BLASTX nr result

ID: Coptis23_contig00023601 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023601
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACC68685.1| bHLH-like DNA binding protein [Vitis vinifera]         125   4e-27
emb|CBI32369.3| unnamed protein product [Vitis vinifera]              124   8e-27
ref|XP_002277508.1| PREDICTED: transcription factor TT8 [Vitis v...   124   8e-27
emb|CAN62848.1| hypothetical protein VITISV_010152 [Vitis vinifera]   123   2e-26
gb|ADL36597.1| BHLH domain class transcription factor [Malus x d...   116   2e-24

>gb|ACC68685.1| bHLH-like DNA binding protein [Vitis vinifera]
          Length = 701

 Score =  125 bits (314), Expect = 4e-27
 Identities = 72/105 (68%), Positives = 81/105 (77%), Gaps = 4/105 (3%)
 Frame = +3

Query: 3   IVEGSGGLKTKVLD-PPLLVGN---VVEVSIIECDALLEMKCAYREDLLLEIMQTLKELR 170
           IVEGS G K KV+D PP  V      VEVSIIE DALLEM+C YRE LLL++MQ L+ELR
Sbjct: 594 IVEGSTGAKPKVVDSPPAAVEGGTTTVEVSIIESDALLEMQCPYREGLLLDVMQMLRELR 653

Query: 171 MEVTAVQSSSNNGVFAAELRAKVKEVSSGKKVTIVEVKRAIYQII 305
           +E T VQSS  NGVF AELRAKVKE +SGKK +I+EVKRAI QII
Sbjct: 654 LETTTVQSSLTNGVFVAELRAKVKENASGKKASIMEVKRAINQII 698


>emb|CBI32369.3| unnamed protein product [Vitis vinifera]
          Length = 620

 Score =  124 bits (311), Expect = 8e-27
 Identities = 71/105 (67%), Positives = 81/105 (77%), Gaps = 4/105 (3%)
 Frame = +3

Query: 3   IVEGSGGLKTKVLD-PPLLVGN---VVEVSIIECDALLEMKCAYREDLLLEIMQTLKELR 170
           IVEGS G K KV+D PP  V      VEVSIIE DALLEM+C YRE LLL++MQ L++LR
Sbjct: 513 IVEGSTGAKPKVVDSPPAAVEGGTTTVEVSIIESDALLEMQCPYREGLLLDVMQMLRDLR 572

Query: 171 MEVTAVQSSSNNGVFAAELRAKVKEVSSGKKVTIVEVKRAIYQII 305
           +E T VQSS  NGVF AELRAKVKE +SGKK +I+EVKRAI QII
Sbjct: 573 LETTTVQSSLTNGVFVAELRAKVKENASGKKASIMEVKRAINQII 617


>ref|XP_002277508.1| PREDICTED: transcription factor TT8 [Vitis vinifera]
          Length = 696

 Score =  124 bits (311), Expect = 8e-27
 Identities = 71/105 (67%), Positives = 81/105 (77%), Gaps = 4/105 (3%)
 Frame = +3

Query: 3   IVEGSGGLKTKVLD-PPLLVGN---VVEVSIIECDALLEMKCAYREDLLLEIMQTLKELR 170
           IVEGS G K KV+D PP  V      VEVSIIE DALLEM+C YRE LLL++MQ L++LR
Sbjct: 589 IVEGSTGAKPKVVDSPPAAVEGGTTTVEVSIIESDALLEMQCPYREGLLLDVMQMLRDLR 648

Query: 171 MEVTAVQSSSNNGVFAAELRAKVKEVSSGKKVTIVEVKRAIYQII 305
           +E T VQSS  NGVF AELRAKVKE +SGKK +I+EVKRAI QII
Sbjct: 649 LETTTVQSSLTNGVFVAELRAKVKENASGKKASIMEVKRAINQII 693


>emb|CAN62848.1| hypothetical protein VITISV_010152 [Vitis vinifera]
          Length = 668

 Score =  123 bits (308), Expect = 2e-26
 Identities = 71/105 (67%), Positives = 80/105 (76%), Gaps = 4/105 (3%)
 Frame = +3

Query: 3   IVEGSGGLKTKVLD-PPLLVGN---VVEVSIIECDALLEMKCAYREDLLLEIMQTLKELR 170
           IVEGS G K KV+D PP  V      VEVSIIE DALLEM+C YRE LLL++MQ L+ LR
Sbjct: 561 IVEGSTGAKPKVVDSPPAAVEGGTTTVEVSIIESDALLEMQCPYREGLLLDVMQMLRXLR 620

Query: 171 MEVTAVQSSSNNGVFAAELRAKVKEVSSGKKVTIVEVKRAIYQII 305
           +E T VQSS  NGVF AELRAKVKE +SGKK +I+EVKRAI QII
Sbjct: 621 LETTTVQSSLTNGVFVAELRAKVKENASGKKASIMEVKRAINQII 665


>gb|ADL36597.1| BHLH domain class transcription factor [Malus x domestica]
          Length = 709

 Score =  116 bits (290), Expect = 2e-24
 Identities = 67/121 (55%), Positives = 82/121 (67%), Gaps = 20/121 (16%)
 Frame = +3

Query: 3   IVEGSGGL---KTKVLDP-----------------PLLVGNVVEVSIIECDALLEMKCAY 122
           IVEGSGG+   K KV++                  P++ G  +EVSIIE D LLE++C Y
Sbjct: 584 IVEGSGGVAIGKAKVMEDSPPSPPPPPPQPEPLPTPMVTGTSLEVSIIESDGLLELQCPY 643

Query: 123 REDLLLEIMQTLKELRMEVTAVQSSSNNGVFAAELRAKVKEVSSGKKVTIVEVKRAIYQI 302
           RE LLL++M+TL+ELR+E T VQSS NNG F AELRAKVK+  SGKKV+I EVKR I QI
Sbjct: 644 REGLLLDVMRTLRELRIETTVVQSSLNNGFFVAELRAKVKDNVSGKKVSITEVKRVINQI 703

Query: 303 I 305
           I
Sbjct: 704 I 704


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