BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023789
         (1475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28140.3| unnamed protein product [Vitis vinifera]              347   5e-93
ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containi...   342   2e-91
emb|CBI30729.3| unnamed protein product [Vitis vinifera]              340   6e-91
ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containi...   339   1e-90
emb|CBI31119.3| unnamed protein product [Vitis vinifera]              339   1e-90

>emb|CBI28140.3| unnamed protein product [Vitis vinifera]
          Length = 580

 Score =  347 bits (890), Expect = 5e-93
 Identities = 189/461 (40%), Positives = 266/461 (57%), Gaps = 8/461 (1%)
 Frame = +1

Query: 115  NQI---STFTWNSLFRTTS----PHHALPLYTKMLQSNSHPNKFTFTFLLKACSKISKPH 273
            NQI   +TFT NS+ R  +    P  A+  Y  M+     P++FTF  L K+C  + +  
Sbjct: 36   NQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGVLCE-- 93

Query: 274  FGIHLHCHLIKFGFGSDAFLLTSLIGTYADAGLVKISQKLFDIMSNRDVVTWTALVSAYA 453
             G  LHCH  K GF SDA++  +L+  Y++ G +  ++K+FD M N+ VV+W  ++ AYA
Sbjct: 94   -GKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYA 152

Query: 454  KCGMPDEARCVFYKMP-ERNAVSWAAVVSGYSQCGRHDEALSLFNETCRENVVPTEGMXX 630
            +  +P EA  +F +M    N   W  +++G+ +   ++EALSLFNE     V   +    
Sbjct: 153  QWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMA 212

Query: 631  XXXXXXXXXXXXXXXKWVHDYVKCNGILLTASIGTALLSMYAKCGCIDDAICVFMEMPRR 810
                           KW+H Y++   I +  ++GTAL+ MYAKCG I+ A+ VF EMP +
Sbjct: 213  SLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEK 272

Query: 811  DALSWTAMISALSMHGKGQQALACFDEMLSLGLRPDHVTFVGVLSACSHAGFVEEGLYYF 990
            D ++WTA+I  L+M G+G +AL  F EM    ++PD +TFVGVL+ACSHAG V EG+ YF
Sbjct: 273  DVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYF 332

Query: 991  RCMEEVYKIAPGLEHYGCMVDVLGRGGHVEEAWDLVRNMPMKPDAFVLKSLLSGCASYGY 1170
              M   Y I P +EHYGCMVD+LGR G + EA DL++NMPM PD FVL  LLS C  +G 
Sbjct: 333  NSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGN 392

Query: 1171 LDCAEWAAMKLLELDQDSDSPYTLLGNAYASVGRWADAEXXXXXXXXXXXXXTPGCSLVE 1350
            L  AE AA +L+ELD  +   Y LL N Y+S+  W  A+              PGCS +E
Sbjct: 393  LVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCSAIE 452

Query: 1351 IDGVVHQFVAGNNEEHPKMEEIKSLLHEMGKNLGLADHTCD 1473
            + GVVH+FV G +  HP+  EI   L +M + L  A +  D
Sbjct: 453  VGGVVHEFVKG-DVSHPQSSEIYETLDDMMRRLKSAGYVPD 492


>ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like
            [Vitis vinifera]
          Length = 624

 Score =  342 bits (876), Expect = 2e-91
 Identities = 175/440 (39%), Positives = 261/440 (59%), Gaps = 4/440 (0%)
 Frame = +1

Query: 130  FTWNSLFRT----TSPHHALPLYTKMLQSNSHPNKFTFTFLLKACSKISKPHFGIHLHCH 297
            + +N++FR         + + +Y++ML  +  PNKFT+  L++AC        G  +H H
Sbjct: 86   YIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAH 145

Query: 298  LIKFGFGSDAFLLTSLIGTYADAGLVKISQKLFDIMSNRDVVTWTALVSAYAKCGMPDEA 477
            ++KFGFG+D F L +LI  Y +   ++ ++++FD M  RDVV+WT+L++ Y++ G  D+A
Sbjct: 146  VLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQWGFVDKA 205

Query: 478  RCVFYKMPERNAVSWAAVVSGYSQCGRHDEALSLFNETCRENVVPTEGMXXXXXXXXXXX 657
            R VF  MPERN+VSW A+++ Y Q  R  EA +LF+    ENVV  + +           
Sbjct: 206  REVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGL 265

Query: 658  XXXXXXKWVHDYVKCNGILLTASIGTALLSMYAKCGCIDDAICVFMEMPRRDALSWTAMI 837
                  KW+H Y++ +GI L + + T ++ MY KCGC++ A  VF E+P++   SW  MI
Sbjct: 266  GALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMI 325

Query: 838  SALSMHGKGQQALACFDEMLSLGLRPDHVTFVGVLSACSHAGFVEEGLYYFRCMEEVYKI 1017
              L+MHGKG+ A+  F EM    + PD +TFV VLSAC+H+G VEEG +YF+ M EV  +
Sbjct: 326  GGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGL 385

Query: 1018 APGLEHYGCMVDVLGRGGHVEEAWDLVRNMPMKPDAFVLKSLLSGCASYGYLDCAEWAAM 1197
             PG+EH+GCMVD+LGR G +EEA  L+  MP+ PDA VL +L+  C  +G  +  E    
Sbjct: 386  KPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIGK 445

Query: 1198 KLLELDQDSDSPYTLLGNAYASVGRWADAEXXXXXXXXXXXXXTPGCSLVEIDGVVHQFV 1377
            K++EL+  +   Y LL N YAS GRW D                PG S++E +  V +F+
Sbjct: 446  KVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIESESGVDEFI 505

Query: 1378 AGNNEEHPKMEEIKSLLHEM 1437
            AG    HP+ +EI + L E+
Sbjct: 506  AG-GRAHPQAKEIYAKLDEI 524


>emb|CBI30729.3| unnamed protein product [Vitis vinifera]
          Length = 506

 Score =  340 bits (872), Expect = 6e-91
 Identities = 181/432 (41%), Positives = 253/432 (58%), Gaps = 5/432 (1%)
 Frame = +1

Query: 103  TNFPNQISTFTWNSLFR----TTSPHHALPLYTKMLQSNSHPNKFTFTFLLKACSKISKP 270
            +  PN  +++ WN++ R    + +P  AL ++ +ML ++  P+K+TFTF LK+C   S  
Sbjct: 66   SRIPNP-NSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGSFSGV 124

Query: 271  HFGIHLHCHLIKFGFGSDAFLLTSLIGTYADAGLVKISQKLFDIMSNRDVVTWTALVSAY 450
              G  +H H++K G G D F+  +LI  YA  G ++ ++ L D M  RDVV+W AL+SAY
Sbjct: 125  EEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNALLSAY 184

Query: 451  AKCGMPDEA-RCVFYKMPERNAVSWAAVVSGYSQCGRHDEALSLFNETCRENVVPTEGMX 627
            A+ G+ + A R VF + P +N VSW A+++GYS  GR  E L LF +     V P     
Sbjct: 185  AERGLMELASRRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTL 244

Query: 628  XXXXXXXXXXXXXXXXKWVHDYVKCNGILLTASIGTALLSMYAKCGCIDDAICVFMEMPR 807
                            +WVH Y+  NGI +   + TAL+ MY+KCG I+ A+ VF    R
Sbjct: 245  VSVLSACAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSCLR 304

Query: 808  RDALSWTAMISALSMHGKGQQALACFDEMLSLGLRPDHVTFVGVLSACSHAGFVEEGLYY 987
            +D  +W ++IS LS HG GQ AL  F EML  G +P+ VTFV VLSACS AG ++EG   
Sbjct: 305  KDISTWNSIISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLLDEGREM 364

Query: 988  FRCMEEVYKIAPGLEHYGCMVDVLGRGGHVEEAWDLVRNMPMKPDAFVLKSLLSGCASYG 1167
            F  M  V+ I P +EHYGCMVD+LGR G +EEA +LV+ MP K  + V +SLL  C ++G
Sbjct: 365  FNLMVHVHGIQPTIEHYGCMVDLLGRVGLLEEAEELVQKMPQKEASVVWESLLGACRNHG 424

Query: 1168 YLDCAEWAAMKLLELDQDSDSPYTLLGNAYASVGRWADAEXXXXXXXXXXXXXTPGCSLV 1347
             ++ AE  A KLLEL     S +  L N YAS+GRW D                PGCS++
Sbjct: 425  NVELAERVAQKLLELSPQESSSFVQLSNMYASMGRWKDVMEVRQKMRAQGVRKDPGCSMI 484

Query: 1348 EIDGVVHQFVAG 1383
            E+DG V++F+AG
Sbjct: 485  EVDGTVYEFLAG 496


>ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like
            [Vitis vinifera]
          Length = 537

 Score =  339 bits (870), Expect = 1e-90
 Identities = 180/446 (40%), Positives = 261/446 (58%), Gaps = 4/446 (0%)
 Frame = +1

Query: 124  STFTWNSLFRTTS----PHHALPLYTKMLQSNSHPNKFTFTFLLKACSKISKPHFGIHLH 291
            ++F WN++ R  +    P   L LY  ML +   PN +TF+FLL+AC+++S   FGI LH
Sbjct: 77   TSFIWNTMLRAFTDKKEPATVLSLYKYMLSTGFLPNNYTFSFLLQACAQLSDLSFGILLH 136

Query: 292  CHLIKFGFGSDAFLLTSLIGTYADAGLVKISQKLFDIMSNRDVVTWTALVSAYAKCGMPD 471
               ++ G+ +  F+   L+  YA    +  +++LFD   NRDVVTWTA+++ YAK G   
Sbjct: 137  AQAVRLGWEAYDFVQNGLLHLYASCNCMDSARRLFDGSVNRDVVTWTAVINGYAKSGQVV 196

Query: 472  EARCVFYKMPERNAVSWAAVVSGYSQCGRHDEALSLFNETCRENVVPTEGMXXXXXXXXX 651
             AR +F +MPE+NAVSW+A+++GY+Q G   EAL LFN+       P  G          
Sbjct: 197  VARQLFDEMPEKNAVSWSAMITGYAQIGLFREALELFNDMQIAGFRPNHGAIVGALTACA 256

Query: 652  XXXXXXXXKWVHDYVKCNGILLTASIGTALLSMYAKCGCIDDAICVFMEMPRRDALSWTA 831
                    +W+H YV  N ++L   +GTAL+ MYAKCGC++ A  VF EM  RD  ++T+
Sbjct: 257  FLGALDQGRWIHAYVDRNRMVLDRILGTALIDMYAKCGCVETACRVFDEMLDRDVFAFTS 316

Query: 832  MISALSMHGKGQQALACFDEMLSLGLRPDHVTFVGVLSACSHAGFVEEGLYYFRCMEEVY 1011
            +IS L+ HG    A+  F  M + G+ P+ VTF+ +LSACS  G VEEGL  F+ M  +Y
Sbjct: 317  LISGLANHGHSATAIEMFTRMQNEGVCPNEVTFICLLSACSRVGLVEEGLRIFKSMTNIY 376

Query: 1012 KIAPGLEHYGCMVDVLGRGGHVEEAWDLVRNMPMKPDAFVLKSLLSGCASYGYLDCAEWA 1191
             I P ++HYGC+VD+LGR G +E+A  +VR MP++PD++VL +LL+ C  +G ++  +  
Sbjct: 377  GIEPVVQHYGCLVDLLGRAGMLEDAKRVVREMPLEPDSYVLGALLNACRVHGDVELGKET 436

Query: 1192 AMKLLELDQDSDSPYTLLGNAYASVGRWADAEXXXXXXXXXXXXXTPGCSLVEIDGVVHQ 1371
               L E   D    + LL N YAS  +W D                PGCSL+E+DG V +
Sbjct: 437  VECLAERSLDHGGVHVLLSNMYASANQWEDVAKVRKGMEEKKVKKVPGCSLIEVDGAVFE 496

Query: 1372 FVAGNNEEHPKMEEIKSLLHEMGKNL 1449
            FVAG +  H  M+EI  LL  + K+L
Sbjct: 497  FVAG-DMSHVFMDEIVLLLLGIDKHL 521


>emb|CBI31119.3| unnamed protein product [Vitis vinifera]
          Length = 512

 Score =  339 bits (870), Expect = 1e-90
 Identities = 180/446 (40%), Positives = 261/446 (58%), Gaps = 4/446 (0%)
 Frame = +1

Query: 124  STFTWNSLFRTTS----PHHALPLYTKMLQSNSHPNKFTFTFLLKACSKISKPHFGIHLH 291
            ++F WN++ R  +    P   L LY  ML +   PN +TF+FLL+AC+++S   FGI LH
Sbjct: 52   TSFIWNTMLRAFTDKKEPATVLSLYKYMLSTGFLPNNYTFSFLLQACAQLSDLSFGILLH 111

Query: 292  CHLIKFGFGSDAFLLTSLIGTYADAGLVKISQKLFDIMSNRDVVTWTALVSAYAKCGMPD 471
               ++ G+ +  F+   L+  YA    +  +++LFD   NRDVVTWTA+++ YAK G   
Sbjct: 112  AQAVRLGWEAYDFVQNGLLHLYASCNCMDSARRLFDGSVNRDVVTWTAVINGYAKSGQVV 171

Query: 472  EARCVFYKMPERNAVSWAAVVSGYSQCGRHDEALSLFNETCRENVVPTEGMXXXXXXXXX 651
             AR +F +MPE+NAVSW+A+++GY+Q G   EAL LFN+       P  G          
Sbjct: 172  VARQLFDEMPEKNAVSWSAMITGYAQIGLFREALELFNDMQIAGFRPNHGAIVGALTACA 231

Query: 652  XXXXXXXXKWVHDYVKCNGILLTASIGTALLSMYAKCGCIDDAICVFMEMPRRDALSWTA 831
                    +W+H YV  N ++L   +GTAL+ MYAKCGC++ A  VF EM  RD  ++T+
Sbjct: 232  FLGALDQGRWIHAYVDRNRMVLDRILGTALIDMYAKCGCVETACRVFDEMLDRDVFAFTS 291

Query: 832  MISALSMHGKGQQALACFDEMLSLGLRPDHVTFVGVLSACSHAGFVEEGLYYFRCMEEVY 1011
            +IS L+ HG    A+  F  M + G+ P+ VTF+ +LSACS  G VEEGL  F+ M  +Y
Sbjct: 292  LISGLANHGHSATAIEMFTRMQNEGVCPNEVTFICLLSACSRVGLVEEGLRIFKSMTNIY 351

Query: 1012 KIAPGLEHYGCMVDVLGRGGHVEEAWDLVRNMPMKPDAFVLKSLLSGCASYGYLDCAEWA 1191
             I P ++HYGC+VD+LGR G +E+A  +VR MP++PD++VL +LL+ C  +G ++  +  
Sbjct: 352  GIEPVVQHYGCLVDLLGRAGMLEDAKRVVREMPLEPDSYVLGALLNACRVHGDVELGKET 411

Query: 1192 AMKLLELDQDSDSPYTLLGNAYASVGRWADAEXXXXXXXXXXXXXTPGCSLVEIDGVVHQ 1371
               L E   D    + LL N YAS  +W D                PGCSL+E+DG V +
Sbjct: 412  VECLAERSLDHGGVHVLLSNMYASANQWEDVAKVRKGMEEKKVKKVPGCSLIEVDGAVFE 471

Query: 1372 FVAGNNEEHPKMEEIKSLLHEMGKNL 1449
            FVAG +  H  M+EI  LL  + K+L
Sbjct: 472  FVAG-DMSHVFMDEIVLLLLGIDKHL 496