BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023811
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326162.1| predicted protein [Populus trichocarpa] gi|2...    68   8e-11
ref|XP_002334200.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-11
dbj|BAC42187.2| unknown protein [Arabidopsis thaliana]                 66   3e-09
ref|NP_195903.2| pentatricopeptide repeat-containing protein [Ar...    66   3e-09
emb|CAB86037.1| putative protein [Arabidopsis thaliana]                66   3e-09

>ref|XP_002326162.1| predicted protein [Populus trichocarpa] gi|222833355|gb|EEE71832.1|
           predicted protein [Populus trichocarpa]
          Length = 828

 Score = 67.8 bits (164), Expect(2) = 8e-11
 Identities = 42/95 (44%), Positives = 61/95 (64%), Gaps = 7/95 (7%)
 Frame = +3

Query: 159 PPLLKN--FRQ-----SPLKYYADLASNLAEDGRLEEFVMIAESLLVYNNNDSSLLFVAS 317
           PPLL    FRQ     S L Y+A+LAS LAEDGRL++FVMIAES++      SS  FVA+
Sbjct: 53  PPLLSTIPFRQNHNSSSLLDYHANLASKLAEDGRLQDFVMIAESVIASGVEPSS--FVAA 110

Query: 318 LNVKLVSVGVTNLICDGRLDSVLEWFSRVDTLGIA 422
           L+V  V+ G++  +  G +D V+ +  + + LG++
Sbjct: 111 LSVGPVAKGISKNLQQGNVDCVVRFLKKTEELGVS 145



 Score = 23.5 bits (49), Expect(2) = 8e-11
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +1

Query: 91  PTQPNTPNSNHHTRLKNPPRHSTLH 165
           PT P++   +HH   K  P+  +LH
Sbjct: 15  PTNPSSTPHHHHHSPKPKPKTPSLH 39


>ref|XP_002334200.1| predicted protein [Populus trichocarpa] gi|222870081|gb|EEF07212.1|
           predicted protein [Populus trichocarpa]
          Length = 317

 Score = 67.8 bits (164), Expect(2) = 9e-11
 Identities = 42/95 (44%), Positives = 61/95 (64%), Gaps = 7/95 (7%)
 Frame = +3

Query: 159 PPLLKN--FRQ-----SPLKYYADLASNLAEDGRLEEFVMIAESLLVYNNNDSSLLFVAS 317
           PPLL    FRQ     S L Y+A+LAS LAEDGRL++FVMIAES++      SS  FVA+
Sbjct: 53  PPLLSTIPFRQNHNSSSLLDYHANLASKLAEDGRLQDFVMIAESVIASGVEPSS--FVAA 110

Query: 318 LNVKLVSVGVTNLICDGRLDSVLEWFSRVDTLGIA 422
           L+V  V+ G++  +  G +D V+ +  + + LG++
Sbjct: 111 LSVGPVAKGISKNLQQGNVDCVVRFLKKTEELGVS 145



 Score = 23.5 bits (49), Expect(2) = 9e-11
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +1

Query: 91  PTQPNTPNSNHHTRLKNPPRHSTLH 165
           PT P++   +HH   K  P+  +LH
Sbjct: 15  PTNPSSTPHHHHHSPKPKPKTPSLH 39


>dbj|BAC42187.2| unknown protein [Arabidopsis thaliana]
          Length = 852

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 40/119 (33%), Positives = 68/119 (57%), Gaps = 1/119 (0%)
 Frame = +3

Query: 81  KLSPNTTK-HSQLKPSYSTKKSATSFHPPLLKNFRQSPLKYYADLASNLAEDGRLEEFVM 257
           KL P+  + HS    S S   S +S    +++      L+YYAD AS LAEDGR+E+  +
Sbjct: 43  KLLPSLPQQHSPSPASVSATHSLSSHFSNVVRWIPDGSLEYYADFASKLAEDGRIEDVAL 102

Query: 258 IAESLLVYNNNDSSLLFVASLNVKLVSVGVTNLICDGRLDSVLEWFSRVDTLGIAPKGL 434
           IAE+L    +  +   F + ++  L+S G+++ +  G+++SV+    R++ +GIAP  L
Sbjct: 103 IAETLAA-ESGANVARFASMVDYDLLSKGISSNLRQGKIESVVYTLKRIEKVGIAPLDL 160


>ref|NP_195903.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|332278227|sp|Q8GYL7.3|PP361_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g02830, chloroplastic; Flags: Precursor
           gi|332003140|gb|AED90523.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 852

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 40/119 (33%), Positives = 68/119 (57%), Gaps = 1/119 (0%)
 Frame = +3

Query: 81  KLSPNTTK-HSQLKPSYSTKKSATSFHPPLLKNFRQSPLKYYADLASNLAEDGRLEEFVM 257
           KL P+  + HS    S S   S +S    +++      L+YYAD AS LAEDGR+E+  +
Sbjct: 43  KLLPSLPQQHSPSPASVSATHSLSSHFSNVVRWIPDGSLEYYADFASKLAEDGRIEDVAL 102

Query: 258 IAESLLVYNNNDSSLLFVASLNVKLVSVGVTNLICDGRLDSVLEWFSRVDTLGIAPKGL 434
           IAE+L    +  +   F + ++  L+S G+++ +  G+++SV+    R++ +GIAP  L
Sbjct: 103 IAETLAA-ESGANVARFASMVDYDLLSKGISSNLRQGKIESVVYTLKRIEKVGIAPLDL 160


>emb|CAB86037.1| putative protein [Arabidopsis thaliana]
          Length = 798

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 40/119 (33%), Positives = 68/119 (57%), Gaps = 1/119 (0%)
 Frame = +3

Query: 81  KLSPNTTK-HSQLKPSYSTKKSATSFHPPLLKNFRQSPLKYYADLASNLAEDGRLEEFVM 257
           KL P+  + HS    S S   S +S    +++      L+YYAD AS LAEDGR+E+  +
Sbjct: 43  KLLPSLPQQHSPSPASVSATHSLSSHFSNVVRWIPDGSLEYYADFASKLAEDGRIEDVAL 102

Query: 258 IAESLLVYNNNDSSLLFVASLNVKLVSVGVTNLICDGRLDSVLEWFSRVDTLGIAPKGL 434
           IAE+L    +  +   F + ++  L+S G+++ +  G+++SV+    R++ +GIAP  L
Sbjct: 103 IAETLAA-ESGANVARFASMVDYDLLSKGISSNLRQGKIESVVYTLKRIEKVGIAPLDL 160