BLASTX nr result
ID: Coptis23_contig00023736
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00023736 (280 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002284150.2| PREDICTED: uncharacterized protein LOC100260... 71 1e-10 emb|CBI19160.3| unnamed protein product [Vitis vinifera] 71 1e-10 ref|XP_002513919.1| conserved hypothetical protein [Ricinus comm... 69 3e-10 ref|XP_002301052.1| predicted protein [Populus trichocarpa] gi|2... 67 2e-09 gb|AAF79276.1|AC023279_25 F12K21.3 [Arabidopsis thaliana] 60 2e-07 >ref|XP_002284150.2| PREDICTED: uncharacterized protein LOC100260863 [Vitis vinifera] Length = 483 Score = 70.9 bits (172), Expect = 1e-10 Identities = 33/61 (54%), Positives = 46/61 (75%), Gaps = 2/61 (3%) Frame = +3 Query: 72 CPYCQKFDPSRFLNLNLSSTK--DSDKLWRVINASAKGFAIGAGLKGGLAVFSILARLKS 245 CP+C DPS ++ +S + DS+KLWR++ ASAKGF IG G+KGGLA+FS++ARL + Sbjct: 29 CPHCGGSDPSSCSSILSNSIRIQDSEKLWRIVTASAKGFTIGVGIKGGLAIFSVVARLIA 88 Query: 246 R 248 R Sbjct: 89 R 89 >emb|CBI19160.3| unnamed protein product [Vitis vinifera] Length = 568 Score = 70.9 bits (172), Expect = 1e-10 Identities = 33/61 (54%), Positives = 46/61 (75%), Gaps = 2/61 (3%) Frame = +3 Query: 72 CPYCQKFDPSRFLNLNLSSTK--DSDKLWRVINASAKGFAIGAGLKGGLAVFSILARLKS 245 CP+C DPS ++ +S + DS+KLWR++ ASAKGF IG G+KGGLA+FS++ARL + Sbjct: 29 CPHCGGSDPSSCSSILSNSIRIQDSEKLWRIVTASAKGFTIGVGIKGGLAIFSVVARLIA 88 Query: 246 R 248 R Sbjct: 89 R 89 >ref|XP_002513919.1| conserved hypothetical protein [Ricinus communis] gi|223547005|gb|EEF48502.1| conserved hypothetical protein [Ricinus communis] Length = 588 Score = 69.3 bits (168), Expect = 3e-10 Identities = 38/66 (57%), Positives = 45/66 (68%) Frame = +3 Query: 75 PYCQKFDPSRFLNLNLSSTKDSDKLWRVINASAKGFAIGAGLKGGLAVFSILARLKSRRN 254 P C S FL +L DS+KL RVI AS KGF+IGAGLKGGL++FSILARL+ R+ Sbjct: 47 PSCSSSYYSSFLGPHLIQLNDSEKLQRVITASIKGFSIGAGLKGGLSLFSILARLRRTRS 106 Query: 255 FSSVRK 272 S RK Sbjct: 107 SSHSRK 112 >ref|XP_002301052.1| predicted protein [Populus trichocarpa] gi|222842778|gb|EEE80325.1| predicted protein [Populus trichocarpa] Length = 486 Score = 66.6 bits (161), Expect = 2e-09 Identities = 38/74 (51%), Positives = 50/74 (67%) Frame = +3 Query: 51 TRSVNKKCPYCQKFDPSRFLNLNLSSTKDSDKLWRVINASAKGFAIGAGLKGGLAVFSIL 230 T + + P+C S + L+ +DS+KL RV+ ASAKGF+IGAG+KGGLA+FSIL Sbjct: 28 THCLKSEPPFCSS---SYLPGIALNPFQDSEKLARVVTASAKGFSIGAGIKGGLALFSIL 84 Query: 231 ARLKSRRNFSSVRK 272 ARL+ R SS RK Sbjct: 85 ARLR-RTRLSSTRK 97 >gb|AAF79276.1|AC023279_25 F12K21.3 [Arabidopsis thaliana] Length = 463 Score = 60.1 bits (144), Expect = 2e-07 Identities = 33/63 (52%), Positives = 37/63 (58%) Frame = +3 Query: 72 CPYCQKFDPSRFLNLNLSSTKDSDKLWRVINASAKGFAIGAGLKGGLAVFSILARLKSRR 251 C C+ D S DSDKL R+I AS KGF IG GLKGGLA+FSI+AR RR Sbjct: 34 CKQCKNSDSKS----KSKSVNDSDKLRRIIVASVKGFTIGTGLKGGLAIFSIVARFARRR 89 Query: 252 NFS 260 S Sbjct: 90 RSS 92