BLASTX nr result

ID: Coptis23_contig00023905 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023905
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003562268.1| PREDICTED: exocyst complex component SEC3A-l...   204   5e-51
ref|XP_002464214.1| hypothetical protein SORBIDRAFT_01g014290 [S...   204   5e-51
gb|ABF97707.1| roothairless 1, putative, expressed [Oryza sativa...   204   5e-51
gb|ABF97708.1| roothairless 1, putative, expressed [Oryza sativa...   204   5e-51
gb|AAQ81632.1| roothairless 1 [Zea mays] gi|414871851|tpg|DAA504...   204   5e-51

>ref|XP_003562268.1| PREDICTED: exocyst complex component SEC3A-like [Brachypodium
           distachyon]
          Length = 891

 Score =  204 bits (520), Expect = 5e-51
 Identities = 98/113 (86%), Positives = 108/113 (95%)
 Frame = +2

Query: 41  VKEKQAELKIIRSTFVRRASEFLRNFFAGLVDFMISDKSYFSQRGQLKRPDHADFRYKCR 220
           V+EK+AEL+ +++TFVRRASEFLRN+F+ LVDFMISDKSYFSQRGQLKRPDHAD RYKCR
Sbjct: 377 VREKRAELEKLKTTFVRRASEFLRNYFSSLVDFMISDKSYFSQRGQLKRPDHADLRYKCR 436

Query: 221 TYARLLQHLKILDKSCLDPLRKAYCHSLNLLIRREAREFANELRASTKAPRNP 379
           TYARLLQHLK LDKSCL PLRKAYCHSLNLL+RREAREFANELRASTKAP+NP
Sbjct: 437 TYARLLQHLKSLDKSCLGPLRKAYCHSLNLLLRREAREFANELRASTKAPKNP 489


>ref|XP_002464214.1| hypothetical protein SORBIDRAFT_01g014290 [Sorghum bicolor]
           gi|241918068|gb|EER91212.1| hypothetical protein
           SORBIDRAFT_01g014290 [Sorghum bicolor]
          Length = 889

 Score =  204 bits (520), Expect = 5e-51
 Identities = 98/113 (86%), Positives = 108/113 (95%)
 Frame = +2

Query: 41  VKEKQAELKIIRSTFVRRASEFLRNFFAGLVDFMISDKSYFSQRGQLKRPDHADFRYKCR 220
           V+EK+AEL+ +++TFVRRASEFLRN+F+ LVDFMISDKSYFSQRGQLKRPDHAD RYKCR
Sbjct: 375 VREKKAELEKLKTTFVRRASEFLRNYFSSLVDFMISDKSYFSQRGQLKRPDHADLRYKCR 434

Query: 221 TYARLLQHLKILDKSCLDPLRKAYCHSLNLLIRREAREFANELRASTKAPRNP 379
           TYARLLQHLK LDKSCL PLRKAYCHSLNLL+RREAREFANELRASTKAP+NP
Sbjct: 435 TYARLLQHLKSLDKSCLGPLRKAYCHSLNLLLRREAREFANELRASTKAPKNP 487


>gb|ABF97707.1| roothairless 1, putative, expressed [Oryza sativa Japonica Group]
          Length = 888

 Score =  204 bits (520), Expect = 5e-51
 Identities = 98/113 (86%), Positives = 108/113 (95%)
 Frame = +2

Query: 41  VKEKQAELKIIRSTFVRRASEFLRNFFAGLVDFMISDKSYFSQRGQLKRPDHADFRYKCR 220
           V+EK+AEL+ +++TFVRRASEFLRN+F+ LVDFMISDKSYFSQRGQLKRPDHAD RYKCR
Sbjct: 375 VREKRAELEKLKTTFVRRASEFLRNYFSSLVDFMISDKSYFSQRGQLKRPDHADLRYKCR 434

Query: 221 TYARLLQHLKILDKSCLDPLRKAYCHSLNLLIRREAREFANELRASTKAPRNP 379
           TYARLLQHLK LDKSCL PLRKAYCHSLNLL+RREAREFANELRASTKAP+NP
Sbjct: 435 TYARLLQHLKSLDKSCLGPLRKAYCHSLNLLLRREAREFANELRASTKAPKNP 487


>gb|ABF97708.1| roothairless 1, putative, expressed [Oryza sativa Japonica Group]
          Length = 854

 Score =  204 bits (520), Expect = 5e-51
 Identities = 98/113 (86%), Positives = 108/113 (95%)
 Frame = +2

Query: 41  VKEKQAELKIIRSTFVRRASEFLRNFFAGLVDFMISDKSYFSQRGQLKRPDHADFRYKCR 220
           V+EK+AEL+ +++TFVRRASEFLRN+F+ LVDFMISDKSYFSQRGQLKRPDHAD RYKCR
Sbjct: 375 VREKRAELEKLKTTFVRRASEFLRNYFSSLVDFMISDKSYFSQRGQLKRPDHADLRYKCR 434

Query: 221 TYARLLQHLKILDKSCLDPLRKAYCHSLNLLIRREAREFANELRASTKAPRNP 379
           TYARLLQHLK LDKSCL PLRKAYCHSLNLL+RREAREFANELRASTKAP+NP
Sbjct: 435 TYARLLQHLKSLDKSCLGPLRKAYCHSLNLLLRREAREFANELRASTKAPKNP 487


>gb|AAQ81632.1| roothairless 1 [Zea mays] gi|414871851|tpg|DAA50408.1| TPA:
           roothair defective1 [Zea mays]
          Length = 889

 Score =  204 bits (520), Expect = 5e-51
 Identities = 98/113 (86%), Positives = 108/113 (95%)
 Frame = +2

Query: 41  VKEKQAELKIIRSTFVRRASEFLRNFFAGLVDFMISDKSYFSQRGQLKRPDHADFRYKCR 220
           V+EK+AEL+ +++TFVRRASEFLRN+F+ LVDFMISDKSYFSQRGQLKRPDHAD RYKCR
Sbjct: 375 VREKKAELEKLKTTFVRRASEFLRNYFSSLVDFMISDKSYFSQRGQLKRPDHADLRYKCR 434

Query: 221 TYARLLQHLKILDKSCLDPLRKAYCHSLNLLIRREAREFANELRASTKAPRNP 379
           TYARLLQHLK LDKSCL PLRKAYCHSLNLL+RREAREFANELRASTKAP+NP
Sbjct: 435 TYARLLQHLKSLDKSCLGPLRKAYCHSLNLLLRREAREFANELRASTKAPKNP 487


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