BLASTX nr result

ID: Coptis23_contig00023712 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023712
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635065.1| PREDICTED: uncharacterized protein LOC100233...    59   5e-07
ref|XP_002304995.1| predicted protein [Populus trichocarpa] gi|2...    55   8e-06

>ref|XP_003635065.1| PREDICTED: uncharacterized protein LOC100233117 [Vitis vinifera]
          Length = 89

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 33/79 (41%), Positives = 44/79 (55%)
 Frame = +2

Query: 2   MKVMKGIKEQAVTKCEASVNKYSIKETSHSRSNELRRFCSVXXXXXXXXXXXXXXGDEKL 181
           M+VM G+K+QA +KC+ ++        S S S + RRF                  +E+L
Sbjct: 15  MRVMLGMKDQA-SKCDPTLKSLRDSGCSSSSSTQARRFSGALDSAAFKAVKN---AEERL 70

Query: 182 KHAEESLRMVMYLSCWGPN 238
           K +EESLR VMYLSCWGPN
Sbjct: 71  KQSEESLRTVMYLSCWGPN 89


>ref|XP_002304995.1| predicted protein [Populus trichocarpa] gi|222847959|gb|EEE85506.1|
           predicted protein [Populus trichocarpa]
          Length = 87

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 32/79 (40%), Positives = 44/79 (55%)
 Frame = +2

Query: 2   MKVMKGIKEQAVTKCEASVNKYSIKETSHSRSNELRRFCSVXXXXXXXXXXXXXXGDEKL 181
           ++V++G+K+QA +KC++S  K        S S + RRF                  +EK 
Sbjct: 15  VRVVQGMKDQA-SKCDSSAIKSLRDSACSSSSKQARRFSGSVDSSAYMNAK-----NEKF 68

Query: 182 KHAEESLRMVMYLSCWGPN 238
           K AEESLR VM+LSCWGPN
Sbjct: 69  KQAEESLRTVMFLSCWGPN 87


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