BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023730
         (982 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525484.1| conserved hypothetical protein [Ricinus comm...   268   1e-69
ref|XP_002263903.1| PREDICTED: F-box protein At5g49610 [Vitis vi...   263   5e-68
ref|XP_002329727.1| predicted protein [Populus trichocarpa] gi|2...   263   5e-68
gb|ABK92768.1| unknown [Populus trichocarpa]                          263   5e-68
ref|XP_004171566.1| PREDICTED: F-box protein At5g07610-like [Cuc...   224   3e-56

>ref|XP_002525484.1| conserved hypothetical protein [Ricinus communis]
           gi|223535221|gb|EEF36899.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 375

 Score =  268 bits (686), Expect = 1e-69
 Identities = 143/313 (45%), Positives = 199/313 (63%), Gaps = 3/313 (0%)
 Frame = +2

Query: 53  DLAIDIFCRFPAKSVLRLQCVSKGWKDITSDTSFRQVHSQRSKPTLSGFFFQERFQLCHE 232
           D++ D+  RFPAK ++ L+ VSKGW+ +  + SF Q+ S+R +P LSGFFFQ+RFQ    
Sbjct: 11  DISFDVLSRFPAKDLVELKRVSKGWQHLIMNQSFIQIQSRRREP-LSGFFFQQRFQWSEY 69

Query: 233 DIESISYIPVDSESSTVHSNIFDFLPEKVVLMASSNGILCCRSCRKAYLPALYICNPSNK 412
           DIE+I+YIPV  E   +H  +FDFLP+ VVL+ + NG++CCRSC    LPA+++CNP NK
Sbjct: 70  DIETINYIPVKWEGLELHKKVFDFLPQDVVLLTTCNGLVCCRSCFPFELPAIFVCNPLNK 129

Query: 413 EYITLEWDGPREIESIAFTIDPSKCSKGSLDSTSFKLVSVHKIEDEMESYFSFEIYSSKT 592
           E++ L+W  P +  SIA   DP     G  +S +FKL        + + YFSF+IYSS+T
Sbjct: 130 EWVKLDWTEPDKEHSIALAFDPLLDISG--NSANFKL--------DEQLYFSFDIYSSRT 179

Query: 593 GKWISLIEEDCTCDFSLFKNRGVFANGFLYWLTDGDLLLAFDVEKEQSWLIGPPPMPANG 772
           G W +L ++ C C+ +L KN+GV+  G L+WLTD D +L FDV+ E ++LI   P+PA  
Sbjct: 180 GSW-NLSKDICWCNSNLHKNKGVYIRGVLHWLTDEDQILTFDVDNELAFLIS-APVPAAE 237

Query: 773 FSA---MCIGESDGDLHYIEISEAGIRDWFLEGCSDEPTWFLKHSISRTIMEEEHPSVFQ 943
           FS     CIGE +G LHY+ ISE G   W LE    E  W LK+S +   ME+EHP    
Sbjct: 238 FSTAPKACIGELEGCLHYVMISEEGFHIWSLEDYF-ELNWLLKYSKTLAEMEQEHPKFLL 296

Query: 944 NMAKRVTMVMNTE 982
           NM + V + M  +
Sbjct: 297 NMQELVKLQMTDD 309


>ref|XP_002263903.1| PREDICTED: F-box protein At5g49610 [Vitis vinifera]
           gi|296088512|emb|CBI37503.3| unnamed protein product
           [Vitis vinifera]
          Length = 378

 Score =  263 bits (672), Expect = 5e-68
 Identities = 142/308 (46%), Positives = 193/308 (62%), Gaps = 5/308 (1%)
 Frame = +2

Query: 53  DLAIDIFCRFPAKSVLRLQCVSKGWKDITSDTSFRQVHSQRSKPTLSGFFFQERFQLCHE 232
           D+ +D+  R P K++L L+CV K W+ I SD SF Q   QR +P L+GFFFQER+Q C E
Sbjct: 5   DICMDVLSRLPTKTLLGLKCVCKRWRRIISDRSFIQDLLQRPEP-LAGFFFQERYQWCDE 63

Query: 233 DIESISYIPVDSESSTVHSNIFDFLPEKVVLMASSNGILCCRSCRKAYLPALYICNPSNK 412
           DI +ISYIP   E + V   IF FLPE VV++ S NG++CCRS   +  P++++CNPSNK
Sbjct: 64  DISTISYIPATMEGTQVQQTIFSFLPEDVVILGSCNGLVCCRSVFPSPDPSIFVCNPSNK 123

Query: 413 EYITLEWDGPREIESIAFTIDPSKCSKGSLD-STSFKLVSVHKIEDEM--ESYFSFEIYS 583
           ++I L    P +  S     +P    +  +D  T+FK+V V + + +M  +SYFSFEIYS
Sbjct: 124 QWIRLLETTPDKESSYGLAFNP---FQSPIDMPTNFKVVRVSQAQTDMDDDSYFSFEIYS 180

Query: 584 SKTGKWISLIEEDCTCDFSLFKNRGVFANGFLYWLTDGDLLLAFDVEKEQSWLIGP--PP 757
           S+ G W    +E C C+ +LFKN+G+F  G L+WLTDGD +L+F++E E SWLI    P 
Sbjct: 181 SQAGAW-KKSKEICQCNHNLFKNKGIFVGGILHWLTDGDQVLSFNIENELSWLISAPFPT 239

Query: 758 MPANGFSAMCIGESDGDLHYIEISEAGIRDWFLEGCSDEPTWFLKHSISRTIMEEEHPSV 937
           +       MCIGES G LHYI ISE G++ W LE   D   W L HS +  +MEEE+  +
Sbjct: 240 IHLTAIPEMCIGESRGRLHYIMISEDGLQVWALEDYYDS-NWSLVHSTTLEVMEEENSQL 298

Query: 938 FQNMAKRV 961
             N   RV
Sbjct: 299 LYNTRDRV 306


>ref|XP_002329727.1| predicted protein [Populus trichocarpa] gi|222870635|gb|EEF07766.1|
           predicted protein [Populus trichocarpa]
          Length = 424

 Score =  263 bits (672), Expect = 5e-68
 Identities = 141/309 (45%), Positives = 198/309 (64%), Gaps = 4/309 (1%)
 Frame = +2

Query: 53  DLAIDIFCRFPAKSVLRLQCVSKGWKDITSDTSFRQVHSQRSKPTLSGFFFQERFQLCHE 232
           D+  D+  R   K +L L+CVSKGWKD+ SD SF Q  SQ+ +P LSGFFFQ+R + C +
Sbjct: 10  DIPFDVLSRLQTKDLLGLKCVSKGWKDLISDRSFIQAQSQKKEP-LSGFFFQQRHRYCPD 68

Query: 233 DIESISYIPVDSESSTVHSNIFDFLPEKVVLMASSNGILCCRSCRKAYLPALYICNPSNK 412
           DI++I+Y PV  E + +  ++F FLP+ VV++A  NG++CCRSC     PA+Y+CNP N 
Sbjct: 69  DIKTITYFPV--ERNRLQQDVFAFLPQDVVVLALCNGLVCCRSCYPFEDPAIYVCNPLNS 126

Query: 413 EYITLEWDGPREIESIAFTIDPSKCSKGSLDSTSFKLVSVHKIEDEM-ESYFSFEIYSSK 589
           E+  L+W  P +   IA   +P +    S++ T+FK+V   + E E  E+YFSFEIY+S+
Sbjct: 127 EWWKLDWKEPGKESFIALAFNPFQ--DISVNLTNFKVVRPRQFETEQEEAYFSFEIYASR 184

Query: 590 TGKWISLIEEDCTCDFSLFKNRGVFANGFLYWLTDGDLLLAFDVEKEQSWLIGPPPMPAN 769
           T  W  L +E C CD SL KN G+F+ G L+WLTDGD +L F+VE E + LI   P+PA 
Sbjct: 185 TRNW-KLSKEVCWCDNSLSKNEGIFSGGILHWLTDGDQILTFNVENELALLIS-TPLPAG 242

Query: 770 GFSA---MCIGESDGDLHYIEISEAGIRDWFLEGCSDEPTWFLKHSISRTIMEEEHPSVF 940
            F+     CIGES+G L+Y+ ISE G+  W LE   D  TW LK+S +   +E+EH  + 
Sbjct: 243 EFNTRPHACIGESEGQLYYVLISEEGLHVWVLEDYFDS-TWSLKYSKTLAQIEKEHSDIM 301

Query: 941 QNMAKRVTM 967
            N+  RV +
Sbjct: 302 INLYNRVML 310


>gb|ABK92768.1| unknown [Populus trichocarpa]
          Length = 384

 Score =  263 bits (672), Expect = 5e-68
 Identities = 141/309 (45%), Positives = 198/309 (64%), Gaps = 4/309 (1%)
 Frame = +2

Query: 53  DLAIDIFCRFPAKSVLRLQCVSKGWKDITSDTSFRQVHSQRSKPTLSGFFFQERFQLCHE 232
           D+  D+  R   K +L L+CVSKGWKD+ SD SF Q  SQ+ +P LSGFFFQ+R + C +
Sbjct: 10  DIPFDVLSRLQTKDLLGLKCVSKGWKDLISDRSFIQAQSQKKEP-LSGFFFQQRHRYCPD 68

Query: 233 DIESISYIPVDSESSTVHSNIFDFLPEKVVLMASSNGILCCRSCRKAYLPALYICNPSNK 412
           DI++I+Y PV  E + +  ++F FLP+ VV++A  NG++CCRSC     PA+Y+CNP N 
Sbjct: 69  DIKTITYFPV--ERNRLQQDVFAFLPQDVVVLALCNGLVCCRSCYPFEDPAIYVCNPLNS 126

Query: 413 EYITLEWDGPREIESIAFTIDPSKCSKGSLDSTSFKLVSVHKIEDEM-ESYFSFEIYSSK 589
           E+  L+W  P +   IA   +P +    S++ T+FK+V   + E E  E+YFSFEIY+S+
Sbjct: 127 EWWKLDWKEPGKESFIALAFNPFQ--DISVNLTNFKVVRPRQFETEQEEAYFSFEIYASR 184

Query: 590 TGKWISLIEEDCTCDFSLFKNRGVFANGFLYWLTDGDLLLAFDVEKEQSWLIGPPPMPAN 769
           T  W  L +E C CD SL KN G+F+ G L+WLTDGD +L F+VE E + LI   P+PA 
Sbjct: 185 TRNW-KLSKEVCWCDNSLSKNEGIFSGGILHWLTDGDQILTFNVENELALLIS-TPLPAG 242

Query: 770 GFSA---MCIGESDGDLHYIEISEAGIRDWFLEGCSDEPTWFLKHSISRTIMEEEHPSVF 940
            F+     CIGES+G L+Y+ ISE G+  W LE   D  TW LK+S +   +E+EH  + 
Sbjct: 243 EFNTRPHACIGESEGQLYYVLISEEGLHVWVLEDYFDS-TWSLKYSKTLAQIEKEHSDIM 301

Query: 941 QNMAKRVTM 967
            N+  RV +
Sbjct: 302 INLYNRVML 310


>ref|XP_004171566.1| PREDICTED: F-box protein At5g07610-like [Cucumis sativus]
          Length = 399

 Score =  224 bits (570), Expect = 3e-56
 Identities = 127/311 (40%), Positives = 183/311 (58%), Gaps = 10/311 (3%)
 Frame = +2

Query: 53  DLAIDIFCRFPAKSVLRLQCVSKGWKDITSDTSFRQVHSQRSKPTLSGFFFQERFQLCHE 232
           D+  D+  R P K++L ++ VSK W  +  D SF Q   Q+    LSGF FQE+++ C  
Sbjct: 6   DILFDVLSRLPTKTLLEMRFVSKAWHRLILDRSFVQAQFQKCGLALSGFMFQEKYRKCPI 65

Query: 233 DIESISYIPVDSESSTVHSNIFDFLPEKVVLMASSNGILCCRSCRK-----AYLPALYIC 397
           DI + +Y+P+D++S  V   +F FLPE VV++ S NG++CCRSC +      +   +Y+C
Sbjct: 66  DISTFTYMPIDADSK-VQKMVFGFLPEDVVILQSCNGLVCCRSCFRTQHSTTHSTTIYVC 124

Query: 398 NPSNKEYITLEWDGPREIESIAFTIDPSKCSKGSLDSTSFKLVSVHKIEDEMES-YFSFE 574
           NP  K++++ E        SIA   DP      +  +T+FK+V + ++E+E E  Y++FE
Sbjct: 125 NPLFKKWVSFEVAQLDSFSSIALAFDPILDPVNT--ATNFKVVRIQQLENEQEEMYYTFE 182

Query: 575 IYSSKTGKWISLIEEDCTCDFSLFKNRGVFANGFLYWLTDGDLLLAFDVEKEQSWLIGPP 754
           IYSS+TG W     E C  D +L KN G +A G L+WLTD D +LAFD EKE S L+ P 
Sbjct: 183 IYSSETGTW-KESSEVCYSDGNLLKNNGTYAKGVLHWLTDTDQILAFDTEKELSLLV-PS 240

Query: 755 PMPANGF----SAMCIGESDGDLHYIEISEAGIRDWFLEGCSDEPTWFLKHSISRTIMEE 922
           P+PA          CIGES G LH+I I E GI  W L+    E  W LKHS    ++E+
Sbjct: 241 PIPALEMFIDAPGTCIGESKGLLHFIMICEDGIIVWCLDDYF-EAKWTLKHSKQLQMIED 299

Query: 923 EHPSVFQNMAK 955
           E+P++F  + K
Sbjct: 300 ENPNMFFKLYK 310