BLASTX nr result

ID: Coptis23_contig00023688 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023688
         (466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270286.2| PREDICTED: auxin response factor 23-like [Vi...   100   2e-19
emb|CBI32272.3| unnamed protein product [Vitis vinifera]              100   2e-19
ref|XP_004138020.1| PREDICTED: auxin response factor 2-like [Cuc...    86   3e-15
ref|XP_002520691.1| transcription factor, putative [Ricinus comm...    81   8e-14
gb|AAP06759.1| auxin response factor-like protein [Mangifera ind...    81   8e-14

>ref|XP_002270286.2| PREDICTED: auxin response factor 23-like [Vitis vinifera]
          Length = 801

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 59/125 (47%), Positives = 81/125 (64%), Gaps = 2/125 (1%)
 Frame = -3

Query: 371 IFGVDLVKSRLK-SAPCVIASTKNQRRCPVTPLTSQLGLAESDKLLELKKTINHSGYSGS 195
           +FGV+L+ S  +  +P V +S++ Q  C + P TSQ  ++ES +  E  K++     SG 
Sbjct: 639 LFGVNLINSPAELPSPQVASSSELQSPCSIPP-TSQSSISESIQASEPSKSV-----SGD 692

Query: 194 QYEDKCKNNLFA-ARSCTKVHRYGTALGRSVNLMRFNGYDELLNELDLMFDFGGKLMGRS 18
             + +CKN      RSCTKV +YGTALGRS++L RF+GYDEL+ ELD MFDFGG LM  S
Sbjct: 693 LSDKQCKNCCSVMVRSCTKVLKYGTALGRSIDLARFDGYDELIIELDQMFDFGGSLMDGS 752

Query: 17  TGWNV 3
             W+V
Sbjct: 753 CRWHV 757


>emb|CBI32272.3| unnamed protein product [Vitis vinifera]
          Length = 696

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 59/125 (47%), Positives = 81/125 (64%), Gaps = 2/125 (1%)
 Frame = -3

Query: 371 IFGVDLVKSRLK-SAPCVIASTKNQRRCPVTPLTSQLGLAESDKLLELKKTINHSGYSGS 195
           +FGV+L+ S  +  +P V +S++ Q  C + P TSQ  ++ES +  E  K++     SG 
Sbjct: 534 LFGVNLINSPAELPSPQVASSSELQSPCSIPP-TSQSSISESIQASEPSKSV-----SGD 587

Query: 194 QYEDKCKNNLFA-ARSCTKVHRYGTALGRSVNLMRFNGYDELLNELDLMFDFGGKLMGRS 18
             + +CKN      RSCTKV +YGTALGRS++L RF+GYDEL+ ELD MFDFGG LM  S
Sbjct: 588 LSDKQCKNCCSVMVRSCTKVLKYGTALGRSIDLARFDGYDELIIELDQMFDFGGSLMDGS 647

Query: 17  TGWNV 3
             W+V
Sbjct: 648 CRWHV 652


>ref|XP_004138020.1| PREDICTED: auxin response factor 2-like [Cucumis sativus]
          Length = 839

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 51/138 (36%), Positives = 76/138 (55%), Gaps = 6/138 (4%)
 Frame = -3

Query: 404  VTQPKGSSTCIIFGVDLVKSRLKSAPCVIASTKNQRRCPVTPLTSQLGLAESD------K 243
            + +PK  + C +FG+ LVK+     P  +          + P   Q+  +ES       +
Sbjct: 628  ILKPKDGN-CKLFGISLVKNPAIPDPVGLNRNMMNEADVMHPNVHQIHSSESGLKSELPR 686

Query: 242  LLELKKTINHSGYSGSQYEDKCKNNLFAARSCTKVHRYGTALGRSVNLMRFNGYDELLNE 63
            +L+L K++  S     + +  CK+   +ARSCTKVH+ G ALGRSV+L RFN YDEL+ E
Sbjct: 687  VLKLDKSVAIS--EADKLQQTCKSQGTSARSCTKVHKQGIALGRSVDLSRFNNYDELVAE 744

Query: 62   LDLMFDFGGKLMGRSTGW 9
            LD +F+FGG+L      W
Sbjct: 745  LDQLFEFGGELQAPKKNW 762


>ref|XP_002520691.1| transcription factor, putative [Ricinus communis]
           gi|223540076|gb|EEF41653.1| transcription factor,
           putative [Ricinus communis]
          Length = 634

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 55/132 (41%), Positives = 74/132 (56%), Gaps = 1/132 (0%)
 Frame = -3

Query: 395 PKGSSTCIIFGVDLVKSRLKSAPCVIASTKNQRRCPVTPLT-SQLGLAESDKLLELKKTI 219
           P G    ++FGVDLVKS L   P   A+T +      + L  SQ  +AE  K        
Sbjct: 480 PNGGGRYMLFGVDLVKS-LPELPSPQAATYSDHESLYSVLPISQSSVAEPSKCTSATN-- 536

Query: 218 NHSGYSGSQYEDKCKNNLFAARSCTKVHRYGTALGRSVNLMRFNGYDELLNELDLMFDFG 39
                SGSQ ++ C    F   SCTKV ++G+A GRSV++ +F+GYD+L+ ELD MFDF 
Sbjct: 537 -----SGSQCKNCCS---FTNLSCTKVLKHGSA-GRSVDITKFDGYDKLIRELDQMFDFK 587

Query: 38  GKLMGRSTGWNV 3
           G L+  S+GW V
Sbjct: 588 GTLIDGSSGWEV 599


>gb|AAP06759.1| auxin response factor-like protein [Mangifera indica]
          Length = 840

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 51/137 (37%), Positives = 72/137 (52%), Gaps = 14/137 (10%)
 Frame = -3

Query: 377  CIIFGVDLVKSRLKSAPCVIASTKNQRRCPVTPLTSQLGLAESDKLLELKKT-------- 222
            C +FG+ LV S   + P  I   +N    PV  +  QLG+ ESD   E  K+        
Sbjct: 627  CKLFGIPLVSSSCVT-PEPILLHQNSMNEPVGHMNHQLGVLESDPKSEQSKSPTLANDSN 685

Query: 221  -INHSGYSGSQYEDKCKN-----NLFAARSCTKVHRYGTALGRSVNLMRFNGYDELLNEL 60
             ++  G      +   K+        ++RSCTKVH+ G ALGRSV+L +FN Y+EL+ EL
Sbjct: 686  CVSEQGKPSQTCQPHVKDVHSKPQSGSSRSCTKVHKQGIALGRSVDLSKFNNYEELIAEL 745

Query: 59   DLMFDFGGKLMGRSTGW 9
            D +F+FGG+LM     W
Sbjct: 746  DRLFEFGGELMTPKKNW 762


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