BLASTX nr result
ID: Coptis23_contig00023712
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00023712 (400 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003635065.1| PREDICTED: uncharacterized protein LOC100233... 59 5e-07 ref|XP_002304995.1| predicted protein [Populus trichocarpa] gi|2... 55 8e-06 >ref|XP_003635065.1| PREDICTED: uncharacterized protein LOC100233117 [Vitis vinifera] Length = 89 Score = 58.5 bits (140), Expect = 5e-07 Identities = 33/79 (41%), Positives = 44/79 (55%) Frame = +2 Query: 2 MKVMKGIKEQAVTKCEASVNKYSIKETSHSRSNELRRFCSVXXXXXXXXXXXXXXGDEKL 181 M+VM G+K+QA +KC+ ++ S S S + RRF +E+L Sbjct: 15 MRVMLGMKDQA-SKCDPTLKSLRDSGCSSSSSTQARRFSGALDSAAFKAVKN---AEERL 70 Query: 182 KHAEESLRMVMYLSCWGPN 238 K +EESLR VMYLSCWGPN Sbjct: 71 KQSEESLRTVMYLSCWGPN 89 >ref|XP_002304995.1| predicted protein [Populus trichocarpa] gi|222847959|gb|EEE85506.1| predicted protein [Populus trichocarpa] Length = 87 Score = 54.7 bits (130), Expect = 8e-06 Identities = 32/79 (40%), Positives = 44/79 (55%) Frame = +2 Query: 2 MKVMKGIKEQAVTKCEASVNKYSIKETSHSRSNELRRFCSVXXXXXXXXXXXXXXGDEKL 181 ++V++G+K+QA +KC++S K S S + RRF +EK Sbjct: 15 VRVVQGMKDQA-SKCDSSAIKSLRDSACSSSSKQARRFSGSVDSSAYMNAK-----NEKF 68 Query: 182 KHAEESLRMVMYLSCWGPN 238 K AEESLR VM+LSCWGPN Sbjct: 69 KQAEESLRTVMFLSCWGPN 87