BLASTX nr result

ID: Coptis23_contig00023774 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023774
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318120.1| predicted protein [Populus trichocarpa] gi|2...   122   4e-26
ref|XP_003528793.1| PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Dol al...   120   9e-26
emb|CAN79918.1| hypothetical protein VITISV_005430 [Vitis vinifera]   119   3e-25
ref|XP_004148200.1| PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Dol al...   117   1e-24
ref|XP_002271550.1| PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Dol al...   117   1e-24

>ref|XP_002318120.1| predicted protein [Populus trichocarpa] gi|222858793|gb|EEE96340.1|
           predicted protein [Populus trichocarpa]
          Length = 466

 Score =  122 bits (305), Expect = 4e-26
 Identities = 54/76 (71%), Positives = 68/76 (89%)
 Frame = -3

Query: 230 ETLMVRAIYRFGVKILQPPQVFHLYRRKWVEERTYPRFTMVGQSFGSVHLA*EALCKYTL 51
           E+LM RA+ RFGV++L PP+V HLY+RKW+EE +YPRFTM+GQSFGSV+L+ EALCK+T 
Sbjct: 84  ESLMSRALDRFGVQLLTPPKVVHLYKRKWIEETSYPRFTMIGQSFGSVYLSWEALCKFTP 143

Query: 50  SFYFDTSGYAFTYPLA 3
            +YFDTSGYAFTYP+A
Sbjct: 144 LYYFDTSGYAFTYPVA 159


>ref|XP_003528793.1| PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Dol
           alpha-1,2-mannosyltransferase-like [Glycine max]
          Length = 456

 Score =  120 bits (302), Expect = 9e-26
 Identities = 54/76 (71%), Positives = 65/76 (85%)
 Frame = -3

Query: 230 ETLMVRAIYRFGVKILQPPQVFHLYRRKWVEERTYPRFTMVGQSFGSVHLA*EALCKYTL 51
           ++LM RA+ RFGV +L PP+V HLY+RKW+EE TYP FTM+GQS GSV+LA EALCK+T 
Sbjct: 74  QSLMARALDRFGVALLSPPKVVHLYKRKWIEETTYPHFTMIGQSLGSVYLAWEALCKFTP 133

Query: 50  SFYFDTSGYAFTYPLA 3
            +YFDTSGYAFTYPLA
Sbjct: 134 IYYFDTSGYAFTYPLA 149


>emb|CAN79918.1| hypothetical protein VITISV_005430 [Vitis vinifera]
          Length = 717

 Score =  119 bits (297), Expect = 3e-25
 Identities = 52/76 (68%), Positives = 65/76 (85%)
 Frame = -3

Query: 230 ETLMVRAIYRFGVKILQPPQVFHLYRRKWVEERTYPRFTMVGQSFGSVHLA*EALCKYTL 51
           ++LM RA+ RFGV++L PP+V HLY+RKW+EE  YPRFTM+GQS GSV+L+ EALCKYT 
Sbjct: 82  DSLMARAVQRFGVELLYPPKVVHLYKRKWIEETMYPRFTMIGQSLGSVYLSWEALCKYTP 141

Query: 50  SFYFDTSGYAFTYPLA 3
            +Y DTSGYAFTYP+A
Sbjct: 142 LYYIDTSGYAFTYPVA 157


>ref|XP_004148200.1| PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Dol
           alpha-1,2-mannosyltransferase-like [Cucumis sativus]
           gi|449507809|ref|XP_004163134.1| PREDICTED:
           GDP-Man:Man(3)GlcNAc(2)-PP-Dol
           alpha-1,2-mannosyltransferase-like [Cucumis sativus]
          Length = 463

 Score =  117 bits (293), Expect = 1e-24
 Identities = 51/76 (67%), Positives = 66/76 (86%)
 Frame = -3

Query: 230 ETLMVRAIYRFGVKILQPPQVFHLYRRKWVEERTYPRFTMVGQSFGSVHLA*EALCKYTL 51
           E+LM RA+ RFGVK+  PP+V HL++RKW+EE TYPRFTM+GQS GS++L+ EALC++T 
Sbjct: 81  ESLMARAVDRFGVKLHFPPKVVHLHKRKWIEETTYPRFTMIGQSLGSIYLSWEALCRFTP 140

Query: 50  SFYFDTSGYAFTYPLA 3
            +YFDTSGYAFTYP+A
Sbjct: 141 LYYFDTSGYAFTYPIA 156


>ref|XP_002271550.1| PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Dol
           alpha-1,2-mannosyltransferase [Vitis vinifera]
           gi|297736585|emb|CBI25456.3| unnamed protein product
           [Vitis vinifera]
          Length = 463

 Score =  117 bits (292), Expect = 1e-24
 Identities = 51/76 (67%), Positives = 64/76 (84%)
 Frame = -3

Query: 230 ETLMVRAIYRFGVKILQPPQVFHLYRRKWVEERTYPRFTMVGQSFGSVHLA*EALCKYTL 51
           ++LM RA+ RFGV++L PP+V HLY+RKW+EE  YPRFTM+GQS GSV+L+ EALCKYT 
Sbjct: 82  DSLMARAVQRFGVELLYPPKVVHLYKRKWIEETMYPRFTMIGQSLGSVYLSWEALCKYTP 141

Query: 50  SFYFDTSGYAFTYPLA 3
            +Y DTSGYAF YP+A
Sbjct: 142 LYYIDTSGYAFAYPVA 157


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