BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023598
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ...    65   8e-09
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li...    65   8e-09
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]        62   5e-08
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08
ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08

>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 893

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 37/87 (42%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
 Frame = -3

Query: 260 VQQQNMDKTVRRCYKGWSVEHNYMYSDQGKIWVCWNTNMCKVRVMERELQHITVEVTLTS 81
           V+Q    K +     GWS   NY +S  GKIWV W+ ++ KV V+ R LQ IT E+ L  
Sbjct: 41  VKQPKEKKFISNLLPGWSFVENYEFSVLGKIWVLWDPSV-KVVVIGRSLQMITCELLLPD 99

Query: 80  S-KVFMATFLYASTDLVTRRELWHRLV 3
           S   F+ + +YAS +  TR+ELW+ LV
Sbjct: 100 SPSWFVVSIVYASNEEGTRKELWNELV 126


>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 893

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 37/87 (42%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
 Frame = -3

Query: 260 VQQQNMDKTVRRCYKGWSVEHNYMYSDQGKIWVCWNTNMCKVRVMERELQHITVEVTLTS 81
           V+Q    K +     GWS   NY +S  GKIWV W+ ++ KV V+ R LQ IT E+ L  
Sbjct: 41  VKQPKEKKFISNLLPGWSFVENYEFSVLGKIWVLWDPSV-KVVVIGRSLQMITCELLLPD 99

Query: 80  S-KVFMATFLYASTDLVTRRELWHRLV 3
           S   F+ + +YAS +  TR+ELW+ LV
Sbjct: 100 SPSWFVVSIVYASNEEGTRKELWNELV 126


>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 33/87 (37%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
 Frame = -3

Query: 260 VQQQNMDKTVRRCYKGWSVEHNYMYSDQGKIWVCWNTNMCKVRVMERELQHITVEVTLTS 81
           V+Q    K +     GWS   NY +SD GKIWV W+ ++ +V V+ + LQ IT EV L  
Sbjct: 41  VKQPKDRKFINALLPGWSFVENYAFSDLGKIWVMWDPSV-QVVVVAKSLQMITCEVLLPG 99

Query: 80  SKVF-MATFLYASTDLVTRRELWHRLV 3
           S  + + + +YA+ ++ +R+ELW  +V
Sbjct: 100 SPSWIIVSVVYAANEVASRKELWIEIV 126


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
           predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
 Frame = -3

Query: 263 KVQQQNMDKTVRRCYKGWSVEHNYMYSDQGKIWVCWNTNMCKVRVMERELQHITVEVTLT 84
           +V+ +N D   +   + WS  +NY +S +G+IWVCWN +  KV V     Q I V VT+ 
Sbjct: 562 RVKDKNKDNVTQLLLRSWSFLYNYDFSCRGRIWVCWNADTVKVDVFGMSDQAIHVSVTIL 621

Query: 83  SSKV-FMATFLYASTDLVTRRELWHRLV 3
           ++ + F  + +Y   +   R  LW  +V
Sbjct: 622 ATNISFNTSIIYGDNNASLREALWSDIV 649



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
 Frame = -3

Query: 263  KVQQQNMDKTVRRCYKGWSVEHNYMYSDQGKIWVCWNTNMCKVRVMERELQHITVEVTLT 84
            +V+ +N     +   + WS  +NY +S +G+IWVCWN +  KV V     Q I V VT+ 
Sbjct: 843  RVKDKNKYNVTQLLLRSWSFLYNYDFSCRGRIWVCWNADTVKVDVFGMSDQAIHVSVTIL 902

Query: 83   SSKV-FMATFLYASTDLVTRRELWHRLV 3
            ++ + F  + +Y   +   R  LW  +V
Sbjct: 903  ATNISFNTSIIYGDNNASLREALWSDIV 930


>ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|222874272|gb|EEF11403.1|
           predicted protein [Populus trichocarpa]
          Length = 503

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
 Frame = -3

Query: 263 KVQQQNMDKTVRRCYKGWSVEHNYMYSDQGKIWVCWNTNMCKVRVMERELQHITVEVTLT 84
           +V+ +N D   +   + WS  +NY +S +G+IWVCWN +  KV V     Q I V VT+ 
Sbjct: 22  RVKDKNKDNVSQLLLRSWSFLYNYDFSCRGRIWVCWNADTVKVNVFGMSDQAIHVSVTIL 81

Query: 83  SSKV-FMATFLYASTDLVTRRELWHRLV 3
           ++ + F  + +Y   +   R  LW  +V
Sbjct: 82  ATNISFNTSIIYGDNNASLREALWSDIV 109