BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023879
         (1046 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268899.2| PREDICTED: DNA repair protein REV1-like [Vit...   311   2e-82
emb|CBI22513.3| unnamed protein product [Vitis vinifera]              292   8e-77
ref|XP_003516774.1| PREDICTED: DNA repair protein REV1-like [Gly...   258   2e-66
ref|XP_002518660.1| terminal deoxycytidyl transferase rev1, puta...   258   2e-66
ref|XP_002313880.1| predicted protein [Populus trichocarpa] gi|2...   245   1e-62

>ref|XP_002268899.2| PREDICTED: DNA repair protein REV1-like [Vitis vinifera]
          Length = 1175

 Score =  311 bits (796), Expect = 2e-82
 Identities = 171/321 (53%), Positives = 211/321 (65%), Gaps = 5/321 (1%)
 Frame = -3

Query: 948  TLGMAWGAXXXXXXXXXXXXXXXXXXXSYMTEKNRKLREQFDT-STSYFHDSDSSGKPLF 772
            TLGMAWG+                   SYM EKNRKL+ QFD  ++S  H + SSGKP+F
Sbjct: 41   TLGMAWGSNSRSSSRSSFRNSPFSDFGSYMVEKNRKLQNQFDAGASSSSHSALSSGKPIF 100

Query: 771  HGVSIFVDGFTVPSSQELRSYMLKYGGRFENYFSRNRVTHIICSNLPDSKIKNIRSFSRG 592
            HGVS+FVDGFT+PSSQELR YM+++GG FENYFSR+RVTHIICSNLPDSKIKN+RSFS G
Sbjct: 101  HGVSVFVDGFTIPSSQELRGYMMRHGGHFENYFSRHRVTHIICSNLPDSKIKNLRSFSGG 160

Query: 591  LPVVKPTWILDSVAANKLLNWVPYQLDQLVGETRKQPKLSAFFVPKTTSMLEDGNIPANC 412
            LPVVKPTW+LDSVAANKLL+W+PYQLDQL  ETR QPKLSAFF  K+  + ED       
Sbjct: 161  LPVVKPTWVLDSVAANKLLSWIPYQLDQLANETRNQPKLSAFFALKSIPVFEDAVTHTTY 220

Query: 411  DEKLENEGPLPLGAVSQEAPSCEVGESVDCSPECNEEISTFGQEKSGEVIKEEPKYVDEE 232
                E E  +  G  S++A S E G+ ++ + + + EI     E + E I E+P   DE+
Sbjct: 221  PLVPETEDSVFKGGTSKDAVSSEGGQYLEYTRQSSGEIDDHQCENTNETIIEKPFSNDEK 280

Query: 231  VSESKMAEPS----SFDLNVGEALKCSPCKSSASATDRLGDQSKKICSTPRIGPGSNPCH 64
             SE KM E S      + ++   L+ SP + SAS +    D ++K  S+  +   SN  H
Sbjct: 281  SSEIKMEEQSFSNQEEECSIKNELQSSPHRPSASVSSYYLDNARKESSSTTVVGCSNKGH 340

Query: 63   STLGDPNFVENYFKNSRLHFI 1
            STL DPNFVENYFK SRLHFI
Sbjct: 341  STLEDPNFVENYFKYSRLHFI 361


>emb|CBI22513.3| unnamed protein product [Vitis vinifera]
          Length = 1123

 Score =  292 bits (748), Expect = 8e-77
 Identities = 169/321 (52%), Positives = 203/321 (63%), Gaps = 5/321 (1%)
 Frame = -3

Query: 948 TLGMAWGAXXXXXXXXXXXXXXXXXXXSYMTEKNRKLREQFDT-STSYFHDSDSSGKPLF 772
           TLGMAWG+                   SYM EKNRKL+ QFD  ++S  H + SSGKP+F
Sbjct: 41  TLGMAWGSNSRSSSRSSFRNSPFSDFGSYMVEKNRKLQNQFDAGASSSSHSALSSGKPIF 100

Query: 771 HGVSIFVDGFTVPSSQELRSYMLKYGGRFENYFSRNRVTHIICSNLPDSKIKNIRSFSRG 592
           HGVS+FVDGFT+PSSQELR YM+++GG FENYFSR+RVTHIICSNLPDSKIKN+RSFS G
Sbjct: 101 HGVSVFVDGFTIPSSQELRGYMMRHGGHFENYFSRHRVTHIICSNLPDSKIKNLRSFSGG 160

Query: 591 LPVVKPTWILDSVAANKLLNWVPYQLDQLVGETRKQPKLSAFFVPKTTSMLEDGNIPANC 412
           LPVVKPTW+LDSVAANKLL+W+PYQLDQL  ETR QPKLSAFF  K+  + ED       
Sbjct: 161 LPVVKPTWVLDSVAANKLLSWIPYQLDQLANETRNQPKLSAFFALKSIPVFEDA------ 214

Query: 411 DEKLENEGPLPLGAVSQEAPSCEVGESVDCSPECNEEISTFGQEKSGEVIKEEPKYVDEE 232
                     PL           V E+ D S + + EI     E + E I E+P   DE+
Sbjct: 215 ----VTHTTYPL-----------VPETED-SVQSSGEIDDHQCENTNETIIEKPFSNDEK 258

Query: 231 VSESKMAEPS----SFDLNVGEALKCSPCKSSASATDRLGDQSKKICSTPRIGPGSNPCH 64
            SE KM E S      + ++   L+ SP + SAS +    D ++K  S+  +   SN  H
Sbjct: 259 SSEIKMEEQSFSNQEEECSIKNELQSSPHRPSASVSSYYLDNARKESSSTTVVGCSNKGH 318

Query: 63  STLGDPNFVENYFKNSRLHFI 1
           STL DPNFVENYFK SRLHFI
Sbjct: 319 STLEDPNFVENYFKYSRLHFI 339


>ref|XP_003516774.1| PREDICTED: DNA repair protein REV1-like [Glycine max]
          Length = 1115

 Score =  258 bits (659), Expect = 2e-66
 Identities = 154/318 (48%), Positives = 188/318 (59%), Gaps = 2/318 (0%)
 Frame = -3

Query: 948 TLGMAWGAXXXXXXXXXXXXXXXXXXXSYMTEKNRKLREQFDTSTSYFHDSDSSGKPLFH 769
           TLG AWG+                    YMTEKNRKL  QF+   S    S +    LF 
Sbjct: 39  TLGAAWGSKSNSRKPAFSDFAS------YMTEKNRKLHNQFEAQAST--SSLTLSASLFS 90

Query: 768 GVSIFVDGFTVPSSQELRSYMLKYGGRFENYFSRNRVTHIICSNLPDSKIKNIRSFSRGL 589
           GVSIFVDGFT+PS+QELRSYMLKYGGRFENYFSR+RVTHIICSNLPDSK+KN+R+FS GL
Sbjct: 91  GVSIFVDGFTIPSNQELRSYMLKYGGRFENYFSRHRVTHIICSNLPDSKVKNLRAFSAGL 150

Query: 588 PVVKPTWILDSVAANKLLNWVPYQLDQLVGETRKQPKLSAFFVPKTTSMLEDGNIPANCD 409
           PVVKPTWILDSVAAN+LL+WVPYQLDQL      QPKLSAFF  K++ M ED      C 
Sbjct: 151 PVVKPTWILDSVAANRLLSWVPYQLDQL---ANNQPKLSAFFTLKSSKMSEDAYTNDLCQ 207

Query: 408 --EKLENEGPLPLGAVSQEAPSCEVGESVDCSPECNEEISTFGQEKSGEVIKEEPKYVDE 235
               +E+       + S++  S +VG+  + S + + E      E +  ++ EE   V E
Sbjct: 208 VVSDIEDSSMRVGRSDSEDRHSSKVGDMSELSGQISTESDDTIPENTNAIMMEELTSVRE 267

Query: 234 EVSESKMAEPSSFDLNVGEALKCSPCKSSASATDRLGDQSKKICSTPRIGPGSNPCHSTL 55
               S  A     ++  GE        S++ +T    + + K          S  CHSTL
Sbjct: 268 HAGGSNAATKDERNVK-GELEPAHQAPSTSFSTPCSDELNVKEYPNSSGTKPSKQCHSTL 326

Query: 54  GDPNFVENYFKNSRLHFI 1
            DPNFVENYFK+SRLHFI
Sbjct: 327 ADPNFVENYFKSSRLHFI 344


>ref|XP_002518660.1| terminal deoxycytidyl transferase rev1, putative [Ricinus communis]
           gi|223542041|gb|EEF43585.1| terminal deoxycytidyl
           transferase rev1, putative [Ricinus communis]
          Length = 1200

 Score =  258 bits (659), Expect = 2e-66
 Identities = 161/325 (49%), Positives = 185/325 (56%), Gaps = 9/325 (2%)
 Frame = -3

Query: 948 TLGMAWGAXXXXXXXXXXXXXXXXXXXSYMTEKNRKLREQFDTSTSYFHDSDSSGKPLFH 769
           TLGMAWG+                   SYM  KNRKL+ QF+ + S   + D     +F+
Sbjct: 39  TLGMAWGSNSVSSSRSSFRSSPFSDFSSYMVVKNRKLQNQFNAAASNSSNGDGL---IFN 95

Query: 768 GVSIFVDGFTVPSSQELRSYMLKYGGRFENYFSRNRVTHIICSNLPDSKIKNIRSFSRGL 589
           GVSIFVDGFT PSSQELR YMLKYGGRFENYFSR+RVTHIICSNLPDSKIKN+RSFS GL
Sbjct: 96  GVSIFVDGFTSPSSQELRGYMLKYGGRFENYFSRHRVTHIICSNLPDSKIKNLRSFSGGL 155

Query: 588 PVVKPTWILDSVAANKLLNWVPYQLDQLVGETRKQPKLSAFFVPKTTSMLEDGNIPANCD 409
           PVV+P WILDSVAANKLL+WVPYQL+QL      QPKLSAFF  K  +  ED     N +
Sbjct: 156 PVVRPAWILDSVAANKLLSWVPYQLEQL---ANNQPKLSAFFCMKNKAASED---DLNIE 209

Query: 408 EKLENEGPLPLGAVSQEAPSCEVGESVDCS---------PECNEEISTFGQEKSGEVIKE 256
                  P   G  SQ+    EV + V            P+C  E ++    KS E+  E
Sbjct: 210 AFQVMLDPSLKGGTSQDTNLPEVNDPVKYGKPIDGQFDYPDCEIEETSSRSSKSSELRIE 269

Query: 255 EPKYVDEEVSESKMAEPSSFDLNVGEALKCSPCKSSASATDRLGDQSKKICSTPRIGPGS 76
           EP   + E              NV   L+ SP   S  +T            TP I   S
Sbjct: 270 EPSNTEGE-------------NNVYHELQSSPRDHSIEST-----------PTPAIARPS 305

Query: 75  NPCHSTLGDPNFVENYFKNSRLHFI 1
           NP HSTL DPNFVENYFK+SRLHFI
Sbjct: 306 NPRHSTLEDPNFVENYFKSSRLHFI 330


>ref|XP_002313880.1| predicted protein [Populus trichocarpa] gi|222850288|gb|EEE87835.1|
           predicted protein [Populus trichocarpa]
          Length = 1191

 Score =  245 bits (625), Expect = 1e-62
 Identities = 155/327 (47%), Positives = 194/327 (59%), Gaps = 14/327 (4%)
 Frame = -3

Query: 948 TLGMAWGAXXXXXXXXXXXXXXXXXXXSYMTEKNRKLREQFDTSTSYF-HDSDSSGKPLF 772
           TLGM  GA                   SYM EKNRKL+ QF+   S   H   SSGK +F
Sbjct: 36  TLGMGRGANSLSSSRPSFRNSPFSNFGSYMVEKNRKLQHQFEAEASTSSHPGSSSGKLIF 95

Query: 771 HGVSIFVDGFTVPSSQELRSYMLKYGGRFENYFSRNRVTHIICSNLPDSKIKNIRSFSRG 592
            GVSIF+DGFT+PS+QELR+YMLKYGGRF NYFSR++VTHIICS+LPDSKIKN+RSFS G
Sbjct: 96  QGVSIFIDGFTIPSNQELRAYMLKYGGRFANYFSRHQVTHIICSSLPDSKIKNLRSFSGG 155

Query: 591 LPVVKPTWILDSVAANKLLNWVPYQLDQLVGETRKQPKLSAFFVPKTTSMLEDGNIPANC 412
           LPVVKP WILDS+ ANKLLNW PYQL+QL      QPKLSAFF  K+  + E+      C
Sbjct: 156 LPVVKPEWILDSIVANKLLNWFPYQLNQL---ANNQPKLSAFFTLKSNPVPENVLTDEVC 212

Query: 411 DEKLENEGPLPLGAVSQEAPSCEVGESVDCSPECNEEISTFGQEKSGEVIKEEPKYVDEE 232
              L+   P+  G  +++    EV E V  +            E++GE++ ++P +  EE
Sbjct: 213 QVNLD---PILKGGTTKDVYISEVDEPVRFA------------EQAGELL-DDPNHQLEE 256

Query: 231 V-------SESKMAEPSSFDLNVGEAL----KCSPCKSSASATDRL--GDQSKKICSTPR 91
           +       +E KMAE  S D   G ++    +  P   SAS +       +S    S+  
Sbjct: 257 LNGSSGKSAEVKMAEFGSSDAEYGNSVNSKHQSGPDLFSASVSGYCLHNQRSDGSLSSEP 316

Query: 90  IGPGSNPCHSTLGDPNFVENYFKNSRL 10
            GP SN  HSTLGDPNFVENYFKN ++
Sbjct: 317 SGP-SNRRHSTLGDPNFVENYFKNPQM 342