BLASTX nr result

ID: Coptis23_contig00023669 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023669
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK95158.1| unknown [Populus trichocarpa]                           96   4e-18
ref|XP_002528691.1| conserved hypothetical protein [Ricinus comm...    82   5e-14
emb|CBI18034.3| unnamed protein product [Vitis vinifera]               79   3e-13
ref|XP_002280623.1| PREDICTED: uncharacterized protein LOC100251...    79   3e-13
ref|XP_003533658.1| PREDICTED: uncharacterized protein LOC100814...    75   4e-12

>gb|ABK95158.1| unknown [Populus trichocarpa]
          Length = 350

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 52/115 (45%), Positives = 72/115 (62%), Gaps = 1/115 (0%)
 Frame = +3

Query: 3   TACVKRYETGSQDLMILIQNDGETELNVSVISVE-VSTKLVDIQQHQAKKINASTTVGKA 179
           +AC+  ++  SQ  ++LIQN GE +L+V V +   V   LV++ +HQ KKI    TVG+ 
Sbjct: 153 SACILGFDNESQRWIVLIQNSGERDLSVDVHAPNSVDNSLVELGKHQTKKI--ILTVGEN 210

Query: 180 QKITLNTNPGGCVLNTGVLVSEGNFFQRIPSYANLVTPTYGAYFIILVALVVGGT 344
            ++ LN   G CVL+   L S GNFF   PSY  L+TP  GAYF+I+ A+V GGT
Sbjct: 211 TEVILNAKNGECVLHLDPLESHGNFFLHFPSYDQLITPINGAYFLIVTAVVFGGT 265


>ref|XP_002528691.1| conserved hypothetical protein [Ricinus communis]
           gi|223531863|gb|EEF33680.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 329

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 44/114 (38%), Positives = 67/114 (58%), Gaps = 2/114 (1%)
 Frame = +3

Query: 6   ACVKRYETGSQDLMILIQNDGETELNVSVISV--EVSTKLVDIQQHQAKKINASTTVGKA 179
           AC+   +   +  +IL+QN+GE+ L V + +   + ST    + +HQ  KIN S  VG +
Sbjct: 131 ACILNSDPEYKKFVILVQNEGESNLKVDISAPNPDESTSFA-MTKHQTSKINLS--VGDS 187

Query: 180 QKITLNTNPGGCVLNTGVLVSEGNFFQRIPSYANLVTPTYGAYFIILVALVVGG 341
            ++      G CVL+T + VS+GN F  +PSY  L+TP  GAYF+I+  L+ GG
Sbjct: 188 NQVIFKAGNGECVLHTDIPVSQGNIFFNLPSYDRLITPINGAYFLIVTVLIFGG 241


>emb|CBI18034.3| unnamed protein product [Vitis vinifera]
          Length = 320

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 47/114 (41%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
 Frame = +3

Query: 6   ACVKRYETGSQDLMILIQNDGETELNVSVI---SVEVSTKLVDIQQHQAKKINASTTVGK 176
           AC++ +E GS+ L  ++QN+GE  L V++    SV+ + +++ I +HQ + +N  +T   
Sbjct: 126 ACIQSFENGSKAL--IVQNEGENTLKVNLTVSDSVKDALEVLVIPKHQTRSMNILST--G 181

Query: 177 AQKITLNTNPGGCVLNTGVLVSEGNFFQRIPSYANLVTPTYGAYFIILVALVVG 338
           + K+ LN     CV     L+SEGNFFQ +P ++ LVTP YG YF+ L ALVVG
Sbjct: 182 SSKLVLNAGNKDCVFENH-LISEGNFFQWLP-HSELVTPIYGVYFLFLTALVVG 233


>ref|XP_002280623.1| PREDICTED: uncharacterized protein LOC100251828 [Vitis vinifera]
           gi|297736482|emb|CBI25353.3| unnamed protein product
           [Vitis vinifera]
          Length = 305

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 50/122 (40%), Positives = 67/122 (54%), Gaps = 8/122 (6%)
 Frame = +3

Query: 3   TACVKRYETGSQDLMILIQNDGETELNVSVISVEVSTKLVDIQ-------QHQAKKINAS 161
           TACV        +L +L+ NDGE  L V V    V + L DIQ       +HQ KKIN S
Sbjct: 102 TACVFHPANAPMELFLLVNNDGEGTLEVDVTISPVDSTLKDIQIPKIQIPKHQMKKINVS 161

Query: 162 TTVGKAQKITLNTNPGGCVLNTGVLVSEG-NFFQRIPSYANLVTPTYGAYFIILVALVVG 338
              G +  I LN   G C+++ G    +  NFF++ P+YAN VTP +G Y + L AL++G
Sbjct: 162 EYAG-SPLIALN---GDCLIHMGSPPQKDTNFFKQFPAYANQVTPIHGVYLLSLTALLIG 217

Query: 339 GT 344
           GT
Sbjct: 218 GT 219


>ref|XP_003533658.1| PREDICTED: uncharacterized protein LOC100814077 [Glycine max]
          Length = 342

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 40/115 (34%), Positives = 69/115 (60%), Gaps = 2/115 (1%)
 Frame = +3

Query: 6   ACVKRYETGSQDLMILIQNDGETELNVSVISVEVSTKLVDIQQHQAK--KINASTTVGKA 179
           AC+ + +   + L++L+ N G+  + V  +  +    L D++ H++K  K+N + +  K+
Sbjct: 148 ACISKIDP--KYLVVLLHNGGDGIIIVK-LRTDFDNNLGDVEVHKSKTEKVNITQSSSKS 204

Query: 180 QKITLNTNPGGCVLNTGVLVSEGNFFQRIPSYANLVTPTYGAYFIILVALVVGGT 344
            ++TLN   G CVL+    + + NF  R+PSY  ++TP  GAYF+IL+ LV GGT
Sbjct: 205 TQLTLNAGKGDCVLHMVSNIPDENFILRLPSYDKILTPVNGAYFLILMVLVFGGT 259


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