BLASTX nr result

ID: Coptis23_contig00023822 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023822
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001190388.1| ABC1 family protein [Arabidopsis thaliana] g...   102   4e-20
gb|AAK82520.1| AT5g24810/F6A4_20 [Arabidopsis thaliana]               102   4e-20
ref|NP_568458.1| ABC1 family protein [Arabidopsis thaliana] gi|1...   102   4e-20
ref|XP_002874225.1| ABC1 family protein [Arabidopsis lyrata subs...   101   5e-20
ref|XP_003588594.1| aarF domain-containing protein kinase, putat...   101   7e-20

>ref|NP_001190388.1| ABC1 family protein [Arabidopsis thaliana]
           gi|332005982|gb|AED93365.1| ABC1 family protein
           [Arabidopsis thaliana]
          Length = 1040

 Score =  102 bits (253), Expect = 4e-20
 Identities = 51/73 (69%), Positives = 61/73 (83%), Gaps = 1/73 (1%)
 Frame = -2

Query: 217 GVESRLATLTVDMEDLKLLSGI-SRPELPSTFQSGQISQMVSSLPILFNSLNIHRAIIPA 41
           GVESRLATLT D +++  LS I S+PELPSTFQ  +I QM ++LP+LFN+LN+ RAIIPA
Sbjct: 748 GVESRLATLTFDTDEMSKLSSIASQPELPSTFQPDKIIQMATNLPVLFNTLNVRRAIIPA 807

Query: 40  ANGHCSTRALARY 2
           ANGHCS RALARY
Sbjct: 808 ANGHCSARALARY 820


>gb|AAK82520.1| AT5g24810/F6A4_20 [Arabidopsis thaliana]
          Length = 690

 Score =  102 bits (253), Expect = 4e-20
 Identities = 51/73 (69%), Positives = 61/73 (83%), Gaps = 1/73 (1%)
 Frame = -2

Query: 217 GVESRLATLTVDMEDLKLLSGI-SRPELPSTFQSGQISQMVSSLPILFNSLNIHRAIIPA 41
           GVESRLATLT D +++  LS I S+PELPSTFQ  +I QM ++LP+LFN+LN+ RAIIPA
Sbjct: 487 GVESRLATLTFDTDEMSKLSSIASQPELPSTFQPDKIIQMATNLPVLFNTLNVRRAIIPA 546

Query: 40  ANGHCSTRALARY 2
           ANGHCS RALARY
Sbjct: 547 ANGHCSARALARY 559


>ref|NP_568458.1| ABC1 family protein [Arabidopsis thaliana]
           gi|16649083|gb|AAL24393.1| Unknown protein [Arabidopsis
           thaliana] gi|33589758|gb|AAQ22645.1| At5g24810/F6A4.20
           [Arabidopsis thaliana] gi|332005981|gb|AED93364.1| ABC1
           family protein [Arabidopsis thaliana]
          Length = 1009

 Score =  102 bits (253), Expect = 4e-20
 Identities = 51/73 (69%), Positives = 61/73 (83%), Gaps = 1/73 (1%)
 Frame = -2

Query: 217 GVESRLATLTVDMEDLKLLSGI-SRPELPSTFQSGQISQMVSSLPILFNSLNIHRAIIPA 41
           GVESRLATLT D +++  LS I S+PELPSTFQ  +I QM ++LP+LFN+LN+ RAIIPA
Sbjct: 717 GVESRLATLTFDTDEMSKLSSIASQPELPSTFQPDKIIQMATNLPVLFNTLNVRRAIIPA 776

Query: 40  ANGHCSTRALARY 2
           ANGHCS RALARY
Sbjct: 777 ANGHCSARALARY 789


>ref|XP_002874225.1| ABC1 family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297320062|gb|EFH50484.1| ABC1 family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1011

 Score =  101 bits (252), Expect = 5e-20
 Identities = 50/73 (68%), Positives = 62/73 (84%), Gaps = 1/73 (1%)
 Frame = -2

Query: 217 GVESRLATLTVDMEDLKLLSGI-SRPELPSTFQSGQISQMVSSLPILFNSLNIHRAIIPA 41
           GVESRLATLT+D +++  LS I S+PELPSTFQ  +I Q+ ++LP+LFN+LN+ RAIIPA
Sbjct: 717 GVESRLATLTLDTDEMSKLSSIASQPELPSTFQPDKILQLATNLPVLFNTLNVRRAIIPA 776

Query: 40  ANGHCSTRALARY 2
           ANGHCS RALARY
Sbjct: 777 ANGHCSARALARY 789


>ref|XP_003588594.1| aarF domain-containing protein kinase, putative [Medicago
           truncatula] gi|355477642|gb|AES58845.1| aarF
           domain-containing protein kinase, putative [Medicago
           truncatula]
          Length = 953

 Score =  101 bits (251), Expect = 7e-20
 Identities = 53/73 (72%), Positives = 60/73 (82%), Gaps = 1/73 (1%)
 Frame = -2

Query: 217 GVESRLATLTVDMEDLKLLSGI-SRPELPSTFQSGQISQMVSSLPILFNSLNIHRAIIPA 41
           GVESRLA LTVD +DL  LS I SRPELPSTFQ  QI+QM +S+P +FN+LN+ RAIIPA
Sbjct: 680 GVESRLAALTVDTDDLSKLSAIGSRPELPSTFQPQQIAQMATSVPPIFNTLNVRRAIIPA 739

Query: 40  ANGHCSTRALARY 2
           ANGH S RALARY
Sbjct: 740 ANGHVSARALARY 752


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