BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023911
         (664 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38165.3| unnamed protein product [Vitis vinifera]              334   8e-90
ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containi...   334   8e-90
ref|XP_002517667.1| pentatricopeptide repeat-containing protein,...   324   1e-86
ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containi...   322   3e-86
ref|XP_003602631.1| Pentatricopeptide repeat-containing protein ...   318   8e-85

>emb|CBI38165.3| unnamed protein product [Vitis vinifera]
          Length = 654

 Score =  334 bits (857), Expect = 8e-90
 Identities = 160/221 (72%), Positives = 191/221 (86%)
 Frame = +2

Query: 2   EEALDFFVRMHREDFLLNEYSYSSALSACAGLVDMKTGVQIHGSMSKSPYFSDVYMGSAL 181
           EE+L++FV+MHREDFLLNEYS+ SALSACAGL+D+  G Q+H  +SKS Y +DVYMGSAL
Sbjct: 129 EESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSAL 188

Query: 182 IDMYSKCGNVYDAQKVFNGMSVRNIVSWNSLITCYEQNGPTNEALRLFFEMMEFGFEPDE 361
           IDMYSKCG+V  A++VF+GM  RN+V+WNSLITCYEQNGP +EAL +F  MM+ G EPDE
Sbjct: 189 IDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDE 248

Query: 362 VTLASVVSACATLLAIKEGSQIHTRVIKFEKFKDDLVLGNALVDMYAKCGRIKEARRIFD 541
           VTLASVVSACA+L A+KEG QIH RV+K  KF+DDLVLGNALVDMYAKC ++ EARR+FD
Sbjct: 249 VTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFD 308

Query: 542 GMPIKNVVSETSMISGYAKATSVKAARLMFMKMTEKNVVSW 664
            M I+NVVSETSM+SGYA+A SVKAAR MF KMT++NVVSW
Sbjct: 309 RMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSW 349



 Score =  125 bits (314), Expect = 7e-27
 Identities = 81/244 (33%), Positives = 120/244 (49%), Gaps = 32/244 (13%)
 Frame = +2

Query: 5   EALDFFVRMHREDFLLNEYSYSSALSACAGLVDMKTGVQIHGSMSKSPYF-SDVYMGSAL 181
           EAL+ FVRM       +E + +S +SACA L  +K G+QIH  + K+  F  D+ +G+AL
Sbjct: 231 EALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNAL 290

Query: 182 IDMYSKCGNVYDAQKVFNGMSVRNIVS-------------------------------WN 268
           +DMY+KC  V +A++VF+ MS+RN+VS                               WN
Sbjct: 291 VDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWN 350

Query: 269 SLITCYEQNGPTNEALRLFFEMMEFGFEPDEVTLASVVSACATLLAIKEGSQIHTRVIKF 448
           +LI  Y QNG   EALRLF  +      P   T  +++                      
Sbjct: 351 ALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLL---------------------- 388

Query: 449 EKFKDDLVLGNALVDMYAKCGRIKEARRIFDGMPIKNVVSETSMISGYAKATSVKAARLM 628
              K D+ +GN+L+DMY KCG I++  R+F+ M  ++ VS  ++I GYA+      A  +
Sbjct: 389 ---KSDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQI 445

Query: 629 FMKM 640
           F KM
Sbjct: 446 FRKM 449



 Score =  110 bits (274), Expect = 3e-22
 Identities = 68/238 (28%), Positives = 120/238 (50%), Gaps = 31/238 (13%)
 Frame = +2

Query: 35  REDFLLNEYSYSSALSACAGLVDMKTGVQIHGSMSKSPYFSDVYMGSALIDMYSKCGNVY 214
           R+ +L N   ++  L +C      +    +H  +  + +  ++++ + LID+Y KC  + 
Sbjct: 8   RDLYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLD 67

Query: 215 DAQKVFNGMSVRNIVSWNSLITCYEQNGPTNEALRLFFEM----------MEFGFEP--- 355
           DA+K+F+ M  RN  +WNSLI+   ++G  +EA RLF  M          M  GF     
Sbjct: 68  DARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDR 127

Query: 356 ------------------DEVTLASVVSACATLLAIKEGSQIHTRVIKFEKFKDDLVLGN 481
                             +E +  S +SACA L+ +  G+Q+H  V K  ++  D+ +G+
Sbjct: 128 FEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSK-SRYSTDVYMGS 186

Query: 482 ALVDMYAKCGRIKEARRIFDGMPIKNVVSETSMISGYAKATSVKAARLMFMKMTEKNV 655
           AL+DMY+KCG +  A  +F GM  +N+V+  S+I+ Y +      A  +F++M +  +
Sbjct: 187 ALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGL 244



 Score = 97.1 bits (240), Expect = 3e-18
 Identities = 58/186 (31%), Positives = 93/186 (50%), Gaps = 2/186 (1%)
 Frame = +2

Query: 2   EEALDFFVRMHREDFLLNEYSYSSALSACAGLVDMKTGVQIHGSMSKSPYFSDVYMGSAL 181
           EEAL  F  + RE      Y++ + L                         SD+++G++L
Sbjct: 363 EEALRLFRLLKRESIWPTHYTFGNLLK------------------------SDIFVGNSL 398

Query: 182 IDMYSKCGNVYDAQKVFNGMSVRNIVSWNSLITCYEQNGPTNEALRLFFEMMEFGFEPDE 361
           IDMY KCG++ D  +VF  M  R+ VSWN++I  Y QNG   EAL++F +M+  G +PD 
Sbjct: 399 IDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDH 458

Query: 362 VTLASVVSACATLLAIKEGSQIHTRVIK--FEKFKDDLVLGNALVDMYAKCGRIKEARRI 535
           VT+  V+ AC+    ++EG      + +      KD       +VD+  + G + EA+ +
Sbjct: 459 VTMIGVLCACSHAGLVEEGRHYFFSMEEHGLIPLKDHY---TCMVDLLGRAGCLNEAKNL 515

Query: 536 FDGMPI 553
            + MP+
Sbjct: 516 IEAMPV 521


>ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
           [Vitis vinifera]
          Length = 684

 Score =  334 bits (857), Expect = 8e-90
 Identities = 160/221 (72%), Positives = 191/221 (86%)
 Frame = +2

Query: 2   EEALDFFVRMHREDFLLNEYSYSSALSACAGLVDMKTGVQIHGSMSKSPYFSDVYMGSAL 181
           EE+L++FV+MHREDFLLNEYS+ SALSACAGL+D+  G Q+H  +SKS Y +DVYMGSAL
Sbjct: 129 EESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSAL 188

Query: 182 IDMYSKCGNVYDAQKVFNGMSVRNIVSWNSLITCYEQNGPTNEALRLFFEMMEFGFEPDE 361
           IDMYSKCG+V  A++VF+GM  RN+V+WNSLITCYEQNGP +EAL +F  MM+ G EPDE
Sbjct: 189 IDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDE 248

Query: 362 VTLASVVSACATLLAIKEGSQIHTRVIKFEKFKDDLVLGNALVDMYAKCGRIKEARRIFD 541
           VTLASVVSACA+L A+KEG QIH RV+K  KF+DDLVLGNALVDMYAKC ++ EARR+FD
Sbjct: 249 VTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFD 308

Query: 542 GMPIKNVVSETSMISGYAKATSVKAARLMFMKMTEKNVVSW 664
            M I+NVVSETSM+SGYA+A SVKAAR MF KMT++NVVSW
Sbjct: 309 RMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSW 349



 Score =  150 bits (378), Expect = 3e-34
 Identities = 93/249 (37%), Positives = 135/249 (54%), Gaps = 37/249 (14%)
 Frame = +2

Query: 5   EALDFFVRMHREDFLLNEYSYSSALSACAGLVDMKTGVQIHGSMSKSPYF-SDVYMGSAL 181
           EAL+ FVRM       +E + +S +SACA L  +K G+QIH  + K+  F  D+ +G+AL
Sbjct: 231 EALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNAL 290

Query: 182 IDMYSKCGNVYDAQKVFNGMSVRNIVS-------------------------------WN 268
           +DMY+KC  V +A++VF+ MS+RN+VS                               WN
Sbjct: 291 VDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWN 350

Query: 269 SLITCYEQNGPTNEALRLFFEMMEFGFEPDEVTLASVVSACATLLAIKEGSQIHTRVIK- 445
           +LI  Y QNG   EALRLF  +      P   T  +++SACA L  +  G Q HT V+K 
Sbjct: 351 ALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQ 410

Query: 446 -FE---KFKDDLVLGNALVDMYAKCGRIKEARRIFDGMPIKNVVSETSMISGYAKATSVK 613
            FE     + D+ +GN+L+DMY KCG I++  R+F+ M  ++ VS  ++I GYA+     
Sbjct: 411 GFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGA 470

Query: 614 AARLMFMKM 640
            A  +F KM
Sbjct: 471 EALQIFRKM 479



 Score =  120 bits (302), Expect = 2e-25
 Identities = 68/192 (35%), Positives = 106/192 (55%), Gaps = 8/192 (4%)
 Frame = +2

Query: 2   EEALDFFVRMHREDFLLNEYSYSSALSACAGLVDMKTGVQIHGSMSKSPYF------SDV 163
           EEAL  F  + RE      Y++ + LSACA L D+  G Q H  + K  +       SD+
Sbjct: 363 EEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDI 422

Query: 164 YMGSALIDMYSKCGNVYDAQKVFNGMSVRNIVSWNSLITCYEQNGPTNEALRLFFEMMEF 343
           ++G++LIDMY KCG++ D  +VF  M  R+ VSWN++I  Y QNG   EAL++F +M+  
Sbjct: 423 FVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVC 482

Query: 344 GFEPDEVTLASVVSACATLLAIKEGSQIHTRVIK--FEKFKDDLVLGNALVDMYAKCGRI 517
           G +PD VT+  V+ AC+    ++EG      + +      KD       +VD+  + G +
Sbjct: 483 GEKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEEHGLIPLKDHY---TCMVDLLGRAGCL 539

Query: 518 KEARRIFDGMPI 553
            EA+ + + MP+
Sbjct: 540 NEAKNLIEAMPV 551



 Score =  110 bits (274), Expect = 3e-22
 Identities = 68/238 (28%), Positives = 120/238 (50%), Gaps = 31/238 (13%)
 Frame = +2

Query: 35  REDFLLNEYSYSSALSACAGLVDMKTGVQIHGSMSKSPYFSDVYMGSALIDMYSKCGNVY 214
           R+ +L N   ++  L +C      +    +H  +  + +  ++++ + LID+Y KC  + 
Sbjct: 8   RDLYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLD 67

Query: 215 DAQKVFNGMSVRNIVSWNSLITCYEQNGPTNEALRLFFEM----------MEFGFEP--- 355
           DA+K+F+ M  RN  +WNSLI+   ++G  +EA RLF  M          M  GF     
Sbjct: 68  DARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDR 127

Query: 356 ------------------DEVTLASVVSACATLLAIKEGSQIHTRVIKFEKFKDDLVLGN 481
                             +E +  S +SACA L+ +  G+Q+H  V K  ++  D+ +G+
Sbjct: 128 FEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSK-SRYSTDVYMGS 186

Query: 482 ALVDMYAKCGRIKEARRIFDGMPIKNVVSETSMISGYAKATSVKAARLMFMKMTEKNV 655
           AL+DMY+KCG +  A  +F GM  +N+V+  S+I+ Y +      A  +F++M +  +
Sbjct: 187 ALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGL 244


>ref|XP_002517667.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543299|gb|EEF44831.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 628

 Score =  324 bits (830), Expect = 1e-86
 Identities = 158/221 (71%), Positives = 185/221 (83%)
 Frame = +2

Query: 2   EEALDFFVRMHREDFLLNEYSYSSALSACAGLVDMKTGVQIHGSMSKSPYFSDVYMGSAL 181
           EEAL++FV+MHR+ F+LNEY++ S LSACAGL D+K G QIHG M KS +  DVYMGSAL
Sbjct: 133 EEALNYFVKMHRKGFVLNEYTFGSGLSACAGLKDLKIGTQIHGLMLKSQFLLDVYMGSAL 192

Query: 182 IDMYSKCGNVYDAQKVFNGMSVRNIVSWNSLITCYEQNGPTNEALRLFFEMMEFGFEPDE 361
           ID+YSKCG V  AQ+VF+GM  RN+VSWNSLITCYEQNGP+ EAL +F  MME GFEPDE
Sbjct: 193 IDIYSKCGFVDCAQRVFDGMMERNVVSWNSLITCYEQNGPSREALEIFMRMMESGFEPDE 252

Query: 362 VTLASVVSACATLLAIKEGSQIHTRVIKFEKFKDDLVLGNALVDMYAKCGRIKEARRIFD 541
           VTLASVVSACA+L A K+G +IH  V+K +K +DDL+L NALVDMYAKCGRI EAR +FD
Sbjct: 253 VTLASVVSACASLAAAKQGLEIHACVVKRDKLRDDLILSNALVDMYAKCGRINEARCVFD 312

Query: 542 GMPIKNVVSETSMISGYAKATSVKAARLMFMKMTEKNVVSW 664
            MPI+NVVSETSM+SGYAK  SVKAARL+F KM E+NVVSW
Sbjct: 313 RMPIRNVVSETSMVSGYAKTASVKAARLLFTKMIERNVVSW 353



 Score =  143 bits (361), Expect = 3e-32
 Identities = 89/249 (35%), Positives = 131/249 (52%), Gaps = 37/249 (14%)
 Frame = +2

Query: 5   EALDFFVRMHREDFLLNEYSYSSALSACAGLVDMKTGVQIHGSMSKSPYF-SDVYMGSAL 181
           EAL+ F+RM    F  +E + +S +SACA L   K G++IH  + K      D+ + +AL
Sbjct: 235 EALEIFMRMMESGFEPDEVTLASVVSACASLAAAKQGLEIHACVVKRDKLRDDLILSNAL 294

Query: 182 IDMYSKCGNVYDAQKVFNGMSVRNIVS-------------------------------WN 268
           +DMY+KCG + +A+ VF+ M +RN+VS                               WN
Sbjct: 295 VDMYAKCGRINEARCVFDRMPIRNVVSETSMVSGYAKTASVKAARLLFTKMIERNVVSWN 354

Query: 269 SLITCYEQNGPTNEALRLFFEMMEFGFEPDEVTLASVVSACATLLAIKEGSQIHTRVIKF 448
           +LI  Y QNG   EALRLF  +      P   T  ++++ACA L  ++ G Q H  V+K 
Sbjct: 355 ALIAGYTQNGENEEALRLFRMLKREAICPTHYTFGNLLNACANLADLQLGRQAHAHVLKH 414

Query: 449 E-KF----KDDLVLGNALVDMYAKCGRIKEARRIFDGMPIKNVVSETSMISGYAKATSVK 613
             +F    + D+ +GNAL+DMY KCG ++E  RIF+ M  ++ VS  +MI GYA+     
Sbjct: 415 GFRFQYGEESDVFVGNALIDMYMKCGSVEEGCRIFENMVERDYVSWNAMIVGYAQNGYGM 474

Query: 614 AARLMFMKM 640
            A  +F KM
Sbjct: 475 EALGLFRKM 483



 Score =  122 bits (305), Expect = 8e-26
 Identities = 76/230 (33%), Positives = 121/230 (52%), Gaps = 31/230 (13%)
 Frame = +2

Query: 50  LNEYSYSSALSACAGLVDMKTGVQIHGSMSKSPYFSDVYMGSALIDMYSKCGNVYDAQKV 229
           L+   ++  L +C     ++   +IH  + K+ +  +V++ + LID Y KCG   DA+K+
Sbjct: 17  LDSSPFAKLLDSCLKSKSLRDTRRIHARIIKTQFAYEVFIQNRLIDAYGKCGCFDDARKI 76

Query: 230 FNGMSVRNI-------------------------------VSWNSLITCYEQNGPTNEAL 316
           F+ M  +N+                                SWNSLI  + Q+    EAL
Sbjct: 77  FDQMPEKNVFSWNAIVSTLVKSGFLDEGARLFVSMPEPDQCSWNSLIAGFAQHDRFEEAL 136

Query: 317 RLFFEMMEFGFEPDEVTLASVVSACATLLAIKEGSQIHTRVIKFEKFKDDLVLGNALVDM 496
             F +M   GF  +E T  S +SACA L  +K G+QIH  ++K  +F  D+ +G+AL+D+
Sbjct: 137 NYFVKMHRKGFVLNEYTFGSGLSACAGLKDLKIGTQIHGLMLK-SQFLLDVYMGSALIDI 195

Query: 497 YAKCGRIKEARRIFDGMPIKNVVSETSMISGYAKATSVKAARLMFMKMTE 646
           Y+KCG +  A+R+FDGM  +NVVS  S+I+ Y +    + A  +FM+M E
Sbjct: 196 YSKCGFVDCAQRVFDGMMERNVVSWNSLITCYEQNGPSREALEIFMRMME 245



 Score =  110 bits (275), Expect = 2e-22
 Identities = 59/145 (40%), Positives = 86/145 (59%), Gaps = 6/145 (4%)
 Frame = +2

Query: 2   EEALDFFVRMHREDFLLNEYSYSSALSACAGLVDMKTGVQIHGSMSKSPYF------SDV 163
           EEAL  F  + RE      Y++ + L+ACA L D++ G Q H  + K  +       SDV
Sbjct: 367 EEALRLFRMLKREAICPTHYTFGNLLNACANLADLQLGRQAHAHVLKHGFRFQYGEESDV 426

Query: 164 YMGSALIDMYSKCGNVYDAQKVFNGMSVRNIVSWNSLITCYEQNGPTNEALRLFFEMMEF 343
           ++G+ALIDMY KCG+V +  ++F  M  R+ VSWN++I  Y QNG   EAL LF +M+  
Sbjct: 427 FVGNALIDMYMKCGSVEEGCRIFENMVERDYVSWNAMIVGYAQNGYGMEALGLFRKMLAS 486

Query: 344 GFEPDEVTLASVVSACATLLAIKEG 418
           G +PD VT+   + AC+    ++EG
Sbjct: 487 GEKPDHVTMIGALCACSHAGLVQEG 511


>ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Glycine max]
          Length = 705

 Score =  322 bits (826), Expect = 3e-86
 Identities = 158/221 (71%), Positives = 184/221 (83%)
 Frame = +2

Query: 2   EEALDFFVRMHREDFLLNEYSYSSALSACAGLVDMKTGVQIHGSMSKSPYFSDVYMGSAL 181
           EEAL FFV MH EDF+LNEYS+ SALSACAGL D+  G+QIH  +SKS Y  DVYMGSAL
Sbjct: 133 EEALRFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSAL 192

Query: 182 IDMYSKCGNVYDAQKVFNGMSVRNIVSWNSLITCYEQNGPTNEALRLFFEMMEFGFEPDE 361
           +DMYSKCG V  AQ+ F+GM+VRNIVSWNSLITCYEQNGP  +AL +F  MM+ G EPDE
Sbjct: 193 VDMYSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDE 252

Query: 362 VTLASVVSACATLLAIKEGSQIHTRVIKFEKFKDDLVLGNALVDMYAKCGRIKEARRIFD 541
           +TLASVVSACA+  AI+EG QIH RV+K +K+++DLVLGNALVDMYAKC R+ EAR +FD
Sbjct: 253 ITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFD 312

Query: 542 GMPIKNVVSETSMISGYAKATSVKAARLMFMKMTEKNVVSW 664
            MP++NVVSETSM+ GYA+A SVKAARLMF  M EKNVVSW
Sbjct: 313 RMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSW 353



 Score =  137 bits (344), Expect = 2e-30
 Identities = 85/249 (34%), Positives = 134/249 (53%), Gaps = 37/249 (14%)
 Frame = +2

Query: 5   EALDFFVRMHREDFLLNEYSYSSALSACAGLVDMKTGVQIHGSMSK-SPYFSDVYMGSAL 181
           +AL+ FV M       +E + +S +SACA    ++ G+QIH  + K   Y +D+ +G+AL
Sbjct: 235 KALEVFVMMMDNGVEPDEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNAL 294

Query: 182 IDMYSKCGNVYDAQKVFNGMSVRNIVS-------------------------------WN 268
           +DMY+KC  V +A+ VF+ M +RN+VS                               WN
Sbjct: 295 VDMYAKCRRVNEARLVFDRMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWN 354

Query: 269 SLITCYEQNGPTNEALRLFFEMMEFGFEPDEVTLASVVSACATLLAIKEGSQIHTRVIK- 445
           +LI  Y QNG   EA+RLF  +      P   T  ++++ACA L  +K G Q HT+++K 
Sbjct: 355 ALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKH 414

Query: 446 ---FEKFKD-DLVLGNALVDMYAKCGRIKEARRIFDGMPIKNVVSETSMISGYAKATSVK 613
              F+  ++ D+ +GN+L+DMY KCG +++   +F+ M  ++VVS  +MI GYA+     
Sbjct: 415 GFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGT 474

Query: 614 AARLMFMKM 640
            A  +F KM
Sbjct: 475 NALEIFRKM 483



 Score =  121 bits (304), Expect = 1e-25
 Identities = 72/202 (35%), Positives = 111/202 (54%), Gaps = 14/202 (6%)
 Frame = +2

Query: 2   EEALDFFVRMHREDFLLNEYSYSSALSACAGLVDMKTGVQIHGSMSKSPYF------SDV 163
           EEA+  F+ + RE      Y++ + L+ACA L D+K G Q H  + K  ++      SD+
Sbjct: 367 EEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDI 426

Query: 164 YMGSALIDMYSKCGNVYDAQKVFNGMSVRNIVSWNSLITCYEQNGPTNEALRLFFEMMEF 343
           ++G++LIDMY KCG V D   VF  M  R++VSWN++I  Y QNG    AL +F +M+  
Sbjct: 427 FVGNSLIDMYMKCGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVS 486

Query: 344 GFEPDEVTLASVVSACATLLAIKEGSQIHTRVIKFEKFKDDLVLG------NALVDMYAK 505
           G +PD VT+  V+SAC+    ++EG +       F   + +L L         +VD+  +
Sbjct: 487 GQKPDHVTMIGVLSACSHAGLVEEGRRY------FHSMRTELGLAPMKDHFTCMVDLLGR 540

Query: 506 CGRIKEARRIFDGMPIK--NVV 565
            G + EA  +   MP++  NVV
Sbjct: 541 AGCLDEANDLIQTMPMQPDNVV 562



 Score =  117 bits (294), Expect = 2e-24
 Identities = 76/247 (30%), Positives = 125/247 (50%), Gaps = 34/247 (13%)
 Frame = +2

Query: 17  FFVRMHREDFLLNEYSYSSALSACAGLVDMKTGV---QIHGSMSKSPYFSDVYMGSALID 187
           F  ++  E   L+   ++  L +C   V  K+G+   +IH  + K+ + S++++ + L+D
Sbjct: 6   FVQKLVGELCFLDSSPFAKLLDSC---VRSKSGIDARRIHARIIKTQFSSEIFIQNRLVD 62

Query: 188 MYSKCGNVYDAQKVFNGMSVRNI-------------------------------VSWNSL 274
            Y KCG   DA+KVF+ M  RN                                 SWN++
Sbjct: 63  AYGKCGYFEDARKVFDRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAM 122

Query: 275 ITCYEQNGPTNEALRLFFEMMEFGFEPDEVTLASVVSACATLLAIKEGSQIHTRVIKFEK 454
           ++ + Q+    EALR F +M    F  +E +  S +SACA L  +  G QIH  + K  +
Sbjct: 123 VSGFAQHDRFEEALRFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISK-SR 181

Query: 455 FKDDLVLGNALVDMYAKCGRIKEARRIFDGMPIKNVVSETSMISGYAKATSVKAARLMFM 634
           +  D+ +G+ALVDMY+KCG +  A+R FDGM ++N+VS  S+I+ Y +      A  +F+
Sbjct: 182 YLLDVYMGSALVDMYSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFV 241

Query: 635 KMTEKNV 655
            M +  V
Sbjct: 242 MMMDNGV 248


>ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355491679|gb|AES72882.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 705

 Score =  318 bits (814), Expect = 8e-85
 Identities = 156/221 (70%), Positives = 183/221 (82%)
 Frame = +2

Query: 2   EEALDFFVRMHREDFLLNEYSYSSALSACAGLVDMKTGVQIHGSMSKSPYFSDVYMGSAL 181
           EEAL F V MH EDF+LNEYS+ SALSACAGL+D+  GVQIHG ++KS Y  DVYMGSAL
Sbjct: 133 EEALRFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSAL 192

Query: 182 IDMYSKCGNVYDAQKVFNGMSVRNIVSWNSLITCYEQNGPTNEALRLFFEMMEFGFEPDE 361
           +DMYSKC  V  AQ+ F+ M VRNIVSWNSLITCYEQNGP  +AL +F  MM  G EPDE
Sbjct: 193 VDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDE 252

Query: 362 VTLASVVSACATLLAIKEGSQIHTRVIKFEKFKDDLVLGNALVDMYAKCGRIKEARRIFD 541
           +TLASV SACA+L AI+EG QIH RV+K +K+++DLVLGNALVDMYAKC R+ EAR +FD
Sbjct: 253 ITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFD 312

Query: 542 GMPIKNVVSETSMISGYAKATSVKAARLMFMKMTEKNVVSW 664
            MP+++VVSETSM+SGYAKA+SVKAARLMF  M E+NVVSW
Sbjct: 313 RMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSW 353



 Score =  140 bits (352), Expect = 3e-31
 Identities = 84/235 (35%), Positives = 129/235 (54%), Gaps = 37/235 (15%)
 Frame = +2

Query: 5   EALDFFVRMHREDFLLNEYSYSSALSACAGLVDMKTGVQIHGSMSK-SPYFSDVYMGSAL 181
           +AL+ FVRM       +E + +S  SACA L  ++ G+QIH  + K   Y +D+ +G+AL
Sbjct: 235 KALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNAL 294

Query: 182 IDMYSKCGNVYDAQKVFNGMSVR-------------------------------NIVSWN 268
           +DMY+KC  V +A+ VF+ M +R                               N+VSWN
Sbjct: 295 VDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWN 354

Query: 269 SLITCYEQNGPTNEALRLFFEMMEFGFEPDEVTLASVVSACATLLAIKEGSQIHTRVIK- 445
           +LI  Y QNG   EA+RLF  +      P   T  ++++ACA L  +K G Q HT ++K 
Sbjct: 355 ALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKH 414

Query: 446 ---FEKFKD-DLVLGNALVDMYAKCGRIKEARRIFDGMPIKNVVSETSMISGYAK 598
              F+  +D D+ +GN+L+DMY KCG +++ R +F+ M  ++ VS  +MI GYA+
Sbjct: 415 GFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQ 469



 Score =  121 bits (303), Expect = 1e-25
 Identities = 74/194 (38%), Positives = 105/194 (54%), Gaps = 9/194 (4%)
 Frame = +2

Query: 2   EEALDFFVRMHREDFLLNEYSYSSALSACAGLVDMKTGVQIH------GSMSKSPYFSDV 163
           EEA+  F+ + RE      Y++ + L+ACA L D+K G Q H      G   KS   SD+
Sbjct: 367 EEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDI 426

Query: 164 YMGSALIDMYSKCGNVYDAQKVFNGMSVRNIVSWNSLITCYEQNGPTNEALRLFFEMMEF 343
           ++G++LIDMY KCG V D + VF  M  R+ VSWN++I  Y QNG   EAL +F EM+  
Sbjct: 427 FVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVS 486

Query: 344 GFEPDEVTLASVVSACATLLAIKEGS---QIHTRVIKFEKFKDDLVLGNALVDMYAKCGR 514
           G  PD VT+  V+SAC+    ++EG    Q  T        KD       +VD+  + G 
Sbjct: 487 GERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKDHY---TCMVDLLGRAGC 543

Query: 515 IKEARRIFDGMPIK 556
           + EA  +   MP++
Sbjct: 544 LDEANNLIQTMPME 557



 Score =  111 bits (277), Expect = 1e-22
 Identities = 67/228 (29%), Positives = 114/228 (50%), Gaps = 31/228 (13%)
 Frame = +2

Query: 50  LNEYSYSSALSACAGLVDMKTGVQIHGSMSKSPYFSDVYMGSALIDMYSKCGNVYDAQKV 229
           L+   ++  L  C     +     +H  + K+ + S++++ + L+D+Y KCG + DA+KV
Sbjct: 17  LDSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKV 76

Query: 230 FNGMSVRNIVSWNSLITCYEQNGPTNEALRLF---------------------------- 325
           F+ M  RN  SWN+++    + G  +EAL LF                            
Sbjct: 77  FDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEAL 136

Query: 326 ---FEMMEFGFEPDEVTLASVVSACATLLAIKEGSQIHTRVIKFEKFKDDLVLGNALVDM 496
               +M    F  +E +  S +SACA L+ +  G QIH  + K  ++  D+ +G+ALVDM
Sbjct: 137 RFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAK-SRYSLDVYMGSALVDM 195

Query: 497 YAKCGRIKEARRIFDGMPIKNVVSETSMISGYAKATSVKAARLMFMKM 640
           Y+KC  +  A+R FD M ++N+VS  S+I+ Y +      A  +F++M
Sbjct: 196 YSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRM 243