BLASTX nr result

ID: Coptis23_contig00023837 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023837
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69471.1| hypothetical protein VITISV_014372 [Vitis vinifera]    57   1e-06
emb|CAN77850.1| hypothetical protein VITISV_020834 [Vitis vinifera]    57   1e-06
ref|XP_002272748.2| PREDICTED: uncharacterized protein LOC100256...    56   3e-06
emb|CAN82456.1| hypothetical protein VITISV_010028 [Vitis vinifera]    56   3e-06
emb|CAN79190.1| hypothetical protein VITISV_000232 [Vitis vinifera]    56   3e-06

>emb|CAN69471.1| hypothetical protein VITISV_014372 [Vitis vinifera]
          Length = 731

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 34/86 (39%), Positives = 42/86 (48%)
 Frame = -2

Query: 265 PSAASDHSALTIKLDGSTSPLCKPFRFFEMWTHDPSCKDTIANAWKDLSPENYVGMPALT 86
           P   SDHS + ++  G +S    PFRF  MW      KD I + W   S E Y    +  
Sbjct: 601 PRLVSDHSPIVLEAGGFSSGR-SPFRFENMWLKIDGFKDLIRSWWNGYSVEGY---SSHC 656

Query: 85  VHRKMKFTSKKLKKWNN*VFGNVSLN 8
           +  K+K   K LKKWN  V GNVS N
Sbjct: 657 IAEKLKALKKDLKKWNKEVVGNVSFN 682


>emb|CAN77850.1| hypothetical protein VITISV_020834 [Vitis vinifera]
          Length = 1905

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 33/86 (38%), Positives = 42/86 (48%)
 Frame = -2

Query: 265  PSAASDHSALTIKLDGSTSPLCKPFRFFEMWTHDPSCKDTIANAWKDLSPENYVGMPALT 86
            P   SDHS + ++  G +S    PFRF  MW      KD + + W   S E Y    +  
Sbjct: 910  PRLVSDHSPIILEAGGFSSGK-SPFRFENMWLXIDGFKDLVKSWWNGYSXEGY---SSHC 965

Query: 85   VHRKMKFTSKKLKKWNN*VFGNVSLN 8
            +  K+K   K LKKWN  V GNVS N
Sbjct: 966  IXEKLKALKKDLKKWNKEVVGNVSFN 991


>ref|XP_002272748.2| PREDICTED: uncharacterized protein LOC100256388 [Vitis vinifera]
          Length = 2667

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 33/86 (38%), Positives = 42/86 (48%)
 Frame = -2

Query: 265 PSAASDHSALTIKLDGSTSPLCKPFRFFEMWTHDPSCKDTIANAWKDLSPENYVGMPALT 86
           P   SDHS + ++  G +S    PFRF  MW      KD + + W   S E   G  +  
Sbjct: 221 PRLVSDHSPIILEAGGFSSGK-NPFRFENMWLKIEGFKDLVKSWWNGYSVE---GFSSHC 276

Query: 85  VHRKMKFTSKKLKKWNN*VFGNVSLN 8
           +  K+K   K LKKWN  V GNVS N
Sbjct: 277 IAEKLKALKKDLKKWNKEVVGNVSFN 302


>emb|CAN82456.1| hypothetical protein VITISV_010028 [Vitis vinifera]
          Length = 4128

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 33/86 (38%), Positives = 42/86 (48%)
 Frame = -2

Query: 265  PSAASDHSALTIKLDGSTSPLCKPFRFFEMWTHDPSCKDTIANAWKDLSPENYVGMPALT 86
            P   SDHS + ++  G +S    PFRF  MW      KD + + W   S E   G  +  
Sbjct: 2622 PRLVSDHSPIILEAGGFSSGK-SPFRFENMWLKIEGFKDLVKSWWNGYSVE---GFSSHC 2677

Query: 85   VHRKMKFTSKKLKKWNN*VFGNVSLN 8
            +  K+K   K LKKWN  V GNVS N
Sbjct: 2678 IAEKLKALKKDLKKWNKEVVGNVSFN 2703


>emb|CAN79190.1| hypothetical protein VITISV_000232 [Vitis vinifera]
          Length = 1935

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
 Frame = -2

Query: 298  ELFPHASVHNSPSAASDHSALTIKLDGSTSPLCK---PFRFFEMWTHDPSCKDTIANAWK 128
            +LFP +     P   SDH  + ++    T+P      PFRF  MW H PS K++  + W+
Sbjct: 934  QLFPQSLQDVLPRWTSDHWPIVLE----TNPFKXGPTPFRFENMWLHHPSFKESFGSWWR 989

Query: 127  DLSPENYVGMPALTVHRKMKFTSKKLKKWNN*VFGNV 17
            +   + + G   +   RK++F   KLK+WN   FG++
Sbjct: 990  EFQGDGWEGHKFM---RKLQFLKAKLKEWNKNAFGDL 1023


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