BLASTX nr result

ID: Coptis23_contig00023618 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023618
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_175492.1| Aminotransferase-like, plant mobile domain fami...    74   9e-12
ref|XP_002319296.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11
ref|NP_175496.1| Aminotransferase-like, plant mobile domain fami...    73   3e-11
ref|XP_002319830.1| predicted protein [Populus trichocarpa] gi|2...    73   3e-11
gb|ABK28145.1| unknown [Arabidopsis thaliana]                          73   3e-11

>ref|NP_175492.1| Aminotransferase-like, plant mobile domain family protein
           [Arabidopsis thaliana]
           gi|12321804|gb|AAG50946.1|AC079284_21 hypothetical
           protein [Arabidopsis thaliana]
           gi|332194468|gb|AEE32589.1| Aminotransferase-like, plant
           mobile domain family protein [Arabidopsis thaliana]
          Length = 632

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 37/100 (37%), Positives = 53/100 (53%)
 Frame = +3

Query: 9   LKPCCMDQHIGTLVPPRPPHLSRTKPHDLPECRLDVHFEGWKLPRGEIWKQWVDKLEPIY 188
           LKPC      G+     P + S   P +L      V F GW+ P    +K W  K+  ++
Sbjct: 19  LKPCNNTSIDGS---ETPQNRSAPSPPELKFLSFSVSFNGWRFPNKN-FKSWARKMAALH 74

Query: 189 GPTWKKIGIYDSIFVSTYCFPIDKELVVGLAESWCPDTNT 308
            P W+K GI++++  STY    + ELV+G+AE WCPDT T
Sbjct: 75  EPIWRKAGIFEAVTASTYKINPNTELVLGIAEKWCPDTKT 114


>ref|XP_002319296.1| predicted protein [Populus trichocarpa] gi|222857672|gb|EEE95219.1|
           predicted protein [Populus trichocarpa]
          Length = 661

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 39/101 (38%), Positives = 51/101 (50%)
 Frame = +3

Query: 6   FLKPCCMDQHIGTLVPPRPPHLSRTKPHDLPECRLDVHFEGWKLPRGEIWKQWVDKLEPI 185
           FLKP           PP     S     +  E  L ++F GW+ P+   W  WV KL+  
Sbjct: 32  FLKPTLATSTRSVPKPPTCSLSSLPSTFEPKEWLLKINFSGWQKPKLN-WATWVHKLKFK 90

Query: 186 YGPTWKKIGIYDSIFVSTYCFPIDKELVVGLAESWCPDTNT 308
           Y   WKK GIY++I  ST+    D + ++GLAE WCP TNT
Sbjct: 91  YQSLWKKAGIYEAIMHSTFIVVRDYDFIIGLAEKWCPKTNT 131


>ref|NP_175496.1| Aminotransferase-like, plant mobile domain family protein
           [Arabidopsis thaliana]
           gi|12321794|gb|AAG50936.1|AC079284_11 hypothetical
           protein [Arabidopsis thaliana]
           gi|91805351|gb|ABE65405.1| hypothetical protein
           At1g50820 [Arabidopsis thaliana]
           gi|332194472|gb|AEE32593.1| Aminotransferase-like, plant
           mobile domain family protein [Arabidopsis thaliana]
          Length = 528

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 29/65 (44%), Positives = 43/65 (66%)
 Frame = +3

Query: 114 VHFEGWKLPRGEIWKQWVDKLEPIYGPTWKKIGIYDSIFVSTYCFPIDKELVVGLAESWC 293
           + F GW+ P  + +K W  K+  ++ P W+K GI++++  STY  P D +LV+GLAE WC
Sbjct: 48  IKFWGWRFPNKK-FKSWARKMASLHEPIWRKAGIFEAVIASTYKIPKDTDLVLGLAEKWC 106

Query: 294 PDTNT 308
           PDT T
Sbjct: 107 PDTKT 111


>ref|XP_002319830.1| predicted protein [Populus trichocarpa] gi|222858206|gb|EEE95753.1|
           predicted protein [Populus trichocarpa]
          Length = 662

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
 Frame = +3

Query: 6   FLKPCCMDQHIGTLVPPRPPHLSRTKPHDLPECR--LDVHFEGWKLPRGEIWKQWVDKLE 179
           F+KP  +   I    P  P H + + P      +  L + F GW+  +   WK+WVDK+ 
Sbjct: 32  FIKPS-ITSSIDENTPKHPSHYNFSLPFKFEPKKWPLRITFHGWRNAQRR-WKEWVDKMA 89

Query: 180 PIYGPTWKKIGIYDSIFVSTYCFPIDKELVVGLAESWCPDTNT 308
            ++  TW+K+GIY ++  S Y    D + ++GLAE WC +TNT
Sbjct: 90  ALHEATWRKVGIYQAVMSSLYQIGRDDDFLIGLAEKWCFETNT 132


>gb|ABK28145.1| unknown [Arabidopsis thaliana]
          Length = 529

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 29/65 (44%), Positives = 43/65 (66%)
 Frame = +3

Query: 114 VHFEGWKLPRGEIWKQWVDKLEPIYGPTWKKIGIYDSIFVSTYCFPIDKELVVGLAESWC 293
           + F GW+ P  + +K W  K+  ++ P W+K GI++++  STY  P D +LV+GLAE WC
Sbjct: 48  IKFWGWRFPNKK-FKSWARKMASLHEPIWRKAGIFEAVIASTYKIPKDTDLVLGLAEKWC 106

Query: 294 PDTNT 308
           PDT T
Sbjct: 107 PDTKT 111


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