BLASTX nr result

ID: Coptis23_contig00023587 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023587
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135137.1| PREDICTED: probable phosphatidylinositol 4-k...    56   6e-08
ref|XP_002875236.1| phosphatidylinositol 3-and 4-kinase family p...    54   2e-07
ref|XP_003518796.1| PREDICTED: probable phosphatidylinositol 4-k...    55   2e-07
ref|XP_003516565.1| PREDICTED: probable phosphatidylinositol 4-k...    55   2e-07
ref|XP_002267822.1| PREDICTED: probable phosphatidylinositol 4-k...    54   2e-07

>ref|XP_004135137.1| PREDICTED: probable phosphatidylinositol 4-kinase type 2-beta
           At1g26270-like isoform 1 [Cucumis sativus]
           gi|449434708|ref|XP_004135138.1| PREDICTED: probable
           phosphatidylinositol 4-kinase type 2-beta At1g26270-like
           isoform 2 [Cucumis sativus]
          Length = 645

 Score = 55.8 bits (133), Expect(2) = 6e-08
 Identities = 33/49 (67%), Positives = 34/49 (69%), Gaps = 9/49 (18%)
 Frame = -3

Query: 294 FILHDFDASD-GASSFPVAAVHRAGILDIN--------QNLLVRKLHGV 175
           FI HDFDASD G SSFPVAAVHR GILDI          NLLVRKL G+
Sbjct: 282 FIPHDFDASDHGTSSFPVAAVHRIGILDIRIFNTDRHAGNLLVRKLDGI 330



 Score = 25.8 bits (55), Expect(2) = 6e-08
 Identities = 11/14 (78%), Positives = 11/14 (78%)
 Frame = -1

Query: 179 GFGVFGQ*ELIPID 138
           G G FGQ ELIPID
Sbjct: 329 GIGTFGQVELIPID 342


>ref|XP_002875236.1| phosphatidylinositol 3-and 4-kinase family protein [Arabidopsis
           lyrata subsp. lyrata] gi|297321074|gb|EFH51495.1|
           phosphatidylinositol 3-and 4-kinase family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 650

 Score = 54.3 bits (129), Expect(2) = 2e-07
 Identities = 31/49 (63%), Positives = 34/49 (69%), Gaps = 9/49 (18%)
 Frame = -3

Query: 294 FILHDFDASD-GASSFPVAAVHRAGILDI--------NQNLLVRKLHGV 175
           F+ HDFDASD G SSFPVA+VHR GILDI          NLLV+KL GV
Sbjct: 285 FVAHDFDASDHGTSSFPVASVHRIGILDIRIFNTDRHGGNLLVKKLDGV 333



 Score = 25.8 bits (55), Expect(2) = 2e-07
 Identities = 11/14 (78%), Positives = 12/14 (85%)
 Frame = -1

Query: 179 GFGVFGQ*ELIPID 138
           G G+FGQ ELIPID
Sbjct: 332 GVGMFGQVELIPID 345


>ref|XP_003518796.1| PREDICTED: probable phosphatidylinositol 4-kinase type 2-beta
           At1g26270-like [Glycine max]
          Length = 643

 Score = 54.7 bits (130), Expect(2) = 2e-07
 Identities = 32/49 (65%), Positives = 34/49 (69%), Gaps = 9/49 (18%)
 Frame = -3

Query: 294 FILHDFDASD-GASSFPVAAVHRAGILDIN--------QNLLVRKLHGV 175
           FI HDFDASD G SSFPVA+VHR GILDI          NLLVRKL G+
Sbjct: 275 FIPHDFDASDHGTSSFPVASVHRIGILDIRILNTDRHAGNLLVRKLDGI 323



 Score = 25.0 bits (53), Expect(2) = 2e-07
 Identities = 11/14 (78%), Positives = 11/14 (78%)
 Frame = -1

Query: 179 GFGVFGQ*ELIPID 138
           G G FGQ ELIPID
Sbjct: 322 GIGSFGQVELIPID 335


>ref|XP_003516565.1| PREDICTED: probable phosphatidylinositol 4-kinase type 2-beta
           At1g26270-like [Glycine max]
          Length = 639

 Score = 54.7 bits (130), Expect(2) = 2e-07
 Identities = 32/49 (65%), Positives = 34/49 (69%), Gaps = 9/49 (18%)
 Frame = -3

Query: 294 FILHDFDASD-GASSFPVAAVHRAGILDIN--------QNLLVRKLHGV 175
           FI HDFDASD G SSFPVA+VHR GILDI          NLLVRKL G+
Sbjct: 275 FIPHDFDASDHGTSSFPVASVHRIGILDIRILNTDRHAGNLLVRKLDGI 323



 Score = 25.0 bits (53), Expect(2) = 2e-07
 Identities = 11/14 (78%), Positives = 11/14 (78%)
 Frame = -1

Query: 179 GFGVFGQ*ELIPID 138
           G G FGQ ELIPID
Sbjct: 322 GIGSFGQVELIPID 335


>ref|XP_002267822.1| PREDICTED: probable phosphatidylinositol 4-kinase type 2-beta
           At1g26270 isoform 1 [Vitis vinifera]
          Length = 629

 Score = 54.3 bits (129), Expect(2) = 2e-07
 Identities = 32/49 (65%), Positives = 33/49 (67%), Gaps = 9/49 (18%)
 Frame = -3

Query: 294 FILHDFDASD-GASSFPVAAVHRAGILDIN--------QNLLVRKLHGV 175
           FI HDFDA D G SSFPVAAVHR GILD+          NLLVRKL GV
Sbjct: 279 FIPHDFDAGDHGTSSFPVAAVHRIGILDVRIFNTDRHAGNLLVRKLDGV 327



 Score = 25.4 bits (54), Expect(2) = 2e-07
 Identities = 11/14 (78%), Positives = 11/14 (78%)
 Frame = -1

Query: 179 GFGVFGQ*ELIPID 138
           G G FGQ ELIPID
Sbjct: 326 GVGTFGQVELIPID 339


Top