BLASTX nr result

ID: Coptis23_contig00023657 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023657
         (741 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003571430.1| PREDICTED: uncharacterized protein LOC100839...   111   2e-22
dbj|BAK01761.1| predicted protein [Hordeum vulgare subsp. vulgare]    108   1e-21
ref|NP_001064234.2| Os10g0170600 [Oryza sativa Japonica Group] g...   104   2e-20
ref|NP_001042787.2| Os01g0290300 [Oryza sativa Japonica Group] g...   100   4e-19
ref|XP_002436735.1| hypothetical protein SORBIDRAFT_10g007815 [S...    99   1e-18

>ref|XP_003571430.1| PREDICTED: uncharacterized protein LOC100839006 [Brachypodium
           distachyon]
          Length = 959

 Score =  111 bits (277), Expect = 2e-22
 Identities = 72/202 (35%), Positives = 108/202 (53%), Gaps = 17/202 (8%)
 Frame = -3

Query: 556 MASNYVPPSTASSVIDAENVINVSGDDGTDHVES-----TKTTNKRKTSIAWEDFSEVTE 392
           M+ + +  S A+  ++ E V+++S +DG            KTT  ++ S  W  F ++  
Sbjct: 356 MSEDGIGGSEAADEVEQE-VVDLSSEDGKKKKRKGRCGGVKTTKSKELSKCWLYFKKIMV 414

Query: 391 DG-------RKKAKCNHCFKKLVVVTGSTTS-LLRHQKTCVIRKTSKSGKGPKQQLLGYD 236
                      KA+C +C   L    GS+TS LLRH+++C   K +      + +L    
Sbjct: 415 PSVDDPNVEEMKARCRYCANLLTYHQGSSTSHLLRHKRSCTAIKANLQRLSIQSRLEFQP 474

Query: 235 ANESGSLA----TYKFDKKLIKEIIAKMIMVHEYPFRMVEHEFFLLLCHMLNPRFEMVGR 68
            + S  L     T  FD+  +KE+IAKMI  H+Y FRMVEHE+F +L   +NP ++ +GR
Sbjct: 475 ISGSSGLPLQVPTNGFDQATVKELIAKMIAAHDYSFRMVEHEWFNVLMKYMNPLYKQIGR 534

Query: 67  KAIRAECIRVYECEKVRLKKVL 2
           KAIRAEC+RVY+ EK  LK  L
Sbjct: 535 KAIRAECLRVYKDEKEILKAEL 556


>dbj|BAK01761.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 286

 Score =  108 bits (270), Expect = 1e-21
 Identities = 66/157 (42%), Positives = 87/157 (55%), Gaps = 12/157 (7%)
 Frame = -3

Query: 436 RKTSIAWEDFSEVTEDGRK-------KAKCNHCFKKLVVVTGSTTSLL-RHQKTCVIRKT 281
           R  S  W  F +V E   K       KA CN+C  K     G +TS + RH   C+  K 
Sbjct: 29  RAISDVWAHFHKVKEPSLKNLGQIVLKACCNYCPNKYAYEKGGSTSTIGRHHLKCLNYKA 88

Query: 280 SKSGKGPKQQLLGYDANESGSLATYK----FDKKLIKEIIAKMIMVHEYPFRMVEHEFFL 113
             +    +  L     N + S+ T      +D+ +IKE+IAKMI VHEY FRMVEHE+F 
Sbjct: 89  KMARAAIQTTLELRKTNGTSSVPTMSPSIDYDQGIIKELIAKMICVHEYSFRMVEHEWFN 148

Query: 112 LLCHMLNPRFEMVGRKAIRAECIRVYECEKVRLKKVL 2
           +L   +NP ++ +GRKAIRAEC+RVY+ EK  LK VL
Sbjct: 149 ILMKCMNPNYKSIGRKAIRAECLRVYKKEKEVLKSVL 185


>ref|NP_001064234.2| Os10g0170600 [Oryza sativa Japonica Group]
           gi|21671885|gb|AAM74247.1|AC074355_9 Putative
           transposable element [Oryza sativa Japonica Group]
           gi|31430424|gb|AAP52341.1| hAT family dimerisation
           domain containing protein [Oryza sativa Japonica Group]
           gi|255679241|dbj|BAF26148.2| Os10g0170600 [Oryza sativa
           Japonica Group]
          Length = 772

 Score =  104 bits (259), Expect = 2e-20
 Identities = 71/184 (38%), Positives = 97/184 (52%), Gaps = 3/184 (1%)
 Frame = -3

Query: 559 QMASNYVPPSTASSVIDAENVINVSGDDGTDHVESTKTTNKRKTSIAWEDFSEVTEDGRK 380
           Q  S  +PP  A SV D+E  I V  D+  D  E+  T  K  TS+ W+DF +V   G  
Sbjct: 98  QQESQSLPPQ-AESVNDSEP-IQVEDDEPEDDSENFGTKRKL-TSVVWKDFKKVKVCGDV 154

Query: 379 KAKCNHCFKKLVVVTGSTTSLLR-HQKTCVIRKTSKSGKGPKQQLLGYDANESG--SLAT 209
           KA+C HC K+L   + + TS L  H K C +RK     K   Q  L +++ E G  S+ T
Sbjct: 155 KAECLHCHKRLGGKSSNGTSHLHDHLKICTLRKIKMGPKTLAQSSLRFNSIEGGKVSVDT 214

Query: 208 YKFDKKLIKEIIAKMIMVHEYPFRMVEHEFFLLLCHMLNPRFEMVGRKAIRAECIRVYEC 29
           Y FD  + +  +A MI++HEYP  +V+H  F      L P F+MV R  IR + +  YE 
Sbjct: 215 YTFDPAVARRELAAMIILHEYPLSIVDHIGFRRFVSALQPLFKMVTRNTIRKDIMDTYEE 274

Query: 28  EKVR 17
           EK R
Sbjct: 275 EKKR 278


>ref|NP_001042787.2| Os01g0290300 [Oryza sativa Japonica Group]
           gi|255673131|dbj|BAF04701.2| Os01g0290300 [Oryza sativa
           Japonica Group]
          Length = 751

 Score =  100 bits (248), Expect = 4e-19
 Identities = 64/184 (34%), Positives = 94/184 (51%), Gaps = 24/184 (13%)
 Frame = -3

Query: 481 DDGTDHVESTKTTNKR--------------KTSIAWEDFSEVTEDGRK-------KAKCN 365
           DDG    +  KT  K+              K +  W+ F  +    +K       KAKC 
Sbjct: 83  DDGGSKAKKAKTGGKKAGVTVSPKCKIARGKRAECWKHFKVINVPSKKERGVMVAKAKCK 142

Query: 364 HCFKKLVVVTG-STTSLLRHQKTCVIRKTSKSGKGPKQQLLGYDANESGSLATY--KFDK 194
            C +  V   G +TT+L RH   C  +  +K  K   Q  L +   +  SL     +++ 
Sbjct: 143 FCHRSYVYHPGGATTTLNRHLAGCT-QYQNKLTKAKAQGTLNFGPEDDNSLIVNPTEYNH 201

Query: 193 KLIKEIIAKMIMVHEYPFRMVEHEFFLLLCHMLNPRFEMVGRKAIRAECIRVYECEKVRL 14
           +  +E+IAKMI+ HEY FRMVEH++F +L   +N  +E +GRK+I+ EC+RVYE EK +L
Sbjct: 202 EHTRELIAKMIIAHEYSFRMVEHKWFNILMKWMNGNYEFIGRKSIKNECMRVYESEKNQL 261

Query: 13  KKVL 2
           KK L
Sbjct: 262 KKSL 265


>ref|XP_002436735.1| hypothetical protein SORBIDRAFT_10g007815 [Sorghum bicolor]
           gi|241914958|gb|EER88102.1| hypothetical protein
           SORBIDRAFT_10g007815 [Sorghum bicolor]
          Length = 307

 Score = 98.6 bits (244), Expect = 1e-18
 Identities = 61/167 (36%), Positives = 88/167 (52%), Gaps = 12/167 (7%)
 Frame = -3

Query: 466 HVESTKTTNKR-KTSIAWEDFSEVTEDGRK-------KAKCNHCFKKLVVVTGSTTSLLR 311
           H+  +K   KR K +  W+ F E+     K       K KC  C K      G  TS L 
Sbjct: 61  HLSPSKVKVKRGKRAGCWKYFKEINVQSNKEFGVMVTKVKCRFCHKSYAYQQGGATSQLN 120

Query: 310 HQKTCVIRKTSKSGKGPK---QQLLGYDANESGSLAT-YKFDKKLIKEIIAKMIMVHEYP 143
           H  +   +  +K  K  +   Q  L Y A++   +    ++D +  K++IAKMI+VHEY 
Sbjct: 121 HHLSRCTQFQNKLAKAKRILAQGTLNYVADDGCLVINPTEYDHEHTKKLIAKMIIVHEYS 180

Query: 142 FRMVEHEFFLLLCHMLNPRFEMVGRKAIRAECIRVYECEKVRLKKVL 2
           FRMVEH++F +L   +N  +E +GRK I+ EC++VYE EK  LKK L
Sbjct: 181 FRMVEHKWFNILMKWMNSNYESIGRKTIKNECMKVYESEKELLKKNL 227


Top