BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023699
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]   104   7e-21
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    95   7e-18
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    94   2e-17
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]    89   5e-16

>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score =  104 bits (260), Expect = 7e-21
 Identities = 69/181 (38%), Positives = 102/181 (56%), Gaps = 6/181 (3%)
 Frame = -1

Query: 527  KAIVSMAPSSSTAEEQILVLIIYGGYKRLASARPGDTTWSIMLNNMIQFD-VLHLNGQFY 351
            KA++S APSS        V+IIY  Y RLA  +PG  TW+++ +     D +++ NG F 
Sbjct: 1065 KAVLSSAPSSPDCA----VMIIYSDYGRLAFTKPGHQTWTLLESESGPVDDIIYFNGSFL 1120

Query: 350  AVDAYGNVRLCDTNGLRPVSDVFAHPP--EDVQGID--RFYLVELRGELHLVARIL-DFK 186
            AV+    V +CD +G +  +  FA  P  +DV  I+    YLVE  GE+++V R L D  
Sbjct: 1121 AVNLSWEVWICDISGSQLKTIRFAAAPALQDVDEIEYEAKYLVESGGEIYMVTRNLYDTA 1180

Query: 185  PVSPPMEFHHYVKTVYFQVYKLDLCTRKWDELQTLDGHAIFIGSNSSFSLKASGYPGCKP 6
                P     Y++T  F V KLD+C ++W+E++ LD  + F+G+N SFS  AS YP  + 
Sbjct: 1181 RRDIP-----YMRTWTFSVLKLDMCNKRWEEVENLDHCSFFLGNNHSFSTWASDYPEFRK 1235

Query: 5    N 3
            N
Sbjct: 1236 N 1236


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 62/170 (36%), Positives = 87/170 (51%), Gaps = 3/170 (1%)
 Frame = -1

Query: 503 SSSTAEEQILVLIIYGGYKRLASARPGDTTWSIMLN-NMIQFDVLHLNGQFYAVDAYGNV 327
           SS   +   +V+ I      LA  R GD +WS++ N      DV+ +NG FYAV+  G +
Sbjct: 172 SSPLKDNNFVVIAILNQTDDLAYCRNGDKSWSLVENARSFCEDVIFVNGMFYAVNKAGQI 231

Query: 326 RLCDTNGLRPVSDVFAHPPEDVQGIDRFYLVELRGELHLVARILD--FKPVSPPMEFHHY 153
            +CD +   P       P +   G D  YLV    EL LV R LD  ++   P ME H  
Sbjct: 232 VICDISSDSPRVSFMETPRQ--AGGDMQYLVNSGDELLLVTRYLDLEYEFDHPDMEPHLI 289

Query: 152 VKTVYFQVYKLDLCTRKWDELQTLDGHAIFIGSNSSFSLKASGYPGCKPN 3
            +T+ F+V++LD    +W  + TL   A+FIG NSS SL A+ + GC  N
Sbjct: 290 YRTIRFEVFRLDWNGPQWLRMSTLGDKALFIGENSSLSLSATDFSGCMGN 339


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 59/176 (33%), Positives = 90/176 (51%), Gaps = 1/176 (0%)
 Frame = -1

Query: 527 KAIVSMAPSSSTAEEQILVLIIYGGYKRLASARPGDTTWSIMLN-NMIQFDVLHLNGQFY 351
           K I+S +P++ +     + ++I      LA  R  D +W+ + +      DV+   G FY
Sbjct: 164 KTILSSSPANGS---DFIAVVILNQTGDLALCRKSDDSWTFLEDAQSYAEDVIFHRGLFY 220

Query: 350 AVDAYGNVRLCDTNGLRPVSDVFAHPPEDVQGIDRFYLVELRGELHLVARILDFKPVSPP 171
           AV+ YG++ +CD +G  P   +   P +   G D  YLVE   EL LV R LD      P
Sbjct: 221 AVNKYGSIAVCDVSGSSPRVSIIEMPQQF--GGDLQYLVESGEELLLVTRYLDLTYDVEP 278

Query: 170 MEFHHYVKTVYFQVYKLDLCTRKWDELQTLDGHAIFIGSNSSFSLKASGYPGCKPN 3
            +     +T  FQV +LDL   +W+ + +L   A+F+G N S SL +  +PGCK N
Sbjct: 279 DQTSLIYRTTRFQVCRLDLKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGN 334


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 62/174 (35%), Positives = 90/174 (51%), Gaps = 2/174 (1%)
 Frame = -1

Query: 527 KAIVSMAPSSSTAEEQILVLIIYGGYKRLASARPGDTTWSIMLNNM-IQFDVLHLNGQFY 351
           K ++S +P     +  + + I+      LA  + GD  W+I+ N+     DV++ NG FY
Sbjct: 166 KVVMSSSPLEKKGDFFVAMAILCSTGD-LAYCKNGDECWNIVENSRSFSEDVIYFNGLFY 224

Query: 350 AVDAYGNVRLCDTNGLRPVSDVFAHPPEDVQGIDRFYLVELRGELHLVARILDFKPVSPP 171
           AV+  G + +CD NG  P    F   P  + G D  YLV     L LV R LD       
Sbjct: 225 AVNKAGQIVVCDVNGNSPKVS-FIETPRQIGG-DMQYLVSSGDGLLLVTRYLDLD----- 277

Query: 170 MEFHHYV-KTVYFQVYKLDLCTRKWDELQTLDGHAIFIGSNSSFSLKASGYPGC 12
           +EF  ++ KT  F+V+KLDL   +W+ + +L    +FIG NSS +L ASG  GC
Sbjct: 278 VEFDIFIYKTARFEVFKLDLNGPRWERVTSLGDMMLFIGENSSLALSASGLSGC 331


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 57/176 (32%), Positives = 88/176 (50%), Gaps = 1/176 (0%)
 Frame = -1

Query: 527 KAIVSMAPSSSTAEEQILVLIIYGGYKRLASARPGDTTWSIMLN-NMIQFDVLHLNGQFY 351
           K I+S +P++ +     + ++I      LA  R  D +W+ + +      DV+   G FY
Sbjct: 164 KTILSSSPANGS---DFIAVVILNQTGDLALCRKSDDSWTFLEDAQSYSEDVIFHRGLFY 220

Query: 350 AVDAYGNVRLCDTNGLRPVSDVFAHPPEDVQGIDRFYLVELRGELHLVARILDFKPVSPP 171
           AV+ YG++ +CD +G  P   +   P +   G D  YLVE   EL LV R LD       
Sbjct: 221 AVNKYGSIAVCDVSGSSPRVSIIEMPQQF--GGDLQYLVESGEELLLVTRYLDLTYDVEX 278

Query: 170 MEFHHYVKTVYFQVYKLDLCTRKWDELQTLDGHAIFIGSNSSFSLKASGYPGCKPN 3
            +     +T  FQV +LD    +W+ + +L   A+F+G N S SL +  +PGCK N
Sbjct: 279 DQTSLIYRTTRFQVCRLDSKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGN 334