BLASTX nr result

ID: Coptis23_contig00023643 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023643
         (1131 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282103.1| PREDICTED: uncharacterized protein LOC100252...   421   e-115
emb|CAN71659.1| hypothetical protein VITISV_016184 [Vitis vinifera]   420   e-115
ref|XP_002525436.1| conserved hypothetical protein [Ricinus comm...   409   e-112
ref|XP_002325834.1| predicted protein [Populus trichocarpa] gi|2...   387   e-105
ref|XP_003548753.1| PREDICTED: uncharacterized protein LOC100805...   384   e-104

>ref|XP_002282103.1| PREDICTED: uncharacterized protein LOC100252010 [Vitis vinifera]
           gi|297739753|emb|CBI29935.3| unnamed protein product
           [Vitis vinifera]
          Length = 355

 Score =  421 bits (1083), Expect = e-115
 Identities = 213/322 (66%), Positives = 248/322 (77%), Gaps = 6/322 (1%)
 Frame = -1

Query: 972 LDEKFGRKGIKFTDSGNV---EMTVRNGSSLSLQISNGHVTSYKPKVYWQDDEFEEVLYT 802
           LD+KFGRKGIKF +SGNV   E+TVRNGSSL L+I +G VTSYKPKV W+DD FEEVLYT
Sbjct: 35  LDQKFGRKGIKFLESGNVPLVELTVRNGSSLRLRIPDGLVTSYKPKVNWKDDGFEEVLYT 94

Query: 801 VPGELDSM---KGGIGLVLNEVSETNSKGTPVCTXXXXXXXXXXXXXDALQVELNCTCGT 631
           +P         KGGIGLV+N+VS+  SK +P+ T              ALQVEL+CT GT
Sbjct: 95  LPAAASDSTKPKGGIGLVINDVSDPASKLSPLSTEWAVKDVDSDAID-ALQVELSCTSGT 153

Query: 630 LDVTYIVTLYPLSMATAVIVKNNGKKAVNLTSAMLSYLKFKGRGGSAIRGFKGCSYCIHP 451
           LD+TY+V+LYP SMATAV+V NNG+K V+LTSAMLS+ KFK RGG+A++G KGCSYC HP
Sbjct: 154 LDITYVVSLYPESMATAVLVNNNGRKPVSLTSAMLSHFKFKRRGGAAVQGLKGCSYCSHP 213

Query: 450 PLSSRFELLSPVEAMKPEPLGWFSFSEPENVKPGSWTTEKQLYTVLKNKMSRVYTAPPME 271
           PLSS FE+LSP EAMK E  GWFSF      K GSWT +   Y +LKNK+SRVYT PP E
Sbjct: 214 PLSSPFEILSPAEAMKTESPGWFSFDSESEKKRGSWTVQDDPYIILKNKLSRVYTTPPTE 273

Query: 270 RLKRIYRTPPSKYETIDQWKGLEYRLIRMGYEDIYLSSPGSSSQKFGDGYFICTGPASML 91
           RLK  Y TPPSKYETIDQ + L +R+IR+GYEDIYLSSPGS S+K+G  YFICTGPAS+L
Sbjct: 274 RLKEFYDTPPSKYETIDQGRELFFRVIRIGYEDIYLSSPGSLSEKYGKDYFICTGPASIL 333

Query: 90  VPVIVNPGEDWRGAQVIEHDNL 25
           VPV+VNPGE WR AQVIEHDNL
Sbjct: 334 VPVVVNPGEGWRAAQVIEHDNL 355


>emb|CAN71659.1| hypothetical protein VITISV_016184 [Vitis vinifera]
          Length = 754

 Score =  420 bits (1079), Expect = e-115
 Identities = 213/321 (66%), Positives = 247/321 (76%), Gaps = 6/321 (1%)
 Frame = -1

Query: 972  LDEKFGRKGIKFTDSGNV---EMTVRNGSSLSLQISNGHVTSYKPKVYWQDDEFEEVLYT 802
            LD+KFGRKGIKF +SGNV   E+TVRNGSSL L+I +G VTSYKPKV W+DD FEEVLYT
Sbjct: 84   LDQKFGRKGIKFLESGNVPLVELTVRNGSSLRLRIPDGLVTSYKPKVNWKDDGFEEVLYT 143

Query: 801  VPGELDSM---KGGIGLVLNEVSETNSKGTPVCTXXXXXXXXXXXXXDALQVELNCTCGT 631
            +P         KGGIGLV+N+VS+  SK +P+ T              ALQVEL+CT GT
Sbjct: 144  LPAAASDSTKPKGGIGLVINDVSDPASKLSPLSTEWAVKDVDSDAID-ALQVELSCTSGT 202

Query: 630  LDVTYIVTLYPLSMATAVIVKNNGKKAVNLTSAMLSYLKFKGRGGSAIRGFKGCSYCIHP 451
            LD+TY+V+LYP SMATAV+V NNG+K V+LTSAMLS+ KFK RGG+AI+G KGCSYC HP
Sbjct: 203  LDITYVVSLYPESMATAVLVNNNGRKPVSLTSAMLSHFKFKRRGGAAIQGLKGCSYCSHP 262

Query: 450  PLSSRFELLSPVEAMKPEPLGWFSFSEPENVKPGSWTTEKQLYTVLKNKMSRVYTAPPME 271
            PLSS FE+LSP EAMK E  GWFSF      K GSWT +   Y +LKNK+SRVYT PP E
Sbjct: 263  PLSSPFEILSPAEAMKTESPGWFSFDSESEKKRGSWTIQDDPYIILKNKLSRVYTTPPTE 322

Query: 270  RLKRIYRTPPSKYETIDQWKGLEYRLIRMGYEDIYLSSPGSSSQKFGDGYFICTGPASML 91
            RLK  Y TPPSKYETIDQ + L +R+IR+GYEDIYLSSPGS S+K+G  YFICTGPAS+L
Sbjct: 323  RLKEFYDTPPSKYETIDQGRELFFRVIRIGYEDIYLSSPGSFSEKYGKDYFICTGPASIL 382

Query: 90   VPVIVNPGEDWRGAQVIEHDN 28
            VPV+VNPGE WR AQVIEHDN
Sbjct: 383  VPVVVNPGEGWRAAQVIEHDN 403



 Score =  100 bits (250), Expect = 5e-19
 Identities = 87/345 (25%), Positives = 155/345 (44%), Gaps = 29/345 (8%)
 Frame = -1

Query: 972  LDEKFGRKGIKFTDSGN---VEMTVRNGSSLSLQISNGHVTSYKPKVYWQDDEFEEVLYT 802
            L+ +F   G+ F   G+   V+M + NGS  SL + +G +TSYK  + W     E VL+T
Sbjct: 427  LETQFSGHGVTFEGIGDSYVVKMGLENGSLASLMLPSGLITSYKAPM-WHGGTLE-VLHT 484

Query: 801  VPGELDS---MKGGIGLVLNEVSETNSKGTPVCTXXXXXXXXXXXXXDALQVEL--NCTC 637
               E DS   ++GG+ L L   S+     +P                + +QVE+  + + 
Sbjct: 485  TVTEEDSGAVIQGGVSLALECESDGGISWSP---SSWILQDVRGNAEELIQVEMVSSDSE 541

Query: 636  GTLDVTYIVTLYPLSMATAVIVKNNGKKAVNLTSAMLSYLKFKGRGGSAIRGFKGCSYCI 457
               +  YIVTL    +++ +++ N     + LT +++S+L       +   G +G ++  
Sbjct: 542  NMAEAKYIVTLQQDIISSEIVISNLKSLPLQLTGSVISHLTVSNLDATYAIGLEGSNFFS 601

Query: 456  HPPLSSRFELLSPVEAMKPEPLGWFSFSEP--------------------ENVKPGSWTT 337
              P  S F L+ P    K E      + +P                    E +K      
Sbjct: 602  RTPFLSNFGLIPPDFGQKNEVGSSQLWGQPGIRRFLSGSNAKNQNNADQVERIKKEEMEG 661

Query: 336  EKQ-LYTVLKNKMSRVYTAPPMERLKRIYRTPPSKYETIDQWKGLEYRLIRMGYEDIYLS 160
            E++  Y  L ++MSR+YT+ P              +  ID+ +     + R G++++Y+ 
Sbjct: 662  EEEDNYKQLSSEMSRIYTSAPRN------------FTVIDRGRRNSVVVGRDGFKELYMF 709

Query: 159  SPGSSSQKFGDGYFICTGPASMLVPVIVNPGEDWRGAQVIEHDNL 25
            SPGS+ + +    +IC G +++L P+I+ P + WRG Q + + NL
Sbjct: 710  SPGSTHECYSKYTYICVGQSAVLKPIILGPEDVWRGGQHLHNPNL 754


>ref|XP_002525436.1| conserved hypothetical protein [Ricinus communis]
            gi|223535249|gb|EEF36926.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 353

 Score =  409 bits (1050), Expect = e-112
 Identities = 212/351 (60%), Positives = 252/351 (71%), Gaps = 5/351 (1%)
 Frame = -1

Query: 1062 LSFPLPNPKLNSIKXXXXXXXXXXXXXXXTLDEKFGRKGIKFTDSGNV---EMTVRNGSS 892
            LS  LP P +  IK                L+EKFGRKGIKF +S N+   E+TVRNGSS
Sbjct: 5    LSLSLPKPTI--IKATSSTTTTTTLPSPDVLEEKFGRKGIKFLESNNIPIAELTVRNGSS 62

Query: 891  LSLQISNGHVTSYKPKVYWQDDEFEEVLYTVPGELDSMK--GGIGLVLNEVSETNSKGTP 718
            L LQI + HVTSYKPKVYW+DD F E+LYTVPG+  S K  GGIGLV+N+ S++ SKG+ 
Sbjct: 63   LRLQIPDAHVTSYKPKVYWKDDGFHEILYTVPGKDSSSKARGGIGLVINDASDSGSKGSL 122

Query: 717  VCTXXXXXXXXXXXXXDALQVELNCTCGTLDVTYIVTLYPLSMATAVIVKNNGKKAVNLT 538
            +               DALQVEL CT GTLD++YIV+LYP SMATAVIVKNNG+K V LT
Sbjct: 123  ITNSEWTVKDVDSDAIDALQVELGCTSGTLDISYIVSLYPESMATAVIVKNNGRKPVTLT 182

Query: 537  SAMLSYLKFKGRGGSAIRGFKGCSYCIHPPLSSRFELLSPVEAMKPEPLGWFSFSEPENV 358
            SA+LS+LKFK R  +A++GF+GCSY  HPPLSS FE+LSP EAMK E  G F FS     
Sbjct: 183  SAILSHLKFKRRQKAAVQGFRGCSYLPHPPLSSPFEILSPGEAMKSESPGLFDFSSEPED 242

Query: 357  KPGSWTTEKQLYTVLKNKMSRVYTAPPMERLKRIYRTPPSKYETIDQWKGLEYRLIRMGY 178
            K G W  +   +T+LKNK SR+Y APP ERLK  Y TPPSKYET+DQ   L +R+IRMG+
Sbjct: 243  KLGIWGVQDVPFTILKNKFSRIYAAPPQERLKAFYNTPPSKYETLDQGLELFFRVIRMGF 302

Query: 177  EDIYLSSPGSSSQKFGDGYFICTGPASMLVPVIVNPGEDWRGAQVIEHDNL 25
            ED Y+ SPGS S+K+G+ YFICTGPA+M+VPVIV PGEDWRGAQVIEHDNL
Sbjct: 303  EDTYMGSPGSLSEKYGEEYFICTGPAAMIVPVIVKPGEDWRGAQVIEHDNL 353


>ref|XP_002325834.1| predicted protein [Populus trichocarpa] gi|222862709|gb|EEF00216.1|
            predicted protein [Populus trichocarpa]
          Length = 355

 Score =  387 bits (995), Expect = e-105
 Identities = 199/353 (56%), Positives = 253/353 (71%), Gaps = 7/353 (1%)
 Frame = -1

Query: 1062 LSFPLPNPKLNSIKXXXXXXXXXXXXXXXTLDEKFGRKGIKFTDSGNV---EMTVRNGSS 892
            LSF L  P +  IK                L+EKFGRKGIKF +S NV   E+ VRNGSS
Sbjct: 5    LSFSLRKPSI--IKATSLSPTTTSPSTPEVLEEKFGRKGIKFLESNNVPTVELKVRNGSS 62

Query: 891  LSLQISNGHVTSYKPKVYWQDDEFEEVLYTVPG-ELDSM---KGGIGLVLNEVSETNSKG 724
            + +QI N +V+SYKPKVYW+DD FEEVLYT+PG E DS    KGGIGLV+N+ SE  SKG
Sbjct: 63   VRVQIPNAYVSSYKPKVYWKDDGFEEVLYTLPGKEKDSSGIAKGGIGLVINDASEGGSKG 122

Query: 723  TPVCTXXXXXXXXXXXXXDALQVELNCTCGTLDVTYIVTLYPLSMATAVIVKNNGKKAVN 544
            + + +             DA+QVEL+C+ G L+++Y+V+LYPLSMA+AVIVKNNG+K V 
Sbjct: 123  SLISSSEWTVKDVDSDSIDAVQVELSCSSGPLEISYVVSLYPLSMASAVIVKNNGRKDVT 182

Query: 543  LTSAMLSYLKFKGRGGSAIRGFKGCSYCIHPPLSSRFELLSPVEAMKPEPLGWFSFSEPE 364
            LTSA+LS+LKFK R  + I+G + C YC  PPLSS FE+LSP EA+KPE  G   F    
Sbjct: 183  LTSAILSHLKFKKRAKAGIQGLRKCYYCTQPPLSSPFEVLSPSEALKPESPGLLDFDFEP 242

Query: 363  NVKPGSWTTEKQLYTVLKNKMSRVYTAPPMERLKRIYRTPPSKYETIDQWKGLEYRLIRM 184
              KPGSW  +++ Y +LK+++SRVY APP ERLK  Y T P+KYET+DQ K L +R+IR+
Sbjct: 243  EEKPGSWKVQEEPYIILKDRLSRVYAAPPQERLKAFYNTSPTKYETLDQGKELFFRVIRI 302

Query: 183  GYEDIYLSSPGSSSQKFGDGYFICTGPASMLVPVIVNPGEDWRGAQVIEHDNL 25
            G+EDIY+ SPGS ++K+G  YFICTGPA+MLVPV+V PGE+W+GAQ+IEHDNL
Sbjct: 303  GFEDIYIGSPGSFAEKYGKDYFICTGPAAMLVPVVVKPGEEWKGAQMIEHDNL 355


>ref|XP_003548753.1| PREDICTED: uncharacterized protein LOC100805680 [Glycine max]
          Length = 359

 Score =  384 bits (985), Expect = e-104
 Identities = 205/357 (57%), Positives = 244/357 (68%), Gaps = 10/357 (2%)
 Frame = -1

Query: 1065 FLSFPLPNPKLNSIKXXXXXXXXXXXXXXXT----LDEKFGRKGIKFTDSGN---VEMTV 907
            FLS  LP  KLN IK                    L+EKFGRKGIKF +S N   V++TV
Sbjct: 4    FLSLSLP--KLNLIKASSAANTTTTTTTTLPTAETLNEKFGRKGIKFLESDNTPIVDLTV 61

Query: 906  RNGSSLSLQISNGHVTSYKPKVYWQDDEFEEVLYTVPGELDS---MKGGIGLVLNEVSET 736
            RNGSSL L+I + HVTSYKPKV W+DD F+EVLYT+P         KGG+GLV+NEV + 
Sbjct: 62   RNGSSLRLRIPDAHVTSYKPKVNWKDDGFQEVLYTIPATETGPYKAKGGVGLVMNEVLQP 121

Query: 735  NSKGTPVCTXXXXXXXXXXXXXDALQVELNCTCGTLDVTYIVTLYPLSMATAVIVKNNGK 556
             +KG    T             DALQVEL+CT    D+TYIVTLYP+SMATAV+ KN G 
Sbjct: 122  GAKGLLPSTLEWTVNDVDSDSIDALQVELSCTSRFFDITYIVTLYPVSMATAVVAKNIGP 181

Query: 555  KAVNLTSAMLSYLKFKGRGGSAIRGFKGCSYCIHPPLSSRFELLSPVEAMKPEPLGWFSF 376
            K   LT+A+LS+ +FK R G+AI+G + CSY  H PLSS F++L+P EA   EP  W SF
Sbjct: 182  KPATLTNAILSHFRFKNRRGTAIKGLRSCSYIPHAPLSSPFQILTPSEATISEPPRWLSF 241

Query: 375  SEPENVKPGSWTTEKQLYTVLKNKMSRVYTAPPMERLKRIYRTPPSKYETIDQWKGLEYR 196
                  KPG+W  +    T+L+NKMSRVY APP ERLK  Y TPPSKYETIDQ +GL +R
Sbjct: 242  GNETEAKPGTWGQQALSITLLENKMSRVYAAPPKERLKAFYNTPPSKYETIDQGRGLCFR 301

Query: 195  LIRMGYEDIYLSSPGSSSQKFGDGYFICTGPASMLVPVIVNPGEDWRGAQVIEHDNL 25
            +IRMG+EDIYLSSPGS S+K+G  YFICTGPAS+LVPV VNPGE+WRGAQVIEHDNL
Sbjct: 302  VIRMGFEDIYLSSPGSLSEKYGKDYFICTGPASILVPVTVNPGEEWRGAQVIEHDNL 358


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