BLASTX nr result

ID: Coptis23_contig00023736 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023736
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284150.2| PREDICTED: uncharacterized protein LOC100260...    71   1e-10
emb|CBI19160.3| unnamed protein product [Vitis vinifera]               71   1e-10
ref|XP_002513919.1| conserved hypothetical protein [Ricinus comm...    69   3e-10
ref|XP_002301052.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
gb|AAF79276.1|AC023279_25 F12K21.3 [Arabidopsis thaliana]              60   2e-07

>ref|XP_002284150.2| PREDICTED: uncharacterized protein LOC100260863 [Vitis vinifera]
          Length = 483

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 33/61 (54%), Positives = 46/61 (75%), Gaps = 2/61 (3%)
 Frame = +3

Query: 72  CPYCQKFDPSRFLNLNLSSTK--DSDKLWRVINASAKGFAIGAGLKGGLAVFSILARLKS 245
           CP+C   DPS   ++  +S +  DS+KLWR++ ASAKGF IG G+KGGLA+FS++ARL +
Sbjct: 29  CPHCGGSDPSSCSSILSNSIRIQDSEKLWRIVTASAKGFTIGVGIKGGLAIFSVVARLIA 88

Query: 246 R 248
           R
Sbjct: 89  R 89


>emb|CBI19160.3| unnamed protein product [Vitis vinifera]
          Length = 568

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 33/61 (54%), Positives = 46/61 (75%), Gaps = 2/61 (3%)
 Frame = +3

Query: 72  CPYCQKFDPSRFLNLNLSSTK--DSDKLWRVINASAKGFAIGAGLKGGLAVFSILARLKS 245
           CP+C   DPS   ++  +S +  DS+KLWR++ ASAKGF IG G+KGGLA+FS++ARL +
Sbjct: 29  CPHCGGSDPSSCSSILSNSIRIQDSEKLWRIVTASAKGFTIGVGIKGGLAIFSVVARLIA 88

Query: 246 R 248
           R
Sbjct: 89  R 89


>ref|XP_002513919.1| conserved hypothetical protein [Ricinus communis]
           gi|223547005|gb|EEF48502.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 588

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 38/66 (57%), Positives = 45/66 (68%)
 Frame = +3

Query: 75  PYCQKFDPSRFLNLNLSSTKDSDKLWRVINASAKGFAIGAGLKGGLAVFSILARLKSRRN 254
           P C     S FL  +L    DS+KL RVI AS KGF+IGAGLKGGL++FSILARL+  R+
Sbjct: 47  PSCSSSYYSSFLGPHLIQLNDSEKLQRVITASIKGFSIGAGLKGGLSLFSILARLRRTRS 106

Query: 255 FSSVRK 272
            S  RK
Sbjct: 107 SSHSRK 112


>ref|XP_002301052.1| predicted protein [Populus trichocarpa] gi|222842778|gb|EEE80325.1|
           predicted protein [Populus trichocarpa]
          Length = 486

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 38/74 (51%), Positives = 50/74 (67%)
 Frame = +3

Query: 51  TRSVNKKCPYCQKFDPSRFLNLNLSSTKDSDKLWRVINASAKGFAIGAGLKGGLAVFSIL 230
           T  +  + P+C     S    + L+  +DS+KL RV+ ASAKGF+IGAG+KGGLA+FSIL
Sbjct: 28  THCLKSEPPFCSS---SYLPGIALNPFQDSEKLARVVTASAKGFSIGAGIKGGLALFSIL 84

Query: 231 ARLKSRRNFSSVRK 272
           ARL+ R   SS RK
Sbjct: 85  ARLR-RTRLSSTRK 97


>gb|AAF79276.1|AC023279_25 F12K21.3 [Arabidopsis thaliana]
          Length = 463

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 33/63 (52%), Positives = 37/63 (58%)
 Frame = +3

Query: 72  CPYCQKFDPSRFLNLNLSSTKDSDKLWRVINASAKGFAIGAGLKGGLAVFSILARLKSRR 251
           C  C+  D          S  DSDKL R+I AS KGF IG GLKGGLA+FSI+AR   RR
Sbjct: 34  CKQCKNSDSKS----KSKSVNDSDKLRRIIVASVKGFTIGTGLKGGLAIFSIVARFARRR 89

Query: 252 NFS 260
             S
Sbjct: 90  RSS 92


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