BLASTX nr result

ID: Coptis23_contig00023702 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023702
         (1188 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga...    83   5e-31
ref|XP_002467234.1| hypothetical protein SORBIDRAFT_01g021750 [S...    81   8e-28
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga...    76   5e-27
emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga...    70   8e-23
ref|XP_002447531.1| hypothetical protein SORBIDRAFT_06g002845 [S...    74   8e-23

>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1363

 Score = 83.2 bits (204), Expect(2) = 5e-31
 Identities = 41/151 (27%), Positives = 74/151 (49%)
 Frame = +3

Query: 405 KIIVWNGRGAARTAFKNSLSSMISIYHPQIVVVIDTRVTSTCSKRLIEQYGFFNYFIVDP 584
           K I+WN RGA   AF      ++ ++ P ++++++T+ +S  + +  ++ G+ N+ I+  
Sbjct: 2   KAIIWNVRGANSKAFLWHALDLVKMHKPDLLILLETKCSSLRADQATKRLGYVNFRIIPA 61

Query: 585 DGLSGGIWVMWNHNYCDIKCLSMSNRVVHAVVNLHQFNQSALFSGVYMPPQQQNKTNVWQ 764
            G  GGIW+MW  +   +          HA+  L       L +G++ P     +   W 
Sbjct: 62  FGKRGGIWLMWKADIALVHYADYQPNHFHALFKLRSDIPEVLLTGMHAPSVVSERNKYWV 121

Query: 765 ELETVSESVNLPWLLAGYFDCILNQEEKRGG 857
           +L   S     PWL+AG  + +L+  EK GG
Sbjct: 122 DLTEDSPPRGTPWLVAGDMNEVLHGNEKMGG 152



 Score = 79.0 bits (193), Expect(2) = 5e-31
 Identities = 40/92 (43%), Positives = 52/92 (56%)
 Frame = +2

Query: 911  SLTDLGFIGPIHTWSNMRQGPASILERLDRAVCNDHWIHNFPQTSVTHLPAIASDNKPLL 1090
            +L DLGF GP  TW+N R G + I ERLDRA+ N  W+  FP T V HLP   SD+ PLL
Sbjct: 171  ALLDLGFQGPKFTWTNGRTGGSLIKERLDRALVNSEWLDLFPDTKVIHLPRTFSDHCPLL 230

Query: 1091 IDYPGNFSKPRFRFKFLNFWTSYKDFHEFVKK 1186
            I +  N     F F+    W  + DF   +++
Sbjct: 231  ILFNENPRSESFPFRCKEVWAYHPDFTNVIEE 262


>ref|XP_002467234.1| hypothetical protein SORBIDRAFT_01g021750 [Sorghum bicolor]
            gi|241921088|gb|EER94232.1| hypothetical protein
            SORBIDRAFT_01g021750 [Sorghum bicolor]
          Length = 426

 Score = 80.9 bits (198), Expect(2) = 8e-28
 Identities = 39/111 (35%), Positives = 58/111 (52%), Gaps = 3/111 (2%)
 Frame = +2

Query: 863  PSQGQLAELGNFMEN---CSLTDLGFIGPIHTWSNMRQGPASILERLDRAVCNDHWIHNF 1033
            P +  L  + +F ++   C   DLG+ GP +TW+N R       ERLDR + N  W   +
Sbjct: 155  PGRPDLRRINSFCDSVKECGFIDLGYSGPAYTWTNKRFSTTPTFERLDRCLANAEWCMMY 214

Query: 1034 PQTSVTHLPAIASDNKPLLIDYPGNFSKPRFRFKFLNFWTSYKDFHEFVKK 1186
            P+T+V HLP + SD+ P+L     N       F+F N+W   +D+ E  KK
Sbjct: 215  PRTTVYHLPMLRSDHTPILALLDSNTYNNTKPFRFENWWLMEQDYEETAKK 265



 Score = 70.5 bits (171), Expect(2) = 8e-28
 Identities = 41/160 (25%), Positives = 82/160 (51%), Gaps = 5/160 (3%)
 Frame = +3

Query: 408 IIVWNGRGAA---RTAFKNSLSSMISIYHPQIVVVIDTRVTSTCSKRLIEQYGFFNYFIV 578
           ++ WN RG+    R++  N L+ +++    Q+  + +TR ++     LI ++   + FI+
Sbjct: 3   LLSWNCRGSGGSLRSSKMNHLARLLTSTKSQVCFISETRNSTISRTSLINRFNALDAFII 62

Query: 579 DPDGLSGGIWVMWNHNYCDIKCLSMSNRVVHAVVNLHQFNQSALFSGVYMPPQQQNKTNV 758
              G SGG+W++W  ++  +  +  S   + A+ N +  N+      +Y  P   N T++
Sbjct: 63  PAQGQSGGLWLIWKQDF-SLTIVDQSPNYIFALCNNNLDNRQFGLICLYGDPHHHNTTSI 121

Query: 759 WQEL-ETVSESVNLPWLLAGYFDCILNQEEKRG-GLPHLR 872
           W ++ + V  + N+P    G  + I++ +EK G G P LR
Sbjct: 122 WMQVHDFVVANTNMPMFCMGDLNNIMHPDEKSGPGRPDLR 161


>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1378

 Score = 76.3 bits (186), Expect(2) = 5e-27
 Identities = 40/151 (26%), Positives = 73/151 (48%), Gaps = 1/151 (0%)
 Frame = +3

Query: 405 KIIVWNGRGAARTAFKNSLSSMISIYHPQIVVVIDTRVTSTCSKRLIEQYGFFNYFIVDP 584
           KI+VWN +G         L  ++ I +P ++ +++T ++   ++R+ ++ GF     V+ 
Sbjct: 4   KIMVWNVQGVGTKL--TILRELMRINNPTVLALVETHISGDQAQRICDRIGFSGQTRVEA 61

Query: 585 DGLSGGIWVMWNHNYCDIKCLSMSNRVVHAVVNLHQFNQSA-LFSGVYMPPQQQNKTNVW 761
           +G  GGIW+ W     ++      +   H  V + +      LFS +Y  P    +  +W
Sbjct: 62  EGFRGGIWLFWKSE--EVTVTPYGSHSQHLTVEIRRIGDDPWLFSAIYASPDSTLRKELW 119

Query: 762 QELETVSESVNLPWLLAGYFDCILNQEEKRG 854
           +ELE +      PWLLAG F+   +  E+ G
Sbjct: 120 RELEQIKNQYTGPWLLAGDFNETSSLCERNG 150



 Score = 72.4 bits (176), Expect(2) = 5e-27
 Identities = 41/108 (37%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
 Frame = +2

Query: 869  QGQLAELGNFMENCSLTDLGFIGPIHTWSNMRQGPASILERLDRAVCNDHWIHNFPQTSV 1048
            Q +  +  N++EN +L DLGF GP HTWS           RLDR + N  W   F +  V
Sbjct: 157  QRRCKDFANWIENNALIDLGFTGPAHTWSRGLSPTTFKSARLDRGLANSEWKLKFTEGVV 216

Query: 1049 THLPAIASDNKPLLIDYPGNFSKPRF--RFKFLNFWTSYKDFHEFVKK 1186
             +LP   SD+ P+LI   G    PR    F+F   W +++ F EFV+K
Sbjct: 217  RNLPKSQSDHCPILISTSGFAPVPRIIKPFRFQAAWLNHQVFCEFVRK 264


>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1389

 Score = 69.7 bits (169), Expect(2) = 8e-23
 Identities = 41/155 (26%), Positives = 73/155 (47%), Gaps = 3/155 (1%)
 Frame = +3

Query: 408 IIVWNGRGAARTAFKNSLSSMISIYHPQIVVVIDTRVTSTCSKRLIEQYGFFNYFIVDPD 587
           I  WN RG  R       S      + +I+++ +T+  S  S+  +   GF ++  +   
Sbjct: 3   IAFWNVRGGCRKNVMEECSDFCKNNNIKILMLCETKSQSPPSQLAVSAAGFLHHDSIPAM 62

Query: 588 GLSGGIWVMWNH---NYCDIKCLSMSNRVVHAVVNLHQFNQSALFSGVYMPPQQQNKTNV 758
           G SGG+W+ W     N   +  +  S R +   +NL   N   +   +Y P Q++ K++ 
Sbjct: 63  GYSGGLWLFWRDCILNPFSLVVIYKSVRFIACSINLLNQNLQFVAIFIYAPAQKEFKSSF 122

Query: 759 WQELETVSESVNLPWLLAGYFDCILNQEEKRGGLP 863
           W EL     S++ P+++ G F+ I +  +K GG P
Sbjct: 123 WDELIAYVSSLSFPFIILGDFNEINSPSDKLGGAP 157



 Score = 64.7 bits (156), Expect(2) = 8e-23
 Identities = 31/98 (31%), Positives = 47/98 (47%)
 Frame = +2

Query: 893  NFMENCSLTDLGFIGPIHTWSNMRQGPASILERLDRAVCNDHWIHNFPQTSVTHLPAIAS 1072
            N       T++ F G I TW   + GP +I ERLDR V +  W+  FP   + H    +S
Sbjct: 168  NLFSQVDCTEISFTGQIFTWRKKKDGPNNIHERLDRGVASTSWLMLFPHAFLKHHIFTSS 227

Query: 1073 DNKPLLIDYPGNFSKPRFRFKFLNFWTSYKDFHEFVKK 1186
            D+  + ++Y  N       F+F   W + KD+   VK+
Sbjct: 228  DHCQISLEYLANNKSKAPPFRFEKMWCTRKDYDSLVKR 265


>ref|XP_002447531.1| hypothetical protein SORBIDRAFT_06g002845 [Sorghum bicolor]
            gi|241938714|gb|EES11859.1| hypothetical protein
            SORBIDRAFT_06g002845 [Sorghum bicolor]
          Length = 993

 Score = 73.9 bits (180), Expect(2) = 8e-23
 Identities = 35/100 (35%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
 Frame = +2

Query: 893  NFMENCSLTDLGFIGPIHTWSNMRQGPASILERLDRAVCNDHWIHNFPQTSVTHLPAIAS 1072
            ++++ C   DLG+ GP +TW+N R       +RLDR + N  W   +P+T+V HLP   S
Sbjct: 194  DYVKQCGFLDLGYSGPAYTWTNKRFSTTPTFQRLDRCLANAEWCMAYPRTTVYHLPMRRS 253

Query: 1073 DNKPLL--IDYPGNFSKPRFRFKFLNFWTSYKDFHEFVKK 1186
            D+ P+L  +D   + +   FRFK  N+W   +D+ +  K+
Sbjct: 254  DHAPILTMLDSTRHHNNKIFRFK--NWWLMEQDYMQVAKE 291



 Score = 60.5 bits (145), Expect(2) = 8e-23
 Identities = 38/153 (24%), Positives = 72/153 (47%), Gaps = 4/153 (2%)
 Frame = +3

Query: 408 IIVWNGRGAA---RTAFKNSLSSMISIYHPQIVVVIDTRVTSTCSKRLIEQYGFFNYFIV 578
           ++ WN +G+A   R++    L+ +I+    Q+  + +TR TS     ++ ++   + F+V
Sbjct: 29  LLSWNCQGSAGSLRSSTMQHLARLITSTKSQVCFISETRNTSISRTAIVNRFNVLDAFVV 88

Query: 579 DPDGLSGGIWVMWNHNYCDIKCLSMSNRVVHAVVNLHQFNQSALFSGVYMPPQQQNKTNV 758
              G SGG+W++W      I  +  +   + A+ N    ++      +Y  P  +N T +
Sbjct: 89  QAQGQSGGLWLIWT-QAVSITIIDHNYHYILALCNSTTTSEQFGLVCIYGDPHHRNTTTI 147

Query: 759 W-QELETVSESVNLPWLLAGYFDCILNQEEKRG 854
           W + L  V     LP L  G  + ++N  EK G
Sbjct: 148 WTRVLNFVVNHSTLPILAMGDMNELMNANEKCG 180


Top