BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023760
         (501 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635109.1| PREDICTED: pentatricopeptide repeat-containi...    66   3e-09
emb|CBI23347.3| unnamed protein product [Vitis vinifera]               66   3e-09
ref|XP_002332091.1| predicted protein [Populus trichocarpa] gi|2...    65   4e-09
ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    61   8e-08
ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containi...    61   8e-08

>ref|XP_003635109.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g24830-like [Vitis vinifera]
          Length = 580

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 28/51 (54%), Positives = 38/51 (74%)
 Frame = +1

Query: 1   IRVHCMRGNIMEATELLGKIHRSGAGVDHVPYQIIIKKYCNMRDPKKAFGL 153
           IR  C+RG++MEA ELL K+ RSG  +DH P+QI+I+KYC  R P +A+ L
Sbjct: 526 IRGFCIRGHVMEAEELLAKLQRSGLSIDHAPFQILIQKYCRTRVPGRAYDL 576


>emb|CBI23347.3| unnamed protein product [Vitis vinifera]
          Length = 451

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 28/51 (54%), Positives = 38/51 (74%)
 Frame = +1

Query: 1   IRVHCMRGNIMEATELLGKIHRSGAGVDHVPYQIIIKKYCNMRDPKKAFGL 153
           IR  C+RG++MEA ELL K+ RSG  +DH P+QI+I+KYC  R P +A+ L
Sbjct: 378 IRGFCIRGHVMEAEELLAKLQRSGLSIDHAPFQILIQKYCRTRVPGRAYDL 428


>ref|XP_002332091.1| predicted protein [Populus trichocarpa] gi|222874911|gb|EEF12042.1|
           predicted protein [Populus trichocarpa]
          Length = 521

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 28/54 (51%), Positives = 41/54 (75%)
 Frame = +1

Query: 1   IRVHCMRGNIMEATELLGKIHRSGAGVDHVPYQIIIKKYCNMRDPKKAFGLYEE 162
           IR +C++ N  EA ELL K+ +SG  +DHVP+QI+IK+YC M++P +AF LY +
Sbjct: 445 IRGYCVKYNTKEAEELLAKLLKSGLLIDHVPFQILIKQYCKMKEPDRAFQLYRK 498


>ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g05670, mitochondrial-like [Cucumis sativus]
          Length = 748

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 32/96 (33%), Positives = 54/96 (56%)
 Frame = +1

Query: 1   IRVHCMRGNIMEATELLGKIHRSGAGVDHVPYQIIIKKYCNMRDPKKAFGLYEEMVEKGL 180
           ++ HC+R ++   T++  ++   G   D   Y I+IK +C  R+ K+A+ LY+EM+EKG 
Sbjct: 615 MKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGY 674

Query: 181 TCRFSTYYALTKELGRKGFTREAVQVCNDMDMLGLV 288
               ++Y AL K   +K    EA ++  +M   GLV
Sbjct: 675 VPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLV 710


>ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 748

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 32/96 (33%), Positives = 54/96 (56%)
 Frame = +1

Query: 1   IRVHCMRGNIMEATELLGKIHRSGAGVDHVPYQIIIKKYCNMRDPKKAFGLYEEMVEKGL 180
           ++ HC+R ++   T++  ++   G   D   Y I+IK +C  R+ K+A+ LY+EM+EKG 
Sbjct: 615 MKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGY 674

Query: 181 TCRFSTYYALTKELGRKGFTREAVQVCNDMDMLGLV 288
               ++Y AL K   +K    EA ++  +M   GLV
Sbjct: 675 VPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLV 710