BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023727
         (1529 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278964.2| PREDICTED: flap endonuclease 1-like [Vitis v...   593   e-167
emb|CBI39682.3| unnamed protein product [Vitis vinifera]              593   e-167
ref|XP_003555770.1| PREDICTED: flap endonuclease 1-like [Glycine...   585   e-164
ref|XP_004163772.1| PREDICTED: LOW QUALITY PROTEIN: flap endonuc...   582   e-164
ref|NP_850877.2| flap endonuclease-1 [Arabidopsis thaliana] gi|3...   582   e-164

>ref|XP_002278964.2| PREDICTED: flap endonuclease 1-like [Vitis vinifera]
          Length = 384

 Score =  593 bits (1530), Expect = e-167
 Identities = 295/358 (82%), Positives = 316/358 (88%)
 Frame = +3

Query: 117  MGIKGLTKLLADNAPKCMKEQKFESFFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE 296
            MGIKGLTKLLADNAPK MKEQKFESFFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE
Sbjct: 1    MGIKGLTKLLADNAPKAMKEQKFESFFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE 60

Query: 297  VTSHLQGMFSRTIRLLEAGIKPAYVFDGKPPDLKKQELAKRYSKRADATEDLAEAIETGE 476
            VTSHLQGMFSRTIRLLEAG+KP YVFDGKPPDLKKQELAKR+S+RADATEDL EA+ETG 
Sbjct: 61   VTSHLQGMFSRTIRLLEAGLKPVYVFDGKPPDLKKQELAKRFSRRADATEDLTEALETGN 120

Query: 477  KEDIEKFSKRTVKVTKQHNDDCKKLLRLMGVPVVXXXXXXXXXXXXLCKSGKVYAVASED 656
            KE+IEKFSKRTVKVTKQHN+DCKKLLRLMGVPV+            LCKSGKVYAVASED
Sbjct: 121  KEEIEKFSKRTVKVTKQHNEDCKKLLRLMGVPVIEAPSEAEAQCAALCKSGKVYAVASED 180

Query: 657  MDSLTFGAPKFLRHLMDPITRKIPVMEFEVAKILEELNLTMDQFIDFCILCGCDYCDSIR 836
            MDSLTFGAPKFLRHLMDP +RKIPVMEF++ KILEELNLTMDQFID CIL GCDYCDSIR
Sbjct: 181  MDSLTFGAPKFLRHLMDPSSRKIPVMEFDITKILEELNLTMDQFIDLCILSGCDYCDSIR 240

Query: 837  GIGGQTALKLIRQHGSIENILENINKERYQIPESWPYQEARQLFKEPLVSVDDDQSELKW 1016
            GIGGQTALKLIRQHGSIENILENIN+ERYQIP+ WPYQEAR+LFKEP V  DD+Q ++KW
Sbjct: 241  GIGGQTALKLIRQHGSIENILENINRERYQIPDDWPYQEARRLFKEPQVFSDDEQLDIKW 300

Query: 1017 AVPDEEGLINFLVNENGFNIDRVTXXXXXXXXXXXXSSQGRLESFFKPVATASVALKR 1190
            + PDEEGLI FLVNENGFN DRVT            SSQGRLESFFKPV ++S+ +KR
Sbjct: 301  SAPDEEGLITFLVNENGFNSDRVTKAIEKIKTAKNKSSQGRLESFFKPVVSSSIPIKR 358


>emb|CBI39682.3| unnamed protein product [Vitis vinifera]
          Length = 416

 Score =  593 bits (1530), Expect = e-167
 Identities = 295/358 (82%), Positives = 316/358 (88%)
 Frame = +3

Query: 117  MGIKGLTKLLADNAPKCMKEQKFESFFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE 296
            MGIKGLTKLLADNAPK MKEQKFESFFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE
Sbjct: 1    MGIKGLTKLLADNAPKAMKEQKFESFFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE 60

Query: 297  VTSHLQGMFSRTIRLLEAGIKPAYVFDGKPPDLKKQELAKRYSKRADATEDLAEAIETGE 476
            VTSHLQGMFSRTIRLLEAG+KP YVFDGKPPDLKKQELAKR+S+RADATEDL EA+ETG 
Sbjct: 61   VTSHLQGMFSRTIRLLEAGLKPVYVFDGKPPDLKKQELAKRFSRRADATEDLTEALETGN 120

Query: 477  KEDIEKFSKRTVKVTKQHNDDCKKLLRLMGVPVVXXXXXXXXXXXXLCKSGKVYAVASED 656
            KE+IEKFSKRTVKVTKQHN+DCKKLLRLMGVPV+            LCKSGKVYAVASED
Sbjct: 121  KEEIEKFSKRTVKVTKQHNEDCKKLLRLMGVPVIEAPSEAEAQCAALCKSGKVYAVASED 180

Query: 657  MDSLTFGAPKFLRHLMDPITRKIPVMEFEVAKILEELNLTMDQFIDFCILCGCDYCDSIR 836
            MDSLTFGAPKFLRHLMDP +RKIPVMEF++ KILEELNLTMDQFID CIL GCDYCDSIR
Sbjct: 181  MDSLTFGAPKFLRHLMDPSSRKIPVMEFDITKILEELNLTMDQFIDLCILSGCDYCDSIR 240

Query: 837  GIGGQTALKLIRQHGSIENILENINKERYQIPESWPYQEARQLFKEPLVSVDDDQSELKW 1016
            GIGGQTALKLIRQHGSIENILENIN+ERYQIP+ WPYQEAR+LFKEP V  DD+Q ++KW
Sbjct: 241  GIGGQTALKLIRQHGSIENILENINRERYQIPDDWPYQEARRLFKEPQVFSDDEQLDIKW 300

Query: 1017 AVPDEEGLINFLVNENGFNIDRVTXXXXXXXXXXXXSSQGRLESFFKPVATASVALKR 1190
            + PDEEGLI FLVNENGFN DRVT            SSQGRLESFFKPV ++S+ +KR
Sbjct: 301  SAPDEEGLITFLVNENGFNSDRVTKAIEKIKTAKNKSSQGRLESFFKPVVSSSIPIKR 358


>ref|XP_003555770.1| PREDICTED: flap endonuclease 1-like [Glycine max]
          Length = 382

 Score =  585 bits (1507), Expect = e-164
 Identities = 292/358 (81%), Positives = 313/358 (87%)
 Frame = +3

Query: 117  MGIKGLTKLLADNAPKCMKEQKFESFFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE 296
            MGIKGLTKLLADNAPK MKE KFES+FGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE
Sbjct: 1    MGIKGLTKLLADNAPKSMKENKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE 60

Query: 297  VTSHLQGMFSRTIRLLEAGIKPAYVFDGKPPDLKKQELAKRYSKRADATEDLAEAIETGE 476
            VTSHLQGMFSRTIRLLEAGIKP YVFDGKPPDLKKQELAKRYSKRA+ATEDL+EA+ET  
Sbjct: 61   VTSHLQGMFSRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKRAEATEDLSEALETAN 120

Query: 477  KEDIEKFSKRTVKVTKQHNDDCKKLLRLMGVPVVXXXXXXXXXXXXLCKSGKVYAVASED 656
            KEDIEKFSKRTVKVTKQHNDDCK+LLRLMGVPVV            LCK+GKVYAVASED
Sbjct: 121  KEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVVEAPSEAEAQCAALCKAGKVYAVASED 180

Query: 657  MDSLTFGAPKFLRHLMDPITRKIPVMEFEVAKILEELNLTMDQFIDFCILCGCDYCDSIR 836
            MDSLTFG+PKFLRHLMDP ++KIPVMEFEVAKILEELN+TMDQFID CIL GCDYCDSIR
Sbjct: 181  MDSLTFGSPKFLRHLMDPSSKKIPVMEFEVAKILEELNMTMDQFIDLCILSGCDYCDSIR 240

Query: 837  GIGGQTALKLIRQHGSIENILENINKERYQIPESWPYQEARQLFKEPLVSVDDDQSELKW 1016
            GIGG TALKLIRQHGSIENILEN+NKERYQIP++WPYQEAR+LFKEP+V  D+ + ++KW
Sbjct: 241  GIGGLTALKLIRQHGSIENILENLNKERYQIPDNWPYQEARRLFKEPMVITDEKELDIKW 300

Query: 1017 AVPDEEGLINFLVNENGFNIDRVTXXXXXXXXXXXXSSQGRLESFFKPVATASVALKR 1190
            + PDEEGLI FLVNENGFN DRVT            SSQGRLESFFKP    SV +KR
Sbjct: 301  SSPDEEGLITFLVNENGFNSDRVTKAIEKIKVAKNKSSQGRLESFFKPTVNPSVPIKR 358


>ref|XP_004163772.1| PREDICTED: LOW QUALITY PROTEIN: flap endonuclease 1-like [Cucumis
            sativus]
          Length = 382

 Score =  582 bits (1501), Expect = e-164
 Identities = 290/358 (81%), Positives = 313/358 (87%)
 Frame = +3

Query: 117  MGIKGLTKLLADNAPKCMKEQKFESFFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE 296
            MGIKGLTKLLADNAPK MKEQKFE++FGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE
Sbjct: 1    MGIKGLTKLLADNAPKGMKEQKFEAYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE 60

Query: 297  VTSHLQGMFSRTIRLLEAGIKPAYVFDGKPPDLKKQELAKRYSKRADATEDLAEAIETGE 476
            VTSHLQGMF+RTIRLLEAGIKP YVFDGKPPDLK QELAKRYSKRADATEDLA+AIE G 
Sbjct: 61   VTSHLQGMFNRTIRLLEAGIKPVYVFDGKPPDLKXQELAKRYSKRADATEDLADAIEVGN 120

Query: 477  KEDIEKFSKRTVKVTKQHNDDCKKLLRLMGVPVVXXXXXXXXXXXXLCKSGKVYAVASED 656
            K+DIEKFSKRTVKVTKQHNDDCK+LLRLMGVPV+            LCK GKVYAVASED
Sbjct: 121  KDDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLGKVYAVASED 180

Query: 657  MDSLTFGAPKFLRHLMDPITRKIPVMEFEVAKILEELNLTMDQFIDFCILCGCDYCDSIR 836
            MDSLTFG+P+FLRHLMDP +RKIPVMEFEVAKILEELNLTMDQFID CIL GCDYCD+IR
Sbjct: 181  MDSLTFGSPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFIDLCILSGCDYCDNIR 240

Query: 837  GIGGQTALKLIRQHGSIENILENINKERYQIPESWPYQEARQLFKEPLVSVDDDQSELKW 1016
            GIGG TALKLIRQHGSIE+ILENINKERYQIP+ WPY+EARQLFKEPLV  D++Q ++KW
Sbjct: 241  GIGGLTALKLIRQHGSIESILENINKERYQIPDDWPYKEARQLFKEPLVCTDEEQLDIKW 300

Query: 1017 AVPDEEGLINFLVNENGFNIDRVTXXXXXXXXXXXXSSQGRLESFFKPVATASVALKR 1190
              PDEEGL+ FLVNENGFN +RVT            SSQGR+ESFFKPV   SV++KR
Sbjct: 301  TTPDEEGLLTFLVNENGFNSERVTKAVEKIKAAKNKSSQGRMESFFKPVTNPSVSIKR 358


>ref|NP_850877.2| flap endonuclease-1 [Arabidopsis thaliana]
            gi|332006193|gb|AED93576.1| flap endonuclease-1
            [Arabidopsis thaliana]
          Length = 453

 Score =  582 bits (1501), Expect = e-164
 Identities = 291/358 (81%), Positives = 309/358 (86%)
 Frame = +3

Query: 117  MGIKGLTKLLADNAPKCMKEQKFESFFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE 296
            MGIKGLTKLLADNAP CMKEQKFES+FGRKIA+DASMSIYQFLIVVGR+GTEMLTNEAGE
Sbjct: 1    MGIKGLTKLLADNAPSCMKEQKFESYFGRKIAVDASMSIYQFLIVVGRTGTEMLTNEAGE 60

Query: 297  VTSHLQGMFSRTIRLLEAGIKPAYVFDGKPPDLKKQELAKRYSKRADATEDLAEAIETGE 476
            VTSHLQGMF+RTIRLLEAGIKP YVFDGKPP+LK+QELAKRYSKRADAT DL  AIE G 
Sbjct: 61   VTSHLQGMFNRTIRLLEAGIKPVYVFDGKPPELKRQELAKRYSKRADATADLTGAIEAGN 120

Query: 477  KEDIEKFSKRTVKVTKQHNDDCKKLLRLMGVPVVXXXXXXXXXXXXLCKSGKVYAVASED 656
            KEDIEK+SKRTVKVTKQHNDDCK+LLRLMGVPVV            LCKSGKVY VASED
Sbjct: 121  KEDIEKYSKRTVKVTKQHNDDCKRLLRLMGVPVVEATSEAEAQCAALCKSGKVYGVASED 180

Query: 657  MDSLTFGAPKFLRHLMDPITRKIPVMEFEVAKILEELNLTMDQFIDFCILCGCDYCDSIR 836
            MDSLTFGAPKFLRHLMDP +RKIPVMEFEVAKILEEL LTMDQFID CIL GCDYCDSIR
Sbjct: 181  MDSLTFGAPKFLRHLMDPSSRKIPVMEFEVAKILEELQLTMDQFIDLCILSGCDYCDSIR 240

Query: 837  GIGGQTALKLIRQHGSIENILENINKERYQIPESWPYQEARQLFKEPLVSVDDDQSELKW 1016
            GIGGQTALKLIRQHGSIE ILEN+NKERYQIPE WPY EAR+LFKEP V  D++Q ++KW
Sbjct: 241  GIGGQTALKLIRQHGSIETILENLNKERYQIPEEWPYNEARKLFKEPDVITDEEQLDIKW 300

Query: 1017 AVPDEEGLINFLVNENGFNIDRVTXXXXXXXXXXXXSSQGRLESFFKPVATASVALKR 1190
              PDEEG++ FLVNENGFNIDRVT            SSQGRLESFFKPVA +SV  KR
Sbjct: 301  TSPDEEGIVQFLVNENGFNIDRVTKAIEKIKTAKNKSSQGRLESFFKPVANSSVPAKR 358