BLASTX nr result

ID: Coptis23_contig00023636 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023636
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78161.1| hypothetical protein VITISV_040921 [Vitis vinifera]   153   2e-35
emb|CBI29278.3| unnamed protein product [Vitis vinifera]              152   3e-35
ref|XP_002268278.1| PREDICTED: indole-3-acetic acid-amido synthe...   152   3e-35
ref|XP_002299361.1| GH3 family protein [Populus trichocarpa] gi|...   134   6e-30
ref|XP_004165547.1| PREDICTED: indole-3-acetic acid-amido synthe...   129   2e-28

>emb|CAN78161.1| hypothetical protein VITISV_040921 [Vitis vinifera]
          Length = 676

 Score =  153 bits (386), Expect = 2e-35
 Identities = 73/101 (72%), Positives = 90/101 (89%)
 Frame = -2

Query: 305 KMLLNCDPNDGEGSMRLIEELTTNADQVQQQILNEILSQNAETEYLGGFLNGHTEKEMFK 126
           +MLL+CDP+D E  + L+E+LTTNA+QVQ ++L EIL+QNA TEYL G+L+GH++K +FK
Sbjct: 4   RMLLSCDPHDNEAGLMLLEDLTTNANQVQLEVLEEILTQNANTEYLRGYLDGHSDKGLFK 63

Query: 125 KKVPIVNYDDIKPYIERIANGEPSRIISNQLITELLTSSGT 3
           KKVPIVNY+DIKP+IERIANGEPSRIIS Q ITELLTSSGT
Sbjct: 64  KKVPIVNYEDIKPHIERIANGEPSRIISAQPITELLTSSGT 104


>emb|CBI29278.3| unnamed protein product [Vitis vinifera]
          Length = 495

 Score =  152 bits (384), Expect = 3e-35
 Identities = 73/100 (73%), Positives = 89/100 (89%)
 Frame = -2

Query: 302 MLLNCDPNDGEGSMRLIEELTTNADQVQQQILNEILSQNAETEYLGGFLNGHTEKEMFKK 123
           MLL+CDP+D E  + L+E+LTTNA+QVQ ++L EIL+QNA TEYL G+L+GH++K +FKK
Sbjct: 1   MLLSCDPHDNEAGLMLLEDLTTNANQVQLEVLEEILTQNANTEYLRGYLDGHSDKGLFKK 60

Query: 122 KVPIVNYDDIKPYIERIANGEPSRIISNQLITELLTSSGT 3
           KVPIVNY+DIKP+IERIANGEPSRIIS Q ITELLTSSGT
Sbjct: 61  KVPIVNYEDIKPHIERIANGEPSRIISAQPITELLTSSGT 100


>ref|XP_002268278.1| PREDICTED: indole-3-acetic acid-amido synthetase GH3.17-like [Vitis
           vinifera]
          Length = 607

 Score =  152 bits (384), Expect = 3e-35
 Identities = 73/100 (73%), Positives = 89/100 (89%)
 Frame = -2

Query: 302 MLLNCDPNDGEGSMRLIEELTTNADQVQQQILNEILSQNAETEYLGGFLNGHTEKEMFKK 123
           MLL+CDP+D E  + L+E+LTTNA+QVQ ++L EIL+QNA TEYL G+L+GH++K +FKK
Sbjct: 1   MLLSCDPHDNEAGLMLLEDLTTNANQVQLEVLEEILTQNANTEYLRGYLDGHSDKGLFKK 60

Query: 122 KVPIVNYDDIKPYIERIANGEPSRIISNQLITELLTSSGT 3
           KVPIVNY+DIKP+IERIANGEPSRIIS Q ITELLTSSGT
Sbjct: 61  KVPIVNYEDIKPHIERIANGEPSRIISAQPITELLTSSGT 100


>ref|XP_002299361.1| GH3 family protein [Populus trichocarpa]
           gi|222846619|gb|EEE84166.1| GH3 family protein [Populus
           trichocarpa]
          Length = 606

 Score =  134 bits (338), Expect = 6e-30
 Identities = 69/100 (69%), Positives = 78/100 (78%)
 Frame = -2

Query: 302 MLLNCDPNDGEGSMRLIEELTTNADQVQQQILNEILSQNAETEYLGGFLNGHTEKEMFKK 123
           ML   DPND E  ++L+E+LT NA Q+QQQ+L EIL+ N  TEYL  FLNG + KE FK 
Sbjct: 1   MLPVFDPNDNEAGLKLLEDLTNNACQIQQQVLEEILATNLHTEYLKSFLNGDSGKENFKN 60

Query: 122 KVPIVNYDDIKPYIERIANGEPSRIISNQLITELLTSSGT 3
           KVPIVNY+DIKP IERIANGEPS IIS Q ITELLTSSGT
Sbjct: 61  KVPIVNYEDIKPCIERIANGEPSSIISTQPITELLTSSGT 100


>ref|XP_004165547.1| PREDICTED: indole-3-acetic acid-amido synthetase GH3.17-like,
           partial [Cucumis sativus]
          Length = 409

 Score =  129 bits (325), Expect = 2e-28
 Identities = 64/104 (61%), Positives = 81/104 (77%), Gaps = 4/104 (3%)
 Frame = -2

Query: 302 MLLNCDPNDGEGSMRLIEELTTNADQVQQQILNEILSQNAETEYLGGFLNGH----TEKE 135
           ML N DPN+ E  ++L+E+LTTNA Q+Q+Q++ +IL QN+ TEYL  FL+ H     + +
Sbjct: 1   MLPNFDPNNNESGLKLLEDLTTNAKQIQEQVIQKILIQNSNTEYLKSFLHNHHSHSLDLQ 60

Query: 134 MFKKKVPIVNYDDIKPYIERIANGEPSRIISNQLITELLTSSGT 3
            FK  VP+VNY+DIKPYIERIANGEPS IIS+Q ITELLTSSGT
Sbjct: 61  TFKHSVPVVNYEDIKPYIERIANGEPSHIISSQPITELLTSSGT 104


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