BLASTX nr result

ID: Coptis23_contig00023737 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023737
         (635 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303430.1| predicted protein [Populus trichocarpa] gi|1...   201   1e-49
emb|CAN75134.1| hypothetical protein VITISV_018886 [Vitis vinifera]   197   2e-48
ref|XP_002278687.1| PREDICTED: uncharacterized protein LOC100252...   196   3e-48
ref|XP_004168555.1| PREDICTED: phosphatidylinositol-glycan biosy...   174   9e-42
ref|XP_004150217.1| PREDICTED: phosphatidylinositol-glycan biosy...   174   9e-42

>ref|XP_002303430.1| predicted protein [Populus trichocarpa] gi|118488795|gb|ABK96208.1|
           unknown [Populus trichocarpa]
           gi|222840862|gb|EEE78409.1| predicted protein [Populus
           trichocarpa]
          Length = 315

 Score =  201 bits (510), Expect = 1e-49
 Identities = 100/180 (55%), Positives = 130/180 (72%)
 Frame = +1

Query: 94  DSSSDSETIVSLPCSRRYLSESYFEKHDSLTDLDFQSHLAHELPLCGCNQFQHNLNYVPR 273
           +SSS+S    S    R+Y+ ESYFEK+DSL + +FQ+ +  EL    C     NLN++ R
Sbjct: 41  ESSSNSNN--SYCGFRKYIMESYFEKYDSLLEPNFQNFIVDELLFNTCKLLPDNLNHLLR 98

Query: 274 LSDPQRDLVGEGSHRHLSSTIKLRIQRKGTLELPAHYCHAVVIERLPSGVFADPFELQHL 453
           +S P R L+GEGSHRH+SSTI+  +Q     +L AH+C  ++IERLP+GVFADPFELQHL
Sbjct: 99  VSVPWRHLIGEGSHRHISSTIRFHMQPDSMSQLRAHFCKVIIIERLPTGVFADPFELQHL 158

Query: 454 VQRGVFTDAAVFGDTNLELPSALSNRSVVEIHVEIGQNFLSVNAKELEVKVDIPLHARYP 633
           ++RGVFTD AVFGDTNLELPS LSN+S VEIH+++    L  +  ELE+  D+PLHARYP
Sbjct: 159 LKRGVFTDVAVFGDTNLELPSVLSNQSAVEIHMKVAPTSLLGHISELEISADLPLHARYP 218


>emb|CAN75134.1| hypothetical protein VITISV_018886 [Vitis vinifera]
          Length = 334

 Score =  197 bits (500), Expect = 2e-48
 Identities = 94/177 (53%), Positives = 127/177 (71%)
 Frame = +1

Query: 103 SDSETIVSLPCSRRYLSESYFEKHDSLTDLDFQSHLAHELPLCGCNQFQHNLNYVPRLSD 282
           S ++++   P   +++++SYF+K+DSL D DF   ++HEL    C     NLN V RLS 
Sbjct: 61  STNQSLNIPPYFEKHITKSYFDKYDSLLDSDFLDFISHELFPGSCELLLDNLNLVLRLSV 120

Query: 283 PQRDLVGEGSHRHLSSTIKLRIQRKGTLELPAHYCHAVVIERLPSGVFADPFELQHLVQR 462
            QR L+G+GSHRHLSS+ +  IQ +   ELP H+C A++IE+LP G+F DPFELQHL+QR
Sbjct: 121 QQRSLIGDGSHRHLSSSFRFNIQSELIAELPIHFCEAIIIEKLPYGIFXDPFELQHLLQR 180

Query: 463 GVFTDAAVFGDTNLELPSALSNRSVVEIHVEIGQNFLSVNAKELEVKVDIPLHARYP 633
           GVF DAAVFGDTNLELPS  SNRS+VE+H+++  N  S +   LE+ +D+PLH RYP
Sbjct: 181 GVFMDAAVFGDTNLELPSVHSNRSLVEVHMDVDLNTFSRHKDGLEINIDLPLHIRYP 237


>ref|XP_002278687.1| PREDICTED: uncharacterized protein LOC100252266 [Vitis vinifera]
           gi|297742059|emb|CBI33846.3| unnamed protein product
           [Vitis vinifera]
          Length = 329

 Score =  196 bits (498), Expect = 3e-48
 Identities = 94/177 (53%), Positives = 127/177 (71%)
 Frame = +1

Query: 103 SDSETIVSLPCSRRYLSESYFEKHDSLTDLDFQSHLAHELPLCGCNQFQHNLNYVPRLSD 282
           S ++++   P   +++++SYF+K+DSL D DF   ++HEL    C     NLN V RLS 
Sbjct: 56  STNQSLNIPPYFEKHITKSYFDKYDSLLDSDFLDFISHELFPGSCELLLDNLNLVLRLSV 115

Query: 283 PQRDLVGEGSHRHLSSTIKLRIQRKGTLELPAHYCHAVVIERLPSGVFADPFELQHLVQR 462
            QR L+G+GSHRHLSS+ +  IQ +   ELP H+C A++IE+LP G+FADPFELQHL+QR
Sbjct: 116 QQRSLIGDGSHRHLSSSFRFNIQSELIAELPIHFCEAIIIEKLPYGIFADPFELQHLLQR 175

Query: 463 GVFTDAAVFGDTNLELPSALSNRSVVEIHVEIGQNFLSVNAKELEVKVDIPLHARYP 633
           GVF  AAVFGDTNLELPS  SNRS+VE+H+++  N  S +   LE+ +D+PLH RYP
Sbjct: 176 GVFMGAAVFGDTNLELPSVHSNRSLVEVHMDVDLNTFSRHKDGLEINIDLPLHIRYP 232


>ref|XP_004168555.1| PREDICTED: phosphatidylinositol-glycan biosynthesis class X
           protein-like, partial [Cucumis sativus]
          Length = 250

 Score =  174 bits (442), Expect = 9e-42
 Identities = 89/164 (54%), Positives = 114/164 (69%)
 Frame = +1

Query: 142 RYLSESYFEKHDSLTDLDFQSHLAHELPLCGCNQFQHNLNYVPRLSDPQRDLVGEGSHRH 321
           R++ ESY+EKH+S  D  F   L  +LP+  C     +LN +  LS   R + G+GSHR 
Sbjct: 3   RHIMESYYEKHESFIDSLFDDFLTRDLPVNICEVLPSDLNTLLSLSIWSR-IKGDGSHRQ 61

Query: 322 LSSTIKLRIQRKGTLELPAHYCHAVVIERLPSGVFADPFELQHLVQRGVFTDAAVFGDTN 501
           LSSTIK +I+ K    +P H+C  ++IERLPSGVF DPFEL+HL+ R VF+D AVFGDTN
Sbjct: 62  LSSTIKFKIE-KSLFHVPTHHCKFIIIERLPSGVFVDPFELEHLLHRAVFSDVAVFGDTN 120

Query: 502 LELPSALSNRSVVEIHVEIGQNFLSVNAKELEVKVDIPLHARYP 633
           LELPS LSN SVVE+H +IG N LS N   ++  VD+PLH+RYP
Sbjct: 121 LELPSVLSNISVVEVHKDIGLNILSHNKNLIDFTVDLPLHSRYP 164


>ref|XP_004150217.1| PREDICTED: phosphatidylinositol-glycan biosynthesis class X
           protein-like [Cucumis sativus]
          Length = 273

 Score =  174 bits (442), Expect = 9e-42
 Identities = 89/164 (54%), Positives = 114/164 (69%)
 Frame = +1

Query: 142 RYLSESYFEKHDSLTDLDFQSHLAHELPLCGCNQFQHNLNYVPRLSDPQRDLVGEGSHRH 321
           R++ ESY+EKH+S  D  F   L  +LP+  C     +LN +  LS   R + G+GSHR 
Sbjct: 22  RHIMESYYEKHESFIDSLFDDFLTRDLPVNICEVLPSDLNTLLSLSIWSR-IKGDGSHRQ 80

Query: 322 LSSTIKLRIQRKGTLELPAHYCHAVVIERLPSGVFADPFELQHLVQRGVFTDAAVFGDTN 501
           LSSTIK +I+ K    +P H+C  ++IERLPSGVF DPFEL+HL+ R VF+D AVFGDTN
Sbjct: 81  LSSTIKFKIE-KSLFHVPTHHCKFIIIERLPSGVFVDPFELEHLLHRAVFSDVAVFGDTN 139

Query: 502 LELPSALSNRSVVEIHVEIGQNFLSVNAKELEVKVDIPLHARYP 633
           LELPS LSN SVVE+H +IG N LS N   ++  VD+PLH+RYP
Sbjct: 140 LELPSVLSNISVVEVHKDIGLNILSHNKNLIDFTVDLPLHSRYP 183


Top