BLASTX nr result

ID: Coptis23_contig00023826 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023826
         (214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32194.3| unnamed protein product [Vitis vinifera]              102   4e-20
ref|XP_002269272.1| PREDICTED: box C/D snoRNA protein 1 [Vitis v...   102   4e-20
ref|XP_002512150.1| conserved hypothetical protein [Ricinus comm...   101   7e-20
emb|CBI25139.3| unnamed protein product [Vitis vinifera]              100   2e-19
ref|XP_002265717.1| PREDICTED: box C/D snoRNA protein 1 [Vitis v...   100   2e-19

>emb|CBI32194.3| unnamed protein product [Vitis vinifera]
          Length = 383

 Score =  102 bits (253), Expect = 4e-20
 Identities = 45/71 (63%), Positives = 57/71 (80%)
 Frame = -2

Query: 213 PWKNQLRPFSEEQLDSLKFFIRKNAKGSNSPFRELDIKAPISEQLADIVIVEYPVIHVFL 34
           PW ++L+PF  EQLD LKFFIRK  KG  SPF ELDI+API +Q A++ I+EYP IHVFL
Sbjct: 181 PWNHKLKPFCAEQLDCLKFFIRKYPKGPRSPFHELDIRAPIRQQFANLAILEYPQIHVFL 240

Query: 33  PSASYEFDIVE 1
           PS SY+FD+++
Sbjct: 241 PSHSYDFDVIK 251


>ref|XP_002269272.1| PREDICTED: box C/D snoRNA protein 1 [Vitis vinifera]
           gi|147778999|emb|CAN60314.1| hypothetical protein
           VITISV_036305 [Vitis vinifera]
          Length = 385

 Score =  102 bits (253), Expect = 4e-20
 Identities = 45/71 (63%), Positives = 57/71 (80%)
 Frame = -2

Query: 213 PWKNQLRPFSEEQLDSLKFFIRKNAKGSNSPFRELDIKAPISEQLADIVIVEYPVIHVFL 34
           PW ++L+PF  EQLD LKFFIRK  KG  SPF ELDI+API +Q A++ I+EYP IHVFL
Sbjct: 181 PWNHKLKPFCAEQLDCLKFFIRKYPKGPRSPFHELDIRAPIRQQFANLAILEYPQIHVFL 240

Query: 33  PSASYEFDIVE 1
           PS SY+FD+++
Sbjct: 241 PSHSYDFDVIK 251


>ref|XP_002512150.1| conserved hypothetical protein [Ricinus communis]
           gi|223548694|gb|EEF50184.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 411

 Score =  101 bits (251), Expect = 7e-20
 Identities = 48/71 (67%), Positives = 58/71 (81%)
 Frame = -2

Query: 213 PWKNQLRPFSEEQLDSLKFFIRKNAKGSNSPFRELDIKAPISEQLADIVIVEYPVIHVFL 34
           PW +QLR F EEQLDSLKFFIRK  KG  SPF ELDIKAP+ +QLA+IVI+E P+IHVFL
Sbjct: 183 PWNHQLRQFCEEQLDSLKFFIRKYPKGPKSPFCELDIKAPLRQQLANIVILENPIIHVFL 242

Query: 33  PSASYEFDIVE 1
           PS   +F++V+
Sbjct: 243 PSHGCDFEVVK 253


>emb|CBI25139.3| unnamed protein product [Vitis vinifera]
          Length = 340

 Score =  100 bits (248), Expect = 2e-19
 Identities = 46/68 (67%), Positives = 54/68 (79%)
 Frame = -2

Query: 213 PWKNQLRPFSEEQLDSLKFFIRKNAKGSNSPFRELDIKAPISEQLADIVIVEYPVIHVFL 34
           PW ++L+PF  EQLD LKFFIRK  KG  SPF ELDI API +Q A++VI+EYP IHVFL
Sbjct: 231 PWNHKLKPFCAEQLDCLKFFIRKYPKGPRSPFHELDISAPIRQQFANLVILEYPQIHVFL 290

Query: 33  PSASYEFD 10
           PS SY+FD
Sbjct: 291 PSHSYDFD 298


>ref|XP_002265717.1| PREDICTED: box C/D snoRNA protein 1 [Vitis vinifera]
          Length = 385

 Score =  100 bits (248), Expect = 2e-19
 Identities = 46/68 (67%), Positives = 54/68 (79%)
 Frame = -2

Query: 213 PWKNQLRPFSEEQLDSLKFFIRKNAKGSNSPFRELDIKAPISEQLADIVIVEYPVIHVFL 34
           PW ++L+PF  EQLD LKFFIRK  KG  SPF ELDI API +Q A++VI+EYP IHVFL
Sbjct: 181 PWNHKLKPFCAEQLDCLKFFIRKYPKGPRSPFHELDISAPIRQQFANLVILEYPQIHVFL 240

Query: 33  PSASYEFD 10
           PS SY+FD
Sbjct: 241 PSHSYDFD 248


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