BLASTX nr result

ID: Coptis23_contig00023706 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023706
         (1527 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17922.3| unnamed protein product [Vitis vinifera]              713   0.0  
ref|XP_002275124.1| PREDICTED: guanylate-binding protein 4-like ...   713   0.0  
ref|XP_002520972.1| interferon-induced guanylate-binding protein...   702   0.0  
ref|XP_004162193.1| PREDICTED: guanylate-binding protein 4-like ...   700   0.0  
ref|XP_004146960.1| PREDICTED: guanylate-binding protein 4-like ...   700   0.0  

>emb|CBI17922.3| unnamed protein product [Vitis vinifera]
          Length = 602

 Score =  713 bits (1840), Expect = 0.0
 Identities = 355/435 (81%), Positives = 384/435 (88%), Gaps = 1/435 (0%)
 Frame = -1

Query: 1527 LSFAVELAEEFYGRVKGQDVAFEPAKLLWLIQRDFLQGKSVQEMVNEALQQVPNYDGDRN 1348
            LSFAVELAEEFYGRVKGQDVAFEPAKLLWLIQRDFLQGKSVQEMVNEAL+ VPNYDGD+N
Sbjct: 168  LSFAVELAEEFYGRVKGQDVAFEPAKLLWLIQRDFLQGKSVQEMVNEALRHVPNYDGDKN 227

Query: 1347 IAQVNQIREYLETMGDNSTAFSLPQPHLQRTKLCDLKDDELDPSYVAKREQLKYLVASII 1168
            I QVNQIR+ L  MGDNSTAFSLPQPHLQRT+LCD+KD ELDP+YV KR+QLK +VASII
Sbjct: 228  IEQVNQIRDSLAIMGDNSTAFSLPQPHLQRTRLCDMKDGELDPAYVQKRDQLKEVVASII 287

Query: 1167 RPKVVQAKTLNGKQFVAFLEQILEALNKGEIPSTGSLVEVFNKKILERCLKLYSQRMDKL 988
            RPK+VQ K LNGK+FV+F+EQILEALNKGEIPSTGSLVEVFNK ILERCLKLYS+RM K+
Sbjct: 288  RPKIVQGKPLNGKEFVSFMEQILEALNKGEIPSTGSLVEVFNKGILERCLKLYSERMGKV 347

Query: 987  HLPISEQSLQKEHDESRQEAMEAFDEQHFGHHHAKRSVDTLDEEIQKIYKNFILANEYQS 808
             LP+SE+ L + H+ SR EAM  FDEQHFG +HAK+SV TLDEEIQKIYKNFILANEYQS
Sbjct: 348  ALPLSEKYLLEAHEGSRGEAMNVFDEQHFGRYHAKKSVTTLDEEIQKIYKNFILANEYQS 407

Query: 807  SKLCEALYTDCEDKMDHLQVLRLPSMAKFNAGFLQCNQSFEEECVGPSKMRFEQRMLKMM 628
            SKLCEALYT CEDKMD LQVLRLPSMAKFNAGFL CNQSF +ECVGPSK  +EQRM KMM
Sbjct: 408  SKLCEALYTRCEDKMDQLQVLRLPSMAKFNAGFLHCNQSFGKECVGPSKTNYEQRMTKMM 467

Query: 627  GKSRSLFIKEYNHRLFNWLVAFALVMVVVGRFVIKFILLEIAAWILFIFLETYTRMFWSA 448
             KSRSLFIKEYNHRLFNWLVAF+L MVVVGRFVIKFILLEI AWILFIFLETYTRMFWSA
Sbjct: 468  QKSRSLFIKEYNHRLFNWLVAFSLFMVVVGRFVIKFILLEIGAWILFIFLETYTRMFWSA 527

Query: 447  ESLYYNPVWHFIVASWEMLVYSPILDLDRWAXXXXXXXXXXXIYWRCCARRRPGSHWVLP 268
            ESLYYNPVWHFIVA+WE LVYSPILDLDRWA           +YWRC  RR+ GS  +LP
Sbjct: 528  ESLYYNPVWHFIVATWETLVYSPILDLDRWAIPICVLVAILVLYWRCYGRRKHGSRGLLP 587

Query: 267  LYNSNKGGS-RPRSD 226
            LYN++KGGS R RSD
Sbjct: 588  LYNNHKGGSNRRRSD 602


>ref|XP_002275124.1| PREDICTED: guanylate-binding protein 4-like [Vitis vinifera]
          Length = 674

 Score =  713 bits (1840), Expect = 0.0
 Identities = 355/435 (81%), Positives = 384/435 (88%), Gaps = 1/435 (0%)
 Frame = -1

Query: 1527 LSFAVELAEEFYGRVKGQDVAFEPAKLLWLIQRDFLQGKSVQEMVNEALQQVPNYDGDRN 1348
            LSFAVELAEEFYGRVKGQDVAFEPAKLLWLIQRDFLQGKSVQEMVNEAL+ VPNYDGD+N
Sbjct: 240  LSFAVELAEEFYGRVKGQDVAFEPAKLLWLIQRDFLQGKSVQEMVNEALRHVPNYDGDKN 299

Query: 1347 IAQVNQIREYLETMGDNSTAFSLPQPHLQRTKLCDLKDDELDPSYVAKREQLKYLVASII 1168
            I QVNQIR+ L  MGDNSTAFSLPQPHLQRT+LCD+KD ELDP+YV KR+QLK +VASII
Sbjct: 300  IEQVNQIRDSLAIMGDNSTAFSLPQPHLQRTRLCDMKDGELDPAYVQKRDQLKEVVASII 359

Query: 1167 RPKVVQAKTLNGKQFVAFLEQILEALNKGEIPSTGSLVEVFNKKILERCLKLYSQRMDKL 988
            RPK+VQ K LNGK+FV+F+EQILEALNKGEIPSTGSLVEVFNK ILERCLKLYS+RM K+
Sbjct: 360  RPKIVQGKPLNGKEFVSFMEQILEALNKGEIPSTGSLVEVFNKGILERCLKLYSERMGKV 419

Query: 987  HLPISEQSLQKEHDESRQEAMEAFDEQHFGHHHAKRSVDTLDEEIQKIYKNFILANEYQS 808
             LP+SE+ L + H+ SR EAM  FDEQHFG +HAK+SV TLDEEIQKIYKNFILANEYQS
Sbjct: 420  ALPLSEKYLLEAHEGSRGEAMNVFDEQHFGRYHAKKSVTTLDEEIQKIYKNFILANEYQS 479

Query: 807  SKLCEALYTDCEDKMDHLQVLRLPSMAKFNAGFLQCNQSFEEECVGPSKMRFEQRMLKMM 628
            SKLCEALYT CEDKMD LQVLRLPSMAKFNAGFL CNQSF +ECVGPSK  +EQRM KMM
Sbjct: 480  SKLCEALYTRCEDKMDQLQVLRLPSMAKFNAGFLHCNQSFGKECVGPSKTNYEQRMTKMM 539

Query: 627  GKSRSLFIKEYNHRLFNWLVAFALVMVVVGRFVIKFILLEIAAWILFIFLETYTRMFWSA 448
             KSRSLFIKEYNHRLFNWLVAF+L MVVVGRFVIKFILLEI AWILFIFLETYTRMFWSA
Sbjct: 540  QKSRSLFIKEYNHRLFNWLVAFSLFMVVVGRFVIKFILLEIGAWILFIFLETYTRMFWSA 599

Query: 447  ESLYYNPVWHFIVASWEMLVYSPILDLDRWAXXXXXXXXXXXIYWRCCARRRPGSHWVLP 268
            ESLYYNPVWHFIVA+WE LVYSPILDLDRWA           +YWRC  RR+ GS  +LP
Sbjct: 600  ESLYYNPVWHFIVATWETLVYSPILDLDRWAIPICVLVAILVLYWRCYGRRKHGSRGLLP 659

Query: 267  LYNSNKGGS-RPRSD 226
            LYN++KGGS R RSD
Sbjct: 660  LYNNHKGGSNRRRSD 674


>ref|XP_002520972.1| interferon-induced guanylate-binding protein, putative [Ricinus
            communis] gi|223539809|gb|EEF41389.1| interferon-induced
            guanylate-binding protein, putative [Ricinus communis]
          Length = 631

 Score =  702 bits (1812), Expect = 0.0
 Identities = 355/464 (76%), Positives = 387/464 (83%), Gaps = 30/464 (6%)
 Frame = -1

Query: 1527 LSFAVELAEEFYGR-----------------------------VKGQDVAFEPAKLLWLI 1435
            LSFAVELAEEFYGR                             VKGQDVAFEPAKLLWLI
Sbjct: 168  LSFAVELAEEFYGRSALLLCSEFSRVSLLLFYGLADNYIMENRVKGQDVAFEPAKLLWLI 227

Query: 1434 QRDFLQGKSVQEMVNEALQQVPNYDGDRNIAQVNQIREYLETMGDNSTAFSLPQPHLQRT 1255
            QRDFLQGKSVQ+MVNEALQ+VPN DGDRNI QVNQIRE L  MGDNSTAFSLPQPHLQRT
Sbjct: 228  QRDFLQGKSVQQMVNEALQRVPNKDGDRNIDQVNQIRESLAIMGDNSTAFSLPQPHLQRT 287

Query: 1254 KLCDLKDDELDPSYVAKREQLKYLVASIIRPKVVQAKTLNGKQFVAFLEQILEALNKGEI 1075
            KLCD+KD ELD  YV +REQLK +VASIIRPK+VQ KTLNG++FVAFLEQILEALNKGEI
Sbjct: 288  KLCDMKDGELDSVYVQRREQLKEVVASIIRPKIVQGKTLNGEEFVAFLEQILEALNKGEI 347

Query: 1074 PSTGSLVEVFNKKILERCLKLYSQRMDKLHLPISEQSLQKEHDESRQEAMEAFDEQHFGH 895
            PSTGSLVEVFNK ILERCLKLY + M KL LP+ EQSLQ  H+ SR+EAM+AFDEQHFG 
Sbjct: 348  PSTGSLVEVFNKGILERCLKLYGESMAKLGLPLPEQSLQDAHERSREEAMKAFDEQHFGR 407

Query: 894  HHAKRSVDTLDEEIQKIYKNFILANEYQSSKLCEALYTDCEDKMDHLQVLRLPSMAKFNA 715
            HHAKRSV  LDEEI+K++KN ILANEY+S+KLCEALYT CED+MD LQVLRLPSMAKFNA
Sbjct: 408  HHAKRSVMQLDEEIEKVHKNIILANEYKSAKLCEALYTRCEDRMDQLQVLRLPSMAKFNA 467

Query: 714  GFLQCNQSFEEECVGPSKMRFEQRMLKMMGKSRSLFIKEYNHRLFNWLVAFALVMVVVGR 535
            GFLQCN+SFE ECVGPSK  +EQRM+KMMGKS+SLFIKEYNHRLFNWLVAF+LVMVVVGR
Sbjct: 468  GFLQCNRSFELECVGPSKANYEQRMVKMMGKSKSLFIKEYNHRLFNWLVAFSLVMVVVGR 527

Query: 534  FVIKFILLEIAAWILFIFLETYTRMFWSAESLYYNPVWHFIVASWEMLVYSPILDLDRWA 355
            F+IKFIL+EI AWILFIFLETYTRMFWSAESLYYNPVWHFIVA+WE LVYSPILDLDRWA
Sbjct: 528  FIIKFILIEIGAWILFIFLETYTRMFWSAESLYYNPVWHFIVATWETLVYSPILDLDRWA 587

Query: 354  XXXXXXXXXXXIYWRCCARRRPGSHWVLPLYNSNKGG-SRPRSD 226
                       IYWRC  RR+ GS W+LPLY++ KGG +RPRSD
Sbjct: 588  VPIGFVAAVLVIYWRCYGRRKHGSQWLLPLYSNQKGGPNRPRSD 631


>ref|XP_004162193.1| PREDICTED: guanylate-binding protein 4-like [Cucumis sativus]
          Length = 619

 Score =  700 bits (1806), Expect = 0.0
 Identities = 339/435 (77%), Positives = 379/435 (87%), Gaps = 1/435 (0%)
 Frame = -1

Query: 1527 LSFAVELAEEFYGRVKGQDVAFEPAKLLWLIQRDFLQGKSVQEMVNEALQQVPNYDGDRN 1348
            LSFAVELAEEFYGRVKGQDVAFEPAKLLWLIQRDFLQGK+VQEMVNEAL+ VPN +GD+N
Sbjct: 185  LSFAVELAEEFYGRVKGQDVAFEPAKLLWLIQRDFLQGKTVQEMVNEALRHVPNNEGDKN 244

Query: 1347 IAQVNQIREYLETMGDNSTAFSLPQPHLQRTKLCDLKDDELDPSYVAKREQLKYLVASII 1168
            I  VNQIR+ L  MGDNSTAFSLPQPHLQRTKLCD+KD EL+P+YVAKRE+LK LV SII
Sbjct: 245  IDLVNQIRDSLAIMGDNSTAFSLPQPHLQRTKLCDMKDGELEPTYVAKREELKELVTSII 304

Query: 1167 RPKVVQAKTLNGKQFVAFLEQILEALNKGEIPSTGSLVEVFNKKILERCLKLYSQRMDKL 988
            RPK+VQ K+LNGK+FV+FLEQILEALNKGEIPSTGSLVEVFNK ILERCLK+YS RM K+
Sbjct: 305  RPKIVQGKSLNGKEFVSFLEQILEALNKGEIPSTGSLVEVFNKGILERCLKIYSDRMAKV 364

Query: 987  HLPISEQSLQKEHDESRQEAMEAFDEQHFGHHHAKRSVDTLDEEIQKIYKNFILANEYQS 808
             LPI+EQSL   H+  R EAM AFDEQHFG HHA++SV  LD+EI K++ N ILAN YQS
Sbjct: 365  PLPITEQSLDNAHETHRAEAMRAFDEQHFGRHHARKSVTQLDQEIDKVHSNVILANRYQS 424

Query: 807  SKLCEALYTDCEDKMDHLQVLRLPSMAKFNAGFLQCNQSFEEECVGPSKMRFEQRMLKMM 628
            SKLCEALY  CED+MDHLQ LRLPSMAKFNAGFLQCNQSFEEECVGPSK  +EQRM KM+
Sbjct: 425  SKLCEALYMKCEDEMDHLQALRLPSMAKFNAGFLQCNQSFEEECVGPSKENYEQRMSKML 484

Query: 627  GKSRSLFIKEYNHRLFNWLVAFALVMVVVGRFVIKFILLEIAAWILFIFLETYTRMFWSA 448
            GKSRSLFIKEYNHRL+NWLVAF+L MV+VGRFV+KF L+EI AW+LFIFLE YTRMFWSA
Sbjct: 485  GKSRSLFIKEYNHRLYNWLVAFSLGMVIVGRFVLKFFLVEIGAWLLFIFLEIYTRMFWSA 544

Query: 447  ESLYYNPVWHFIVASWEMLVYSPILDLDRWAXXXXXXXXXXXIYWRCCARRRPGSHWVLP 268
            E+LYY+PVWHF+VA+WE +VYSPILDLDRWA           +YWRCC RR+ GSHW+LP
Sbjct: 545  ETLYYSPVWHFVVATWETIVYSPILDLDRWAIPIGVLAAVLVVYWRCCGRRKYGSHWLLP 604

Query: 267  LYNSNKGGS-RPRSD 226
            LYN+ K GS RPRSD
Sbjct: 605  LYNNPKNGSQRPRSD 619


>ref|XP_004146960.1| PREDICTED: guanylate-binding protein 4-like [Cucumis sativus]
          Length = 626

 Score =  700 bits (1806), Expect = 0.0
 Identities = 339/435 (77%), Positives = 379/435 (87%), Gaps = 1/435 (0%)
 Frame = -1

Query: 1527 LSFAVELAEEFYGRVKGQDVAFEPAKLLWLIQRDFLQGKSVQEMVNEALQQVPNYDGDRN 1348
            LSFAVELAEEFYGRVKGQDVAFEPAKLLWLIQRDFLQGK+VQEMVNEAL+ VPN +GD+N
Sbjct: 192  LSFAVELAEEFYGRVKGQDVAFEPAKLLWLIQRDFLQGKTVQEMVNEALRHVPNNEGDKN 251

Query: 1347 IAQVNQIREYLETMGDNSTAFSLPQPHLQRTKLCDLKDDELDPSYVAKREQLKYLVASII 1168
            I  VNQIR+ L  MGDNSTAFSLPQPHLQRTKLCD+KD EL+P+YVAKRE+LK LV SII
Sbjct: 252  IDLVNQIRDSLAIMGDNSTAFSLPQPHLQRTKLCDMKDGELEPTYVAKREELKELVTSII 311

Query: 1167 RPKVVQAKTLNGKQFVAFLEQILEALNKGEIPSTGSLVEVFNKKILERCLKLYSQRMDKL 988
            RPK+VQ K+LNGK+FV+FLEQILEALNKGEIPSTGSLVEVFNK ILERCLK+YS RM K+
Sbjct: 312  RPKIVQGKSLNGKEFVSFLEQILEALNKGEIPSTGSLVEVFNKGILERCLKIYSDRMAKV 371

Query: 987  HLPISEQSLQKEHDESRQEAMEAFDEQHFGHHHAKRSVDTLDEEIQKIYKNFILANEYQS 808
             LPI+EQSL   H+  R EAM AFDEQHFG HHA++SV  LD+EI K++ N ILAN YQS
Sbjct: 372  PLPITEQSLDNAHETHRAEAMRAFDEQHFGRHHARKSVTQLDQEIDKVHSNVILANRYQS 431

Query: 807  SKLCEALYTDCEDKMDHLQVLRLPSMAKFNAGFLQCNQSFEEECVGPSKMRFEQRMLKMM 628
            SKLCEALY  CED+MDHLQ LRLPSMAKFNAGFLQCNQSFEEECVGPSK  +EQRM KM+
Sbjct: 432  SKLCEALYMKCEDEMDHLQALRLPSMAKFNAGFLQCNQSFEEECVGPSKENYEQRMSKML 491

Query: 627  GKSRSLFIKEYNHRLFNWLVAFALVMVVVGRFVIKFILLEIAAWILFIFLETYTRMFWSA 448
            GKSRSLFIKEYNHRL+NWLVAF+L MV+VGRFV+KF L+EI AW+LFIFLE YTRMFWSA
Sbjct: 492  GKSRSLFIKEYNHRLYNWLVAFSLGMVIVGRFVLKFFLVEIGAWLLFIFLEIYTRMFWSA 551

Query: 447  ESLYYNPVWHFIVASWEMLVYSPILDLDRWAXXXXXXXXXXXIYWRCCARRRPGSHWVLP 268
            E+LYY+PVWHF+VA+WE +VYSPILDLDRWA           +YWRCC RR+ GSHW+LP
Sbjct: 552  ETLYYSPVWHFVVATWETIVYSPILDLDRWAIPIGVLAAVLVVYWRCCGRRKYGSHWLLP 611

Query: 267  LYNSNKGGS-RPRSD 226
            LYN+ K GS RPRSD
Sbjct: 612  LYNNPKNGSQRPRSD 626


Top