BLASTX nr result

ID: Coptis23_contig00023731 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023731
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003576493.1| PREDICTED: uncharacterized protein LOC100840...    67   2e-09
ref|XP_002271972.2| PREDICTED: uncharacterized protein LOC100261...    66   3e-09
emb|CBI24025.3| unnamed protein product [Vitis vinifera]               66   3e-09
dbj|BAK04490.1| predicted protein [Hordeum vulgare subsp. vulgare]     65   4e-09
dbj|BAJ94488.1| predicted protein [Hordeum vulgare subsp. vulgare]     65   4e-09

>ref|XP_003576493.1| PREDICTED: uncharacterized protein LOC100840043 [Brachypodium
           distachyon]
          Length = 895

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 37/95 (38%), Positives = 52/95 (54%)
 Frame = -1

Query: 287 CDMSDAVYVLMHTAEVNLTPQQLESIDRLKVKCHEQDRKEHVGTTSEFSKVLTECLSPSN 108
           CD+SDAV VLMHTA+V  + +Q ++I +LK +   Q+ K+  G  +          +  N
Sbjct: 659 CDISDAVNVLMHTAKVTPSEEQEDAIKKLKGRHDAQNGKDCCGNVA----------TDGN 708

Query: 107 EKCLSETVGTSSTSKTHCSQTAEGGALWDIFRRQD 3
           + C    V     S   CS+   GGALWDIFRR+D
Sbjct: 709 DTCHESYVDVDHISTRRCSEDDYGGALWDIFRRED 743


>ref|XP_002271972.2| PREDICTED: uncharacterized protein LOC100261347 [Vitis vinifera]
          Length = 1199

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 42/97 (43%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
 Frame = -1

Query: 287  CDMSDAVYVLMHTAEVNLTPQQLESIDRLKVKCHEQDRKEHVGTTSEFSKVLTECLSPSN 108
            CDMSDAV VL HTAE  L    L  I++LK +   QD++EH          L + +    
Sbjct: 980  CDMSDAVNVLTHTAEATLPSDNLAEIEKLKAQHSAQDQEEH----------LEDKVGQDG 1029

Query: 107  EKCLSETVGTSSTSKTHCS--QTAEGGALWDIFRRQD 3
             K +S   G S+ S    +  + AEGGALWDIFRRQD
Sbjct: 1030 SKKIS---GPSAISGNRLAGGKPAEGGALWDIFRRQD 1063


>emb|CBI24025.3| unnamed protein product [Vitis vinifera]
          Length = 862

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 46/96 (47%), Positives = 57/96 (59%), Gaps = 1/96 (1%)
 Frame = -1

Query: 287 CDMSDAVYVLMHTAEVNLTPQQLESIDRLKVKCH-EQDRKEHVGTTSEFSKVLTECLSPS 111
           CDMSDAV VLMHTAEV L+ QQL  I++LK KCH  QD+KE       F+ + TE    S
Sbjct: 619 CDMSDAVNVLMHTAEVTLSSQQLAVIEKLK-KCHAAQDQKE------LFAAIHTEQGEFS 671

Query: 110 NEKCLSETVGTSSTSKTHCSQTAEGGALWDIFRRQD 3
           ++         +S +K        GGA+WDIFRRQD
Sbjct: 672 DDH-------MASGNKLVGFDKEGGGAVWDIFRRQD 700


>dbj|BAK04490.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 602

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 41/95 (43%), Positives = 52/95 (54%)
 Frame = -1

Query: 287 CDMSDAVYVLMHTAEVNLTPQQLESIDRLKVKCHEQDRKEHVGTTSEFSKVLTECLSPSN 108
           CD+SDAV VLMHTA+V  +  Q  +I  LK +   QD KE  G  S         +  SN
Sbjct: 373 CDISDAVNVLMHTAQVAPSKGQENAIKNLKARHEGQDEKECCGNFS---------IDGSN 423

Query: 107 EKCLSETVGTSSTSKTHCSQTAEGGALWDIFRRQD 3
             C    V ++ T   + S+  EGGALWDIFRR+D
Sbjct: 424 -ACHKNCVDSNHTPSPNYSKDDEGGALWDIFRRED 457


>dbj|BAJ94488.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 897

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 41/95 (43%), Positives = 52/95 (54%)
 Frame = -1

Query: 287 CDMSDAVYVLMHTAEVNLTPQQLESIDRLKVKCHEQDRKEHVGTTSEFSKVLTECLSPSN 108
           CD+SDAV VLMHTA+V  +  Q  +I  LK +   QD KE  G  S         +  SN
Sbjct: 668 CDISDAVNVLMHTAQVAPSKGQENAIKNLKARHEGQDEKECCGNFS---------IDGSN 718

Query: 107 EKCLSETVGTSSTSKTHCSQTAEGGALWDIFRRQD 3
             C    V ++ T   + S+  EGGALWDIFRR+D
Sbjct: 719 -ACHKNCVDSNHTPSPNYSKDDEGGALWDIFRRED 752


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