTLIIMTSNIGSTAIAKG 1262
+PFT++LLDEIEKAHPDIFN+LLQ+FEDGHLTDSQGR V F+N L++MTSN+GS AIAKG
Sbjct: 729 QPFTVVLLDEIEKAHPDIFNILLQMFEDGHLTDSQGRRVLFRNALVVMTSNVGSAAIAKG 788
Query: 1263 SRSSIGFLLEGDDKQNTYAGMKSLVMEELKAYFRPELLNRMDDIVVFRPFEMTQMLEILN 1442
+SSIGF + DD+ +YAGMK+LVMEELKAYFRPELLNR+D+IVVF P E QMLEILN
Sbjct: 789 RQSSIGFSI-ADDEPTSYAGMKALVMEELKAYFRPELLNRLDEIVVFHPLEKAQMLEILN 847
Query: 1443 MMLKEVKGRVMSLGVGLEVSEAMMDLLCKRGYDRSYGARPLRRAVTLLVEDVLSEALLVG 1622
ML+EVK R+ SLG+G+EVS +++DLLC++GYD++YGARPLRRAVTL++ED LSEALL
Sbjct: 848 TMLQEVKERLSSLGIGMEVSVSVIDLLCQQGYDKNYGARPLRRAVTLIIEDPLSEALLTE 907
Query: 1623 DCKPGDVATIDVDADGNPFVTTQSDQRSHLSD 1718
+ +PGD+A +D+DA GNPFV QS++R HLSD
Sbjct: 908 EYQPGDIAVVDLDASGNPFVRKQSNRRIHLSD 939
>ref|XP_002511055.1| ERD1 protein, chloroplast precursor, putative [Ricinus communis]
gi|223550170|gb|EEF51657.1| ERD1 protein, chloroplast
precursor, putative [Ricinus communis]
Length = 946
Score = 847 bits (2188), Expect = 0.0
Identities = 415/577 (71%), Positives = 501/577 (86%)
Frame = +3
Query: 3 RITTLISEILREGNIILFIDEVHTLIGSGTVGKGNKGSGLDIANLLKPSLGRGKLQCIGS 182
R+T LI EIL+EGNIILFIDEVHT++G+GTVG+GNKGSGLDIANLLKP LGRG+LQCI S
Sbjct: 372 RVTALIKEILKEGNIILFIDEVHTIVGTGTVGRGNKGSGLDIANLLKPPLGRGELQCIAS 431
Query: 183 TTTDEHRTHFEKDKALARRFQPVYINEPSEEDAVKILLGLREKYEAHHKCKYTLEAINAA 362
TT DE+R HFE DKALARRFQPV I+EPS+EDAVKILLGLR+KYEAHH C++TLEAINAA
Sbjct: 432 TTIDEYRAHFEIDKALARRFQPVTIDEPSQEDAVKILLGLRQKYEAHHNCRFTLEAINAA 491
Query: 363 AYLSARYIPDRYLPDKAIDLIDEAGSRAHIDAFKRKKEKQTNILSKSPKDYWQEITAVQA 542
YLSARY+ DRYLPDKAIDLIDEAGSRA I++ K+KKE+QT ILSKSP DYWQEI VQA
Sbjct: 492 VYLSARYVADRYLPDKAIDLIDEAGSRARIESHKKKKEQQTCILSKSPDDYWQEIRTVQA 551
Query: 543 MHDVVLANKMKYGESSSGKIEDTKFLSEPSVSSASDDDKFTMVGPDDVAAVASLWSGIPI 722
MH+VVLA++M + + S+ +D+ + S DD+ T+VGPDD+AAVASLWSGIP+
Sbjct: 552 MHEVVLASRMTH-DGSASSTDDSGEIILKSTEHVMLDDEPTVVGPDDIAAVASLWSGIPV 610
Query: 723 QQLTVDERLRLVGLDEQLKQRIVGQDDAVVAISRAVKRSRVGLKDPNRPTAAILFCGPTG 902
QQLT DER+ LVGLD++L++R++GQD+AV AIS AVKRSRVGLKDP+RP AA++FCGPTG
Sbjct: 611 QQLTADERMFLVGLDDELRKRVIGQDEAVSAISCAVKRSRVGLKDPDRPIAAMMFCGPTG 670
Query: 903 VGKTELSKALAACYFGSEDAMLRLDMSEYMERHAVSKLIGSPPGYIGYGEGGTLTEAVRK 1082
VGKTEL+KALAACYFGSE AMLRLDMSEYMERH VSKLIG+PPGY+GYGEGGTLTEA+R+
Sbjct: 671 VGKTELAKALAACYFGSESAMLRLDMSEYMERHTVSKLIGAPPGYVGYGEGGTLTEAIRR 730
Query: 1083 RPFTLLLLDEIEKAHPDIFNLLLQVFEDGHLTDSQGRTVSFKNTLIIMTSNIGSTAIAKG 1262
RPFTL+LLDEIEKAHPD+FN+LLQ+FEDGHLTDSQGR VSFKN L++MTSN+GSTAIAKG
Sbjct: 731 RPFTLVLLDEIEKAHPDVFNILLQLFEDGHLTDSQGRKVSFKNALVVMTSNVGSTAIAKG 790
Query: 1263 SRSSIGFLLEGDDKQNTYAGMKSLVMEELKAYFRPELLNRMDDIVVFRPFEMTQMLEILN 1442
R+SIGF++ D++ +YAG+K+LVMEELK YFRPELLNR+D++VVF P E QML+IL+
Sbjct: 791 GRTSIGFMI-ADNESTSYAGIKALVMEELKTYFRPELLNRIDEVVVFHPLEKIQMLKILS 849
Query: 1443 MMLKEVKGRVMSLGVGLEVSEAMMDLLCKRGYDRSYGARPLRRAVTLLVEDVLSEALLVG 1622
+ML+EVK R++SLG+GLEVSE + +L+CK+GYD YGARPLRRAVT ++E+ +SEALL G
Sbjct: 850 LMLREVKERLISLGIGLEVSETIKELVCKQGYDPVYGARPLRRAVTEIIENPVSEALLAG 909
Query: 1623 DCKPGDVATIDVDADGNPFVTTQSDQRSHLSDVPNMM 1733
+ KPGD A +D+DA GNP V SD+ LSD ++
Sbjct: 910 EFKPGDTARVDLDASGNPVVINGSDESIQLSDTTRVL 946
>ref|XP_002318194.1| predicted protein [Populus trichocarpa] gi|222858867|gb|EEE96414.1|
predicted protein [Populus trichocarpa]
Length = 948
Score = 836 bits (2160), Expect = 0.0
Identities = 410/572 (71%), Positives = 498/572 (87%)
Frame = +3
Query: 3 RITTLISEILREGNIILFIDEVHTLIGSGTVGKGNKGSGLDIANLLKPSLGRGKLQCIGS 182
R+T+LI EI +EG++ILFIDEVHTL+G+GTVG+GNKGSGLDIAN+LKPSLGRG+LQCI S
Sbjct: 373 RVTSLIREIQKEGDVILFIDEVHTLVGTGTVGRGNKGSGLDIANILKPSLGRGELQCIAS 432
Query: 183 TTTDEHRTHFEKDKALARRFQPVYINEPSEEDAVKILLGLREKYEAHHKCKYTLEAINAA 362
TT DE+RTHFE DKALARRFQPV INEPS+EDA++ILLGLR++YEAHH C++T EAINAA
Sbjct: 433 TTLDEYRTHFEIDKALARRFQPVLINEPSQEDAIRILLGLRQRYEAHHNCRFTPEAINAA 492
Query: 363 AYLSARYIPDRYLPDKAIDLIDEAGSRAHIDAFKRKKEKQTNILSKSPKDYWQEITAVQA 542
+LSARYI DRYLPDKAIDLIDEAGSRA I+A++RKKE+QT ILSK+P DYWQEI VQA
Sbjct: 493 VHLSARYIADRYLPDKAIDLIDEAGSRARIEAYRRKKEQQTFILSKTPDDYWQEIRTVQA 552
Query: 543 MHDVVLANKMKYGESSSGKIEDTKFLSEPSVSSASDDDKFTMVGPDDVAAVASLWSGIPI 722
MH+VVLA+++ S S + E S+ AS+ D+ +VGPDD+AAVASLWSGIP+
Sbjct: 553 MHEVVLASRLANDCSLSSMDGSGEITIESSLPPASNADEPAVVGPDDIAAVASLWSGIPV 612
Query: 723 QQLTVDERLRLVGLDEQLKQRIVGQDDAVVAISRAVKRSRVGLKDPNRPTAAILFCGPTG 902
QQLT DER LVGL+E+L++R++GQD+AV AISRAVKRSRVGLKDP+RP AA+LFCGPTG
Sbjct: 613 QQLTADERKFLVGLEEELRKRVIGQDEAVAAISRAVKRSRVGLKDPDRPIAAMLFCGPTG 672
Query: 903 VGKTELSKALAACYFGSEDAMLRLDMSEYMERHAVSKLIGSPPGYIGYGEGGTLTEAVRK 1082
VGKTEL+KALA YFGSE AMLRLDMSEYMERH VSKLIG+PPGY+GYG+GG LTE++RK
Sbjct: 673 VGKTELTKALARNYFGSESAMLRLDMSEYMERHTVSKLIGAPPGYVGYGKGGILTESIRK 732
Query: 1083 RPFTLLLLDEIEKAHPDIFNLLLQVFEDGHLTDSQGRTVSFKNTLIIMTSNIGSTAIAKG 1262
+PFT++LLDEIEKAHPDIFN+LLQ+FEDGHLTDSQGR VSFKN L++MTSN+GS AIAKG
Sbjct: 733 QPFTVVLLDEIEKAHPDIFNILLQLFEDGHLTDSQGRRVSFKNALVVMTSNVGSAAIAKG 792
Query: 1263 SRSSIGFLLEGDDKQNTYAGMKSLVMEELKAYFRPELLNRMDDIVVFRPFEMTQMLEILN 1442
R+SIGF++E D++ ++YA M+SL+MEELK YFRPELLNR+D++VVF P E QML+ILN
Sbjct: 793 GRASIGFMIE-DNENSSYAAMQSLIMEELKGYFRPELLNRIDEVVVFHPLEKAQMLQILN 851
Query: 1443 MMLKEVKGRVMSLGVGLEVSEAMMDLLCKRGYDRSYGARPLRRAVTLLVEDVLSEALLVG 1622
+ML+EVK R++SLG+GLEVSE++ DL+C++GYD+ YGARPLRRAVT ++E+ LSEA L G
Sbjct: 852 LMLQEVKERLISLGIGLEVSESIKDLICQQGYDKFYGARPLRRAVTQVIENPLSEAFLAG 911
Query: 1623 DCKPGDVATIDVDADGNPFVTTQSDQRSHLSD 1718
KPGD A ID+DA GNP V+ SD+ HLSD
Sbjct: 912 QYKPGDTAFIDLDASGNPVVSKWSDRSMHLSD 943
>ref|XP_002321773.1| predicted protein [Populus trichocarpa] gi|222868769|gb|EEF05900.1|
predicted protein [Populus trichocarpa]
Length = 939
Score = 836 bits (2159), Expect = 0.0
Identities = 411/572 (71%), Positives = 495/572 (86%)
Frame = +3
Query: 3 RITTLISEILREGNIILFIDEVHTLIGSGTVGKGNKGSGLDIANLLKPSLGRGKLQCIGS 182
R+TTLI EIL+EGNIILFIDEVHTL+GSGTVGKGNKGSGLDIANLLKPSLGRG+ QCI S
Sbjct: 364 RVTTLIREILKEGNIILFIDEVHTLVGSGTVGKGNKGSGLDIANLLKPSLGRGEFQCIAS 423
Query: 183 TTTDEHRTHFEKDKALARRFQPVYINEPSEEDAVKILLGLREKYEAHHKCKYTLEAINAA 362
TT DE+RTHFE DKALARRFQPV INEPS+EDAV+ILLGL++KYEAHH C++TLEAINAA
Sbjct: 424 TTVDEYRTHFENDKALARRFQPVLINEPSQEDAVRILLGLQQKYEAHHNCRFTLEAINAA 483
Query: 363 AYLSARYIPDRYLPDKAIDLIDEAGSRAHIDAFKRKKEKQTNILSKSPKDYWQEITAVQA 542
LSARYI DRYLPDKAIDLIDEAGSRA I+A++RKKE+++ ILSKSP DYWQEI VQA
Sbjct: 484 VNLSARYIADRYLPDKAIDLIDEAGSRARIEAYRRKKEQKSFILSKSPDDYWQEIRTVQA 543
Query: 543 MHDVVLANKMKYGESSSGKIEDTKFLSEPSVSSASDDDKFTMVGPDDVAAVASLWSGIPI 722
MH++VLA+++ +S+S + E + A +DD+ +VG DD+AAVASLWSGIP+
Sbjct: 544 MHEMVLASRLTNDDSASSMDGTGEITLESRLPPALNDDEPPVVGRDDIAAVASLWSGIPV 603
Query: 723 QQLTVDERLRLVGLDEQLKQRIVGQDDAVVAISRAVKRSRVGLKDPNRPTAAILFCGPTG 902
QQLT +ER+ LV L+E+L++R++GQD+A+ AISRAVKRSRVGLKDP+RP AA+LFCGPTG
Sbjct: 604 QQLTAEERMFLVDLEEELRKRVIGQDEAIAAISRAVKRSRVGLKDPDRPIAAMLFCGPTG 663
Query: 903 VGKTELSKALAACYFGSEDAMLRLDMSEYMERHAVSKLIGSPPGYIGYGEGGTLTEAVRK 1082
VGKTEL+KALA YFGSE AMLRLDMSEYMERH VSKLIG+PPGY+GYGEGG LTEA+RK
Sbjct: 664 VGKTELTKALARSYFGSESAMLRLDMSEYMERHTVSKLIGAPPGYVGYGEGGILTEAIRK 723
Query: 1083 RPFTLLLLDEIEKAHPDIFNLLLQVFEDGHLTDSQGRTVSFKNTLIIMTSNIGSTAIAKG 1262
+PFT++LLDEIEKAHPDIFN+LLQ+FEDGHLTDSQGR VSFKN L++MTSN+GSTAIAKG
Sbjct: 724 QPFTVVLLDEIEKAHPDIFNILLQLFEDGHLTDSQGRRVSFKNALVVMTSNVGSTAIAKG 783
Query: 1263 SRSSIGFLLEGDDKQNTYAGMKSLVMEELKAYFRPELLNRMDDIVVFRPFEMTQMLEILN 1442
R SIGF++ DD+ ++YA +KSLVMEELK YFRPELLNR+D++VVF P E Q L+ILN
Sbjct: 784 GRVSIGFMI-ADDENSSYAAIKSLVMEELKGYFRPELLNRIDEVVVFHPLEKAQTLQILN 842
Query: 1443 MMLKEVKGRVMSLGVGLEVSEAMMDLLCKRGYDRSYGARPLRRAVTLLVEDVLSEALLVG 1622
+ML++VK R++SLG+GLEVSE++ D++C++GYD+ YGARPLRRAVT ++E+ LSEA L G
Sbjct: 843 IMLQDVKERLISLGIGLEVSESIKDIVCQQGYDQFYGARPLRRAVTQIIENPLSEAFLAG 902
Query: 1623 DCKPGDVATIDVDADGNPFVTTQSDQRSHLSD 1718
D KPGD A D+DA GNP V+ S R HLS+
Sbjct: 903 DFKPGDTAFFDLDASGNPVVSHWSAMRMHLSE 934
>ref|XP_003579667.1| PREDICTED: chaperone protein ClpD2, chloroplastic-like [Brachypodium
distachyon]
Length = 942
Score = 827 bits (2137), Expect = 0.0
Identities = 407/578 (70%), Positives = 492/578 (85%), Gaps = 6/578 (1%)
Frame = +3
Query: 3 RITTLISEILREGNIILFIDEVHTLIGSGTVGKGNKGSGLDIANLLKPSLGRGKLQCIGS 182
R+T+LI E+ + G++ILFIDEVHTLIGSG G+GNKGSGLDIANLLKP+L RG+LQCI S
Sbjct: 361 RVTSLIREVRKAGDVILFIDEVHTLIGSGVAGRGNKGSGLDIANLLKPALARGELQCIAS 420
Query: 183 TTTDEHRTHFEKDKALARRFQPVYINEPSEEDAVKILLGLREKYEAHHKCKYTLEAINAA 362
TT DEHR HFEKDKALARRFQPVY+NEPS+EDAVKILLGLREKYE +HKCKYTLE INAA
Sbjct: 421 TTLDEHRLHFEKDKALARRFQPVYVNEPSQEDAVKILLGLREKYETYHKCKYTLEGINAA 480
Query: 363 AYLSARYIPDRYLPDKAIDLIDEAGSRAHIDAFKRKKEKQTNILSKSPKDYWQEITAVQA 542
YLSARYIPDR+LPDKAIDLIDEAGSRA +++FK+KKE+Q +I+SKSP +YWQEI AVQA
Sbjct: 481 VYLSARYIPDRHLPDKAIDLIDEAGSRARMESFKKKKEEQCSIISKSPDEYWQEIRAVQA 540
Query: 543 MHDVVLANKMKYG--ESSSGKIEDTKFLSE----PSVSSASDDDKFTMVGPDDVAAVASL 704
MH+V L N++KY E+ D + LS+ P+ A+ D+ +MVG +++A V SL
Sbjct: 541 MHEVALTNRLKYSLNENDQENGVDVEVLSDGKIMPASKLAASADELSMVGSEEIARVTSL 600
Query: 705 WSGIPIQQLTVDERLRLVGLDEQLKQRIVGQDDAVVAISRAVKRSRVGLKDPNRPTAAIL 884
WSGIP+QQLT DER LVGLD++L++R++GQDDAVVAISRAVKRSRVG+ DPNRP A +L
Sbjct: 601 WSGIPVQQLTADERKLLVGLDDELRKRVIGQDDAVVAISRAVKRSRVGMSDPNRPIATLL 660
Query: 885 FCGPTGVGKTELSKALAACYFGSEDAMLRLDMSEYMERHAVSKLIGSPPGYIGYGEGGTL 1064
FCGPTGVGKTEL+KALAA YFGSE +M+RLDMSEYMERHAVSKLIGSPPGY+G+GEGGTL
Sbjct: 661 FCGPTGVGKTELTKALAAIYFGSESSMVRLDMSEYMERHAVSKLIGSPPGYMGFGEGGTL 720
Query: 1065 TEAVRKRPFTLLLLDEIEKAHPDIFNLLLQVFEDGHLTDSQGRTVSFKNTLIIMTSNIGS 1244
TEAVR++PFT++LLDEIEKAHPDIFN+LLQVFEDGHLTDSQGR VSFKNTLI+MTSN+GS
Sbjct: 721 TEAVRRKPFTVVLLDEIEKAHPDIFNILLQVFEDGHLTDSQGRRVSFKNTLIVMTSNVGS 780
Query: 1245 TAIAKGSRSSIGFLLEGDDKQNTYAGMKSLVMEELKAYFRPELLNRMDDIVVFRPFEMTQ 1424
+I+KG R SIGF + D ++NTY MKSLV EELKA+FRPELLNRMD++VVFRP E TQ
Sbjct: 781 ASISKG-RMSIGFQTQNDTEENTYNVMKSLVTEELKAFFRPELLNRMDEVVVFRPLEKTQ 839
Query: 1425 MLEILNMMLKEVKGRVMSLGVGLEVSEAMMDLLCKRGYDRSYGARPLRRAVTLLVEDVLS 1604
ML ILN++L+EVKGR+++LG+GL++S+AM +++ + GYD+SYGARPLRRAVT LVED +S
Sbjct: 840 MLAILNIILQEVKGRLLALGIGLQISDAMKNVISQEGYDKSYGARPLRRAVTQLVEDAIS 899
Query: 1605 EALLVGDCKPGDVATIDVDADGNPFVTTQSDQRSHLSD 1718
E +L G KPGD +D D G P ++ +DQ +SD
Sbjct: 900 EGILSGQYKPGDTIMMDADDKGKPCLSRLNDQTVQMSD 937