BLASTX nr result

ID: Coptis23_contig00023721 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023721
         (426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301558.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16
ref|XP_002270749.1| PREDICTED: tankyrase-2-like [Vitis vinifera]       84   2e-14
emb|CAN75193.1| hypothetical protein VITISV_016148 [Vitis vinifera]    84   2e-14
ref|XP_003518941.1| PREDICTED: ankyrin-1-like [Glycine max]            62   5e-08
ref|XP_003591578.1| Ankyrin repeat domain-containing protein [Me...    57   2e-06

>ref|XP_002301558.1| predicted protein [Populus trichocarpa] gi|222843284|gb|EEE80831.1|
           predicted protein [Populus trichocarpa]
          Length = 478

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 40/70 (57%), Positives = 54/70 (77%)
 Frame = -2

Query: 425 VDNLGYTPLHCAVEAGHTKVALYLIAHGAKGNLKSIQGLSTLNLDPFKNHPAFVSPLCGK 246
           VDN GYTPLHCAVEAGH +VAL L+AHGA   +KS++G+  LN+D FKNHP+ V PLC +
Sbjct: 408 VDNAGYTPLHCAVEAGHMQVALLLVAHGASAKVKSLKGIVPLNMDCFKNHPSLVKPLCQE 467

Query: 245 TEQV*RELTM 216
            ++   E+++
Sbjct: 468 EKKSETEVSV 477


>ref|XP_002270749.1| PREDICTED: tankyrase-2-like [Vitis vinifera]
          Length = 472

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 37/63 (58%), Positives = 49/63 (77%)
 Frame = -2

Query: 425 VDNLGYTPLHCAVEAGHTKVALYLIAHGAKGNLKSIQGLSTLNLDPFKNHPAFVSPLCGK 246
           VD+ GYTPLHCAVE GH +VAL LIAHGA+  +KS++G+++ N D FKNHP+ V P+  +
Sbjct: 409 VDDAGYTPLHCAVETGHVQVALCLIAHGARATVKSLKGVASFNFDCFKNHPSLVLPVHRE 468

Query: 245 TEQ 237
            EQ
Sbjct: 469 KEQ 471


>emb|CAN75193.1| hypothetical protein VITISV_016148 [Vitis vinifera]
          Length = 472

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 37/63 (58%), Positives = 49/63 (77%)
 Frame = -2

Query: 425 VDNLGYTPLHCAVEAGHTKVALYLIAHGAKGNLKSIQGLSTLNLDPFKNHPAFVSPLCGK 246
           VD+ GYTPLHCAVE GH +VAL LIAHGA+  +KS++G+++ N D FKNHP+ V P+  +
Sbjct: 409 VDDAGYTPLHCAVETGHVQVALCLIAHGARATVKSLKGVASFNFDCFKNHPSLVLPVHRE 468

Query: 245 TEQ 237
            EQ
Sbjct: 469 KEQ 471


>ref|XP_003518941.1| PREDICTED: ankyrin-1-like [Glycine max]
          Length = 455

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 32/51 (62%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
 Frame = -2

Query: 425 VDNLGYTPLHCAVEAGHTKVALYLIAHGA-KGNLKSIQGLSTLNLDPFKNH 276
           VD+ GYTPLHCA +AGH +VALYLIAHGA + NLKS   L+     PF+NH
Sbjct: 404 VDDAGYTPLHCAAQAGHLQVALYLIAHGASQPNLKSFPHLA----HPFQNH 450


>ref|XP_003591578.1| Ankyrin repeat domain-containing protein [Medicago truncatula]
           gi|285020722|gb|ADC33496.1| vapyrin-like protein
           [Medicago truncatula] gi|355480626|gb|AES61829.1|
           Ankyrin repeat domain-containing protein [Medicago
           truncatula]
          Length = 464

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 28/43 (65%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
 Frame = -2

Query: 425 VDNLGYTPLHCAVEAGHTKVALYLIAH-GAKGNLKSIQGLSTL 300
           VD+ GYTPLHCA EAGH +VAL LIAH G + NLKS Q +S +
Sbjct: 402 VDDAGYTPLHCAAEAGHLQVALVLIAHGGCQTNLKSFQHVSPI 444


Top