BLASTX nr result

ID: Coptis23_contig00023817 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023817
         (1142 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003636638.1| ABC transporter B family member [Medicago tr...   380   e-103
ref|XP_002280266.2| PREDICTED: ABC transporter B family member 2...   376   e-102
ref|XP_002321879.1| predicted protein [Populus trichocarpa] gi|2...   374   e-101
ref|XP_002510849.1| ATNAP8, putative [Ricinus communis] gi|22354...   373   e-101
ref|XP_004143641.1| PREDICTED: ABC transporter B family member 2...   371   e-100

>ref|XP_003636638.1| ABC transporter B family member [Medicago truncatula]
            gi|355502573|gb|AES83776.1| ABC transporter B family
            member [Medicago truncatula]
          Length = 728

 Score =  380 bits (977), Expect = e-103
 Identities = 197/247 (79%), Positives = 210/247 (85%)
 Frame = +3

Query: 3    GDICLEDVHFSYPLRPDVKVLSGLNLTLKCGTVTALVGSSGAGKSTIVQLLARFYEPTRG 182
            GDICLEDV+FSYPLRPDV++LSGLNL LKCGTVTALVG+SGAGKSTIVQLL+RFYEPTRG
Sbjct: 482  GDICLEDVYFSYPLRPDVEILSGLNLRLKCGTVTALVGASGAGKSTIVQLLSRFYEPTRG 541

Query: 183  RITVSGEDVRTFDKSEWARVVSIVNQEPVLFSASVGENIAYGLPDDNVSXXXXXXXXXXX 362
            RITV GEDVRTFDKSEWARVVSIVNQEPVLFS SVGENI+YGLPDD+VS           
Sbjct: 542  RITVGGEDVRTFDKSEWARVVSIVNQEPVLFSVSVGENISYGLPDDDVSKDDVIKAAKAA 601

Query: 363  XXHEFIISLPQGYDTXXXXXXXXXXXXXXXXXAIARALLKNAPILILDEATSALDAVSER 542
              H+FIISLPQGYDT                 AIARALLKNAP+LILDEATSALD VSER
Sbjct: 602  NAHDFIISLPQGYDTLVGERGGLLSGGQRQRVAIARALLKNAPVLILDEATSALDTVSER 661

Query: 543  LVQDALNQLMKGRTTLVIAHRLSTVQNAHQIALCSDGKIEELGTHSELLARKGQYASLVG 722
            LVQ+ALN LMKGRTTLVIAHRLSTVQNAHQIALCS+G+I ELGTH ELLA+KGQYASLVG
Sbjct: 662  LVQEALNHLMKGRTTLVIAHRLSTVQNAHQIALCSEGRIAELGTHFELLAKKGQYASLVG 721

Query: 723  TQRLAFE 743
            TQRLAFE
Sbjct: 722  TQRLAFE 728


>ref|XP_002280266.2| PREDICTED: ABC transporter B family member 28-like [Vitis vinifera]
            gi|297741119|emb|CBI31850.3| unnamed protein product
            [Vitis vinifera]
          Length = 717

 Score =  376 bits (965), Expect = e-102
 Identities = 196/247 (79%), Positives = 209/247 (84%)
 Frame = +3

Query: 3    GDICLEDVHFSYPLRPDVKVLSGLNLTLKCGTVTALVGSSGAGKSTIVQLLARFYEPTRG 182
            GD+CLEDVHFSYPLRPDV++L+GLNL LKCGTVTALVGSSGAGKSTIVQLLARFYEP+RG
Sbjct: 471  GDVCLEDVHFSYPLRPDVEILNGLNLRLKCGTVTALVGSSGAGKSTIVQLLARFYEPSRG 530

Query: 183  RITVSGEDVRTFDKSEWARVVSIVNQEPVLFSASVGENIAYGLPDDNVSXXXXXXXXXXX 362
             ITVSGEDVRTFDKSEWARVVSIVNQEPVLFS SVGENIAYGLPD+NVS           
Sbjct: 531  CITVSGEDVRTFDKSEWARVVSIVNQEPVLFSVSVGENIAYGLPDNNVSKDDVIKAAKAA 590

Query: 363  XXHEFIISLPQGYDTXXXXXXXXXXXXXXXXXAIARALLKNAPILILDEATSALDAVSER 542
              H+FIISLPQGYDT                 AIARALLKNAPILILDEATSALDA+SER
Sbjct: 591  NAHDFIISLPQGYDTLVGERGGLLSGGQRQRIAIARALLKNAPILILDEATSALDAISER 650

Query: 543  LVQDALNQLMKGRTTLVIAHRLSTVQNAHQIALCSDGKIEELGTHSELLARKGQYASLVG 722
            LVQDAL+ LMKGRTTLVIAH+LSTVQNA QIALCS G+I ELG+H ELLA+KGQYASLVG
Sbjct: 651  LVQDALSHLMKGRTTLVIAHKLSTVQNADQIALCSSGRIAELGSHFELLAKKGQYASLVG 710

Query: 723  TQRLAFE 743
            TQRLAFE
Sbjct: 711  TQRLAFE 717


>ref|XP_002321879.1| predicted protein [Populus trichocarpa] gi|222868875|gb|EEF06006.1|
           predicted protein [Populus trichocarpa]
          Length = 255

 Score =  374 bits (960), Expect = e-101
 Identities = 196/245 (80%), Positives = 206/245 (84%)
 Frame = +3

Query: 9   ICLEDVHFSYPLRPDVKVLSGLNLTLKCGTVTALVGSSGAGKSTIVQLLARFYEPTRGRI 188
           IC  DVHFSYPLRPDV++L+GLNLTLKCGTVTALVGSSG+GKSTIVQLLARFYEPTRGRI
Sbjct: 11  ICYADVHFSYPLRPDVEILNGLNLTLKCGTVTALVGSSGSGKSTIVQLLARFYEPTRGRI 70

Query: 189 TVSGEDVRTFDKSEWARVVSIVNQEPVLFSASVGENIAYGLPDDNVSXXXXXXXXXXXXX 368
           TVSGEDVRTF+K+EW   VSIVNQEPVLFS SVGENIAYGLPDDNVS             
Sbjct: 71  TVSGEDVRTFEKTEWVEAVSIVNQEPVLFSVSVGENIAYGLPDDNVSKDDIIKAAKAANA 130

Query: 369 HEFIISLPQGYDTXXXXXXXXXXXXXXXXXAIARALLKNAPILILDEATSALDAVSERLV 548
           HEFIISLPQGYDT                 AIARALLKNAPILILDEATSALDAVSERLV
Sbjct: 131 HEFIISLPQGYDTLVGERGGLLSGGQRQRIAIARALLKNAPILILDEATSALDAVSERLV 190

Query: 549 QDALNQLMKGRTTLVIAHRLSTVQNAHQIALCSDGKIEELGTHSELLARKGQYASLVGTQ 728
           QDAL+QLMKGRTTLVIAHRLSTVQNA+QIALCS G+I ELGTHSELL +KGQYASLVGTQ
Sbjct: 191 QDALDQLMKGRTTLVIAHRLSTVQNANQIALCSGGRIAELGTHSELLDKKGQYASLVGTQ 250

Query: 729 RLAFE 743
           RLAFE
Sbjct: 251 RLAFE 255


>ref|XP_002510849.1| ATNAP8, putative [Ricinus communis] gi|223549964|gb|EEF51451.1|
            ATNAP8, putative [Ricinus communis]
          Length = 712

 Score =  373 bits (958), Expect = e-101
 Identities = 197/247 (79%), Positives = 209/247 (84%)
 Frame = +3

Query: 3    GDICLEDVHFSYPLRPDVKVLSGLNLTLKCGTVTALVGSSGAGKSTIVQLLARFYEPTRG 182
            GD+ LEDVHFSYPLRPDV++L+GLNL LK GTVTALVGSSGAGKSTIVQLLARFYEPTRG
Sbjct: 466  GDVNLEDVHFSYPLRPDVEILNGLNLKLKRGTVTALVGSSGAGKSTIVQLLARFYEPTRG 525

Query: 183  RITVSGEDVRTFDKSEWARVVSIVNQEPVLFSASVGENIAYGLPDDNVSXXXXXXXXXXX 362
            +ITV+GEDVRTF+K+EWARVVSIVNQEPVLFS SVGENIAYGLPDDNVS           
Sbjct: 526  QITVAGEDVRTFEKTEWARVVSIVNQEPVLFSVSVGENIAYGLPDDNVSKDDIIKAAKAA 585

Query: 363  XXHEFIISLPQGYDTXXXXXXXXXXXXXXXXXAIARALLKNAPILILDEATSALDAVSER 542
              HEFIISLP+GY T                 AIARALLKNAPILILDEATSALDAVSER
Sbjct: 586  NAHEFIISLPKGYATSVGERGGLLSGGQRQRIAIARALLKNAPILILDEATSALDAVSER 645

Query: 543  LVQDALNQLMKGRTTLVIAHRLSTVQNAHQIALCSDGKIEELGTHSELLARKGQYASLVG 722
            LVQDAL+ LMKGRTTLVIAHRLSTVQNAHQIALCSDG+I ELGTH ELLA+KGQYASLVG
Sbjct: 646  LVQDALDHLMKGRTTLVIAHRLSTVQNAHQIALCSDGRIAELGTHFELLAKKGQYASLVG 705

Query: 723  TQRLAFE 743
            TQRLAFE
Sbjct: 706  TQRLAFE 712


>ref|XP_004143641.1| PREDICTED: ABC transporter B family member 28-like [Cucumis sativus]
          Length = 710

 Score =  371 bits (952), Expect = e-100
 Identities = 194/247 (78%), Positives = 204/247 (82%)
 Frame = +3

Query: 3    GDICLEDVHFSYPLRPDVKVLSGLNLTLKCGTVTALVGSSGAGKSTIVQLLARFYEPTRG 182
            GDICLEDV FSYPLRPDV VLSGLNLTLKCGT+TALVG+SGAGKSTIVQLLARFYEP +G
Sbjct: 464  GDICLEDVCFSYPLRPDVNVLSGLNLTLKCGTITALVGASGAGKSTIVQLLARFYEPKQG 523

Query: 183  RITVSGEDVRTFDKSEWARVVSIVNQEPVLFSASVGENIAYGLPDDNVSXXXXXXXXXXX 362
            +I VSGED+R FDK EWAR VSIVNQEPVLFS SVGENIAYGLPDDNV+           
Sbjct: 524  QIKVSGEDIRAFDKREWARAVSIVNQEPVLFSVSVGENIAYGLPDDNVTKDEVIKAAKAA 583

Query: 363  XXHEFIISLPQGYDTXXXXXXXXXXXXXXXXXAIARALLKNAPILILDEATSALDAVSER 542
              H+FIISLPQGYDT                 AIARALLKN+PILILDEATSALDAVSER
Sbjct: 584  NAHDFIISLPQGYDTPVGERGGLLSGGQRQRIAIARALLKNSPILILDEATSALDAVSER 643

Query: 543  LVQDALNQLMKGRTTLVIAHRLSTVQNAHQIALCSDGKIEELGTHSELLARKGQYASLVG 722
            LVQDALN LMKGRTTLVIAHRLSTVQNAHQIA C+DGKI ELGTH ELLA+KGQYASLV 
Sbjct: 644  LVQDALNHLMKGRTTLVIAHRLSTVQNAHQIAFCADGKIVELGTHLELLAQKGQYASLVS 703

Query: 723  TQRLAFE 743
            TQRLAFE
Sbjct: 704  TQRLAFE 710


Top