BLASTX nr result

ID: Coptis23_contig00023855 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023855
         (750 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74802.1| hypothetical protein VITISV_006289 [Vitis vinifera]   295   9e-78
ref|XP_002272448.2| PREDICTED: uncharacterized protein LOC100253...   294   1e-77
emb|CBI40314.3| unnamed protein product [Vitis vinifera]              294   1e-77
ref|XP_002302575.1| predicted protein [Populus trichocarpa] gi|2...   280   2e-73
ref|XP_002511829.1| conserved hypothetical protein [Ricinus comm...   273   3e-71

>emb|CAN74802.1| hypothetical protein VITISV_006289 [Vitis vinifera]
          Length = 705

 Score =  295 bits (754), Expect = 9e-78
 Identities = 149/219 (68%), Positives = 166/219 (75%), Gaps = 8/219 (3%)
 Frame = -3

Query: 748  YTNGPAGGGGISTGHKKEIILQKHLVQRGSIFWQTGAHHTKS--------GGGKDLGETQ 593
            YTNGPAGGGGISTGHKK+I+L+K LV+R  +FWQTG  H K         G  +DL E  
Sbjct: 490  YTNGPAGGGGISTGHKKDIVLEKKLVRREHVFWQTGVKHNKMMNSNNQGVGIKEDLLEIH 549

Query: 592  VTRAPLHHRMVLENVQSANREVSSQVIDCCPAPSGQKIPLYDVAHSRVGDKGNDLNFSII 413
            V + P     +L   Q    +  S  ID  PAPSGQKIPLY VAHSR GDKGNDLNFSII
Sbjct: 550  VLQEPA----LLPTAQEHPSDFWSSEIDLFPAPSGQKIPLYSVAHSRTGDKGNDLNFSII 605

Query: 412  PHYPPDIERLKVTITPEWVKRVVSPLLNASSFPDTDATEKRDNWINEHVKVEIYEAKGIC 233
            PH+PPDIERLK+ ITPEWVK  VS LLN SSFPD+DA  KRD W+ EHVKVEIYE KGI 
Sbjct: 606  PHFPPDIERLKIIITPEWVKAAVSTLLNTSSFPDSDAINKRDKWVAEHVKVEIYEVKGIH 665

Query: 232  SLNVVVRNILDGGVNCSRRIDRHGKTISDLILCQQVLLP 116
            SLN++VRNILDGGVNCSRRIDRHGKTISDLILCQ+V+LP
Sbjct: 666  SLNILVRNILDGGVNCSRRIDRHGKTISDLILCQKVVLP 704


>ref|XP_002272448.2| PREDICTED: uncharacterized protein LOC100253419 [Vitis vinifera]
          Length = 641

 Score =  294 bits (753), Expect = 1e-77
 Identities = 149/219 (68%), Positives = 166/219 (75%), Gaps = 8/219 (3%)
 Frame = -3

Query: 748  YTNGPAGGGGISTGHKKEIILQKHLVQRGSIFWQTGAHHTKS--------GGGKDLGETQ 593
            YTNGPAGGGGISTGHKK+I+L+K LV+R  +FWQTG  H K         G  +DL E  
Sbjct: 426  YTNGPAGGGGISTGHKKDIVLEKKLVRREYVFWQTGVKHNKMMNSNNQGVGIKEDLLEIH 485

Query: 592  VTRAPLHHRMVLENVQSANREVSSQVIDCCPAPSGQKIPLYDVAHSRVGDKGNDLNFSII 413
            V + P     +L   Q    +  S  ID  PAPSGQKIPLY VAHSR GDKGNDLNFSII
Sbjct: 486  VLQEPA----LLPTAQEHPSDFWSSEIDLFPAPSGQKIPLYSVAHSRTGDKGNDLNFSII 541

Query: 412  PHYPPDIERLKVTITPEWVKRVVSPLLNASSFPDTDATEKRDNWINEHVKVEIYEAKGIC 233
            PH+PPDIERLK+ ITPEWVK  VS LLN SSFPD+DA  KRD W+ EHVKVEIYE KGI 
Sbjct: 542  PHFPPDIERLKIIITPEWVKAAVSTLLNTSSFPDSDAINKRDKWVAEHVKVEIYEVKGIH 601

Query: 232  SLNVVVRNILDGGVNCSRRIDRHGKTISDLILCQQVLLP 116
            SLN++VRNILDGGVNCSRRIDRHGKTISDLILCQ+V+LP
Sbjct: 602  SLNILVRNILDGGVNCSRRIDRHGKTISDLILCQKVVLP 640


>emb|CBI40314.3| unnamed protein product [Vitis vinifera]
          Length = 646

 Score =  294 bits (753), Expect = 1e-77
 Identities = 149/219 (68%), Positives = 166/219 (75%), Gaps = 8/219 (3%)
 Frame = -3

Query: 748  YTNGPAGGGGISTGHKKEIILQKHLVQRGSIFWQTGAHHTKS--------GGGKDLGETQ 593
            YTNGPAGGGGISTGHKK+I+L+K LV+R  +FWQTG  H K         G  +DL E  
Sbjct: 431  YTNGPAGGGGISTGHKKDIVLEKKLVRREYVFWQTGVKHNKMMNSNNQGVGIKEDLLEIH 490

Query: 592  VTRAPLHHRMVLENVQSANREVSSQVIDCCPAPSGQKIPLYDVAHSRVGDKGNDLNFSII 413
            V + P     +L   Q    +  S  ID  PAPSGQKIPLY VAHSR GDKGNDLNFSII
Sbjct: 491  VLQEPA----LLPTAQEHPSDFWSSEIDLFPAPSGQKIPLYSVAHSRTGDKGNDLNFSII 546

Query: 412  PHYPPDIERLKVTITPEWVKRVVSPLLNASSFPDTDATEKRDNWINEHVKVEIYEAKGIC 233
            PH+PPDIERLK+ ITPEWVK  VS LLN SSFPD+DA  KRD W+ EHVKVEIYE KGI 
Sbjct: 547  PHFPPDIERLKIIITPEWVKAAVSTLLNTSSFPDSDAINKRDKWVAEHVKVEIYEVKGIH 606

Query: 232  SLNVVVRNILDGGVNCSRRIDRHGKTISDLILCQQVLLP 116
            SLN++VRNILDGGVNCSRRIDRHGKTISDLILCQ+V+LP
Sbjct: 607  SLNILVRNILDGGVNCSRRIDRHGKTISDLILCQKVVLP 645


>ref|XP_002302575.1| predicted protein [Populus trichocarpa] gi|222844301|gb|EEE81848.1|
            predicted protein [Populus trichocarpa]
          Length = 622

 Score =  280 bits (717), Expect = 2e-73
 Identities = 144/211 (68%), Positives = 165/211 (78%), Gaps = 1/211 (0%)
 Frame = -3

Query: 748  YTNGPAGGGGISTGHKKEIILQKHLVQRGSIFWQTGAHHTKSGGGKDLGETQVTRAPLHH 569
            YTNGPAGGGG+STGHKKEIIL K LV+R S+FW TG    KS  G    + +V    L  
Sbjct: 414  YTNGPAGGGGVSTGHKKEIILGKQLVERESVFWWTGV---KSWKGMRPNKEEVDLGNLVK 470

Query: 568  RMVLENVQSA-NREVSSQVIDCCPAPSGQKIPLYDVAHSRVGDKGNDLNFSIIPHYPPDI 392
              +  +  S  + + SS VI+  PAPSGQKIPLY VAHSRVGDKGND+NFSIIPH+P DI
Sbjct: 471  TTIWHDPLSPPHPKSSSPVIETSPAPSGQKIPLYSVAHSRVGDKGNDMNFSIIPHFPSDI 530

Query: 391  ERLKVTITPEWVKRVVSPLLNASSFPDTDATEKRDNWINEHVKVEIYEAKGICSLNVVVR 212
            ERLK+ ITP+WVK VVS LLN SSFPD+ +T KRD W++EHV VEIYE KGI SLN+VVR
Sbjct: 531  ERLKLIITPQWVKEVVSTLLNTSSFPDSVSTMKRDKWVSEHVNVEIYEVKGIKSLNIVVR 590

Query: 211  NILDGGVNCSRRIDRHGKTISDLILCQQVLL 119
            NILDGGVNCSRRIDRHGKTISDLILCQ+V+L
Sbjct: 591  NILDGGVNCSRRIDRHGKTISDLILCQKVVL 621


>ref|XP_002511829.1| conserved hypothetical protein [Ricinus communis]
            gi|223549009|gb|EEF50498.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 607

 Score =  273 bits (698), Expect = 3e-71
 Identities = 142/219 (64%), Positives = 164/219 (74%), Gaps = 8/219 (3%)
 Frame = -3

Query: 748  YTNGPAGGGGISTGHKKEIILQKHLVQRGSIFWQTGAHHTKSGGGKDLGETQ----VTRA 581
            YTNGPAGGGGISTG+KKEIIL+K LV R  +FW TG + TK G   D  ET     + R+
Sbjct: 389  YTNGPAGGGGISTGYKKEIILKKQLVGRQDVFWWTGVNCTK-GMNSDKKETDHGDVMKRS 447

Query: 580  PLHHR----MVLENVQSANREVSSQVIDCCPAPSGQKIPLYDVAHSRVGDKGNDLNFSII 413
             L        +  N+     E SS VI   PAPSG+KIPLY VAHSR GDKGNDLNFSII
Sbjct: 448  ALPKATSPPFLEANMDDCCVECSSPVIKATPAPSGKKIPLYSVAHSRTGDKGNDLNFSII 507

Query: 412  PHYPPDIERLKVTITPEWVKRVVSPLLNASSFPDTDATEKRDNWINEHVKVEIYEAKGIC 233
            PH+ PDIERLK+ +TP+WVK V+S LLN SSFPD+ A  KRD W+NEHV +EIYE +GI 
Sbjct: 508  PHFAPDIERLKIVVTPQWVKGVLSTLLNTSSFPDSVAIMKRDKWMNEHVNIEIYEVRGIH 567

Query: 232  SLNVVVRNILDGGVNCSRRIDRHGKTISDLILCQQVLLP 116
            SLNVVVRN+LDGGVNCSRRIDRHGKTISD+IL QQ++LP
Sbjct: 568  SLNVVVRNLLDGGVNCSRRIDRHGKTISDIILPQQIVLP 606


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