BLASTX nr result

ID: Coptis23_contig00023893 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023893
         (1060 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275929.2| PREDICTED: uncharacterized deoxyribonuclease...   397   e-108
ref|XP_002871773.1| hypothetical protein ARALYDRAFT_326186 [Arab...   374   e-101
ref|NP_568352.1| TatD related DNase [Arabidopsis thaliana] gi|12...   371   e-100
dbj|BAJ88020.1| predicted protein [Hordeum vulgare subsp. vulgare]    365   1e-98
ref|NP_001053632.1| Os04g0577500 [Oryza sativa Japonica Group] g...   360   3e-97

>ref|XP_002275929.2| PREDICTED: uncharacterized deoxyribonuclease YabD-like [Vitis
           vinifera]
          Length = 314

 Score =  397 bits (1019), Expect = e-108
 Identities = 201/306 (65%), Positives = 232/306 (75%), Gaps = 33/306 (10%)
 Frame = -1

Query: 991 KLFDSHCHLQDPRIYNVAPQLIQTALTSNVLHFAVNGVSEKDWHLVKQMGEQYPSSVIPC 812
           KLFDSHCHLQDPRI N+APQLI+TAL S + HFAVNGVSE DWHLVKQM + Y   V+PC
Sbjct: 6   KLFDSHCHLQDPRILNMAPQLIETALNSGIRHFAVNGVSENDWHLVKQMSDTY-QCVVPC 64

Query: 811 FGLHPWYVAERSPNWFNILKDFFYSTPSATVGEIGLDKGSHGKTIDFNDQVQVFRQQLEL 632
           FGLHPWYVAER+P WFN LKDFF++TP+ATVGEIGLDKGS G+ I+F +QV+VF+QQLEL
Sbjct: 65  FGLHPWYVAERTPFWFNTLKDFFHATPAATVGEIGLDKGSRGREINFVNQVEVFQQQLEL 124

Query: 631 AKELQKPVSIHCVRAFGDLLEIMQAIGPFPKGAILHSYLGSAEKVPALAKLGAYFSVSGH 452
           AKEL++PVS+HCVRAFGDLL+IMQ +GPFP G ILHSYLGSAE VP  AKLGAYFS SG+
Sbjct: 125 AKELKRPVSVHCVRAFGDLLQIMQHVGPFPAGVILHSYLGSAEMVPEFAKLGAYFSFSGY 184

Query: 451 TMSMKPQKARKMLKSVPAERILLESDAPDALPSWDLGSLQWVPGDV-------------- 314
            MSMK QKA+KML+++P ERILLESDAPDALP  DL SL WV  D               
Sbjct: 185 LMSMKEQKAKKMLRTIPVERILLESDAPDALPKSDLDSLFWVERDSYASKELQTKDINPA 244

Query: 313 -------------------SKTLNQPANIHNVLSYAASLLEMPEAELAEISYRNALRLFS 191
                               +TLN PANIH+VL Y ASLLEM + ELAEISYRNA+RLFS
Sbjct: 245 SSSGNLSDNPAARNKSVLPQETLNHPANIHSVLLYVASLLEMSKEELAEISYRNAVRLFS 304

Query: 190 CQDFEV 173
            +  ++
Sbjct: 305 FEGSKI 310


>ref|XP_002871773.1| hypothetical protein ARALYDRAFT_326186 [Arabidopsis lyrata subsp.
           lyrata] gi|297317610|gb|EFH48032.1| hypothetical protein
           ARALYDRAFT_326186 [Arabidopsis lyrata subsp. lyrata]
          Length = 325

 Score =  374 bits (959), Expect = e-101
 Identities = 189/297 (63%), Positives = 222/297 (74%), Gaps = 30/297 (10%)
 Frame = -1

Query: 991 KLFDSHCHLQDPRIYNVAPQLIQTALTSNVLHFAVNGVSEKDWHLVKQMGEQYPSSVIPC 812
           KLFD+HCHLQDPRI   APQLI +A+ S V  FAVNGVSEKDW+LVK+MG +YPS V+PC
Sbjct: 2   KLFDAHCHLQDPRIITKAPQLISSAVASGVSAFAVNGVSEKDWNLVKEMGAKYPS-VVPC 60

Query: 811 FGLHPWYVAERSPNWFNILKDFFYSTPSATVGEIGLDKGSHGKTIDFNDQVQVFRQQLEL 632
           FG+HPWYVAERSP WF  LK FF +TP+A VGEIGLDKGS G+ IDF+DQV VFRQQLEL
Sbjct: 61  FGIHPWYVAERSPQWFETLKSFFETTPTAAVGEIGLDKGSKGREIDFSDQVTVFRQQLEL 120

Query: 631 AKELQKPVSIHCVRAFGDLLEIMQAIGPFPKGAILHSYLGSAEKVPALAKLGAYFSVSGH 452
           AKEL +P S+HCVRAFGDLLEI++++GPFP G +LHSYLGSAE VP  AKLGAYFS SG 
Sbjct: 121 AKELNRPASVHCVRAFGDLLEILKSVGPFPSGVMLHSYLGSAEIVPEFAKLGAYFSFSGF 180

Query: 451 TMSMKPQKARKMLKSVPAERILLESDAPDALPSWDLGSLQWVPGDVS------------- 311
            MSM  +KA+KMLK+VP++RILLE+D+PDALP  + GSL +V GD S             
Sbjct: 181 LMSMSEKKAKKMLKAVPSDRILLETDSPDALPKAESGSLYFVDGDPSLPEEGNSAQDLDS 240

Query: 310 -----------------KTLNQPANIHNVLSYAASLLEMPEAELAEISYRNALRLFS 191
                            +TLN PANIH VL Y A LL+M   ELAE+SY+NA+RLFS
Sbjct: 241 ASNDKSNVSSDSTKLPKETLNHPANIHMVLGYVARLLDMKNEELAELSYQNAVRLFS 297


>ref|NP_568352.1| TatD related DNase [Arabidopsis thaliana]
           gi|124301002|gb|ABN04753.1| At5g17570 [Arabidopsis
           thaliana] gi|332005061|gb|AED92444.1| TatD related DNase
           [Arabidopsis thaliana]
          Length = 325

 Score =  371 bits (953), Expect = e-100
 Identities = 187/303 (61%), Positives = 224/303 (73%), Gaps = 30/303 (9%)
 Frame = -1

Query: 991 KLFDSHCHLQDPRIYNVAPQLIQTALTSNVLHFAVNGVSEKDWHLVKQMGEQYPSSVIPC 812
           KLFD+HCHLQDPRI   APQ+I +A+ S V  FAVNGVSEKDW LVK+MG +YPS V+PC
Sbjct: 2   KLFDAHCHLQDPRIITKAPQIISSAVASGVSAFAVNGVSEKDWSLVKEMGAKYPS-VVPC 60

Query: 811 FGLHPWYVAERSPNWFNILKDFFYSTPSATVGEIGLDKGSHGKTIDFNDQVQVFRQQLEL 632
           FG+HPWYVAERSP WF  LK FF +TP+A VGEIGLDKGS G+ IDF++QV VFRQQLEL
Sbjct: 61  FGIHPWYVAERSPQWFETLKSFFETTPTAAVGEIGLDKGSKGREIDFSEQVTVFRQQLEL 120

Query: 631 AKELQKPVSIHCVRAFGDLLEIMQAIGPFPKGAILHSYLGSAEKVPALAKLGAYFSVSGH 452
           AKEL+KP S+HCVRAFGDLLEI++++GPFP G +LHSYLGSAE VP  AKLGAYFS SG 
Sbjct: 121 AKELKKPASVHCVRAFGDLLEILKSVGPFPSGVMLHSYLGSAEMVPEFAKLGAYFSFSGF 180

Query: 451 TMSMKPQKARKMLKSVPAERILLESDAPDALPSWDLGSLQWVPGDVS------------- 311
            MSM  +KA+KMLK+VP++RILLE+D+PDALP  + G L +V GD S             
Sbjct: 181 LMSMSEKKAKKMLKAVPSDRILLETDSPDALPKAESGCLYFVDGDPSLPEEGNSAQDLDS 240

Query: 310 -----------------KTLNQPANIHNVLSYAASLLEMPEAELAEISYRNALRLFSCQD 182
                            +TLN PANIH VL Y A LL+M   ELAE+SY+NA+RLFS + 
Sbjct: 241 ASYDKPNVSSDSMKLTKETLNHPANIHIVLGYVAQLLDMKNEELAELSYQNAVRLFSYEG 300

Query: 181 FEV 173
            ++
Sbjct: 301 SKI 303


>dbj|BAJ88020.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 317

 Score =  365 bits (937), Expect = 1e-98
 Identities = 184/287 (64%), Positives = 214/287 (74%), Gaps = 20/287 (6%)
 Frame = -1

Query: 991 KLFDSHCHLQDPRIYNVAPQLIQTALTSNVLHFAVNGVSEKDWHLVKQMGEQYPSSVIPC 812
           +LFD+HCHLQDPRI   AP LI+ A  S V  FAVNG SEKDWHLVKQM  ++P+ V+PC
Sbjct: 19  RLFDAHCHLQDPRIAAAAPSLIRAATASGVARFAVNGTSEKDWHLVKQMAHEHPA-VVPC 77

Query: 811 FGLHPWYVAERSPNWFNILKDFFYSTPSATVGEIGLDKGSHGKTIDFNDQVQVFRQQLEL 632
           FGLHPW+V ERSP+W + L+ FF  TP A VGE GLDKGSHGKTIDF +QV+VF+QQLEL
Sbjct: 78  FGLHPWWVPERSPDWMDSLRQFFSETPEAAVGETGLDKGSHGKTIDFGEQVEVFQQQLEL 137

Query: 631 AKELQKPVSIHCVRAFGDLLEIMQAIGPFPKGAILHSYLGSAEKVPALAKLGAYFSVSGH 452
           AKEL+KPVS+HCVRAFGDLLEI++  GPFP GA+LHSYLGSAE VP LA LG YFS+SG 
Sbjct: 138 AKELEKPVSVHCVRAFGDLLEILKRTGPFPAGALLHSYLGSAEMVPDLANLGCYFSLSGF 197

Query: 451 TMSMKPQKARKMLKSVPAERILLESDAPDALPSWDLGSLQWVPGDVS------------- 311
              MK  KA+KM+K++P +RILLE+DAPDA+P  D  S   VP D S             
Sbjct: 198 LTGMKSTKAKKMVKAIPLDRILLETDAPDAVPKLDNVSPVTVPLDTSDADTEKSHSDSTS 257

Query: 310 -------KTLNQPANIHNVLSYAASLLEMPEAELAEISYRNALRLFS 191
                  ++LN PANIH VL Y ASLLEMPEAELAE SYRNA +LFS
Sbjct: 258 QAAASSNESLNHPANIHIVLKYVASLLEMPEAELAETSYRNATKLFS 304


>ref|NP_001053632.1| Os04g0577500 [Oryza sativa Japonica Group]
           gi|38345538|emb|CAD41308.2| OSJNBa0020J04.13 [Oryza
           sativa Japonica Group] gi|113565203|dbj|BAF15546.1|
           Os04g0577500 [Oryza sativa Japonica Group]
           gi|215692572|dbj|BAG87992.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215740781|dbj|BAG96937.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222629413|gb|EEE61545.1| hypothetical protein
           OsJ_15872 [Oryza sativa Japonica Group]
          Length = 311

 Score =  360 bits (924), Expect = 3e-97
 Identities = 181/287 (63%), Positives = 215/287 (74%), Gaps = 20/287 (6%)
 Frame = -1

Query: 991 KLFDSHCHLQDPRIYNVAPQLIQTALTSNVLHFAVNGVSEKDWHLVKQMGEQYPSSVIPC 812
           +LFD+HCHLQDPR+ +VAP LI+ A  + V  FAVNG SEKDWHLVKQM E+YPS V+PC
Sbjct: 13  RLFDAHCHLQDPRVLSVAPSLIRAATAAGVARFAVNGTSEKDWHLVKQMAEEYPS-VVPC 71

Query: 811 FGLHPWYVAERSPNWFNILKDFFYSTPSATVGEIGLDKGSHGKTIDFNDQVQVFRQQLEL 632
           FGLHPW+V ERSP+W + L+ FF  TP A VGEIGLDKGSHGKTIDF +QV+VF+QQLEL
Sbjct: 72  FGLHPWWVPERSPDWMDSLRRFFAETPEAAVGEIGLDKGSHGKTIDFGEQVEVFQQQLEL 131

Query: 631 AKELQKPVSIHCVRAFGDLLEIMQAIGPFPKGAILHSYLGSAEKVPALAKLGAYFSVSGH 452
           AKEL KPVS+HCVRAFGDLLEI++  GPFP G +LHSYLGSAE V +L  LG YFS+SG 
Sbjct: 132 AKELNKPVSVHCVRAFGDLLEILKRTGPFPAGVLLHSYLGSAEMVSSLEILGCYFSLSGF 191

Query: 451 TMSMKPQKARKMLKSVPAERILLESDAPDALPSWDLGSLQWVPGDVS------------- 311
              MK  KA+KMLKS+P +RILLE+DAPDALP  D  SL  VP D S             
Sbjct: 192 LTGMKSTKAKKMLKSMPLDRILLETDAPDALPKLDDISLLAVPVDSSSADNGESKKDSNS 251

Query: 310 -------KTLNQPANIHNVLSYAASLLEMPEAELAEISYRNALRLFS 191
                  ++LN P+NIH V+ Y ASLLE+ E ELAE++Y+NA +LFS
Sbjct: 252 RASTTSNESLNHPSNIHIVMKYVASLLEISEIELAEVTYKNATKLFS 298


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