BLASTX nr result

ID: Coptis23_contig00023748 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023748
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282050.1| PREDICTED: protein RER1B [Vitis vinifera] gi...   206   2e-51
ref|XP_002510410.1| rer1 protein, putative [Ricinus communis] gi...   204   8e-51
ref|XP_004152693.1| PREDICTED: protein RER1B-like [Cucumis sativ...   203   1e-50
ref|XP_002300762.1| predicted protein [Populus trichocarpa] gi|2...   202   2e-50
gb|ABK92712.1| unknown [Populus trichocarpa]                          202   2e-50

>ref|XP_002282050.1| PREDICTED: protein RER1B [Vitis vinifera]
           gi|302142515|emb|CBI19718.3| unnamed protein product
           [Vitis vinifera]
          Length = 194

 Score =  206 bits (523), Expect = 2e-51
 Identities = 94/103 (91%), Positives = 100/103 (97%)
 Frame = -1

Query: 311 VQGFYLISYALGIYLLNLLIGFMSPKVDPELEALDGAALPTKGSDEFKPFIRRLPEFKFW 132
           VQGFY++SY LGIY+LNLLIGF+SPKVDPELE LDGA+LPTKGSDEFKPFIRRLPEFKFW
Sbjct: 58  VQGFYIVSYGLGIYILNLLIGFLSPKVDPELEVLDGASLPTKGSDEFKPFIRRLPEFKFW 117

Query: 131 YSITKAFCIAFLMTFFSAFDVPVFWPILLCYWIVLFVLTMKRQ 3
           YSITKAFC+AFLMTFFS FDVPVFWPILLCYWIVLFVLTMKRQ
Sbjct: 118 YSITKAFCVAFLMTFFSVFDVPVFWPILLCYWIVLFVLTMKRQ 160


>ref|XP_002510410.1| rer1 protein, putative [Ricinus communis]
           gi|223551111|gb|EEF52597.1| rer1 protein, putative
           [Ricinus communis]
          Length = 194

 Score =  204 bits (518), Expect = 8e-51
 Identities = 92/102 (90%), Positives = 99/102 (97%)
 Frame = -1

Query: 308 QGFYLISYALGIYLLNLLIGFMSPKVDPELEALDGAALPTKGSDEFKPFIRRLPEFKFWY 129
           QGFY++SY LGIY+LNLLIGF+SPKVDPELE LDGA+LPTKGSDEFKPFIRRLPEFKFWY
Sbjct: 59  QGFYIVSYGLGIYILNLLIGFLSPKVDPELEVLDGASLPTKGSDEFKPFIRRLPEFKFWY 118

Query: 128 SITKAFCIAFLMTFFSAFDVPVFWPILLCYWIVLFVLTMKRQ 3
           SITKAFC+AFLMTFFS FDVPVFWPILLCYW+VLFVLTMKRQ
Sbjct: 119 SITKAFCVAFLMTFFSVFDVPVFWPILLCYWVVLFVLTMKRQ 160


>ref|XP_004152693.1| PREDICTED: protein RER1B-like [Cucumis sativus]
           gi|449496096|ref|XP_004160038.1| PREDICTED: protein
           RER1B-like [Cucumis sativus]
          Length = 194

 Score =  203 bits (516), Expect = 1e-50
 Identities = 93/103 (90%), Positives = 100/103 (97%)
 Frame = -1

Query: 311 VQGFYLISYALGIYLLNLLIGFMSPKVDPELEALDGAALPTKGSDEFKPFIRRLPEFKFW 132
           VQGFY++SY LGIY+LNLLIGF+SPKVDPEL+ LDGA+LPTKGSDEFKPFIRRLPEFKFW
Sbjct: 58  VQGFYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFKPFIRRLPEFKFW 117

Query: 131 YSITKAFCIAFLMTFFSAFDVPVFWPILLCYWIVLFVLTMKRQ 3
           Y+ITKAFCIAFLMTFFS FDVPVFWPILLCYWIVLFVLTMKRQ
Sbjct: 118 YAITKAFCIAFLMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQ 160


>ref|XP_002300762.1| predicted protein [Populus trichocarpa] gi|222842488|gb|EEE80035.1|
           predicted protein [Populus trichocarpa]
          Length = 194

 Score =  202 bits (515), Expect = 2e-50
 Identities = 92/102 (90%), Positives = 99/102 (97%)
 Frame = -1

Query: 308 QGFYLISYALGIYLLNLLIGFMSPKVDPELEALDGAALPTKGSDEFKPFIRRLPEFKFWY 129
           QGFY++SY LGIY+LNLLIGF+SPKVDPELE LDGA+LPTKGSDEFKPFIRRLPEFKFWY
Sbjct: 59  QGFYIVSYGLGIYILNLLIGFLSPKVDPELEVLDGASLPTKGSDEFKPFIRRLPEFKFWY 118

Query: 128 SITKAFCIAFLMTFFSAFDVPVFWPILLCYWIVLFVLTMKRQ 3
           +ITKAFC+AFLMTFFS FDVPVFWPILLCYWIVLFVLTMKRQ
Sbjct: 119 AITKAFCVAFLMTFFSIFDVPVFWPILLCYWIVLFVLTMKRQ 160


>gb|ABK92712.1| unknown [Populus trichocarpa]
          Length = 157

 Score =  202 bits (515), Expect = 2e-50
 Identities = 92/102 (90%), Positives = 99/102 (97%)
 Frame = -1

Query: 308 QGFYLISYALGIYLLNLLIGFMSPKVDPELEALDGAALPTKGSDEFKPFIRRLPEFKFWY 129
           QGFY++SY LGIY+LNLLIGF+SPKVDPELE LDGA+LPTKGSDEFKPFIRRLPEFKFWY
Sbjct: 22  QGFYIVSYGLGIYILNLLIGFLSPKVDPELEVLDGASLPTKGSDEFKPFIRRLPEFKFWY 81

Query: 128 SITKAFCIAFLMTFFSAFDVPVFWPILLCYWIVLFVLTMKRQ 3
           +ITKAFC+AFLMTFFS FDVPVFWPILLCYWIVLFVLTMKRQ
Sbjct: 82  AITKAFCVAFLMTFFSIFDVPVFWPILLCYWIVLFVLTMKRQ 123


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