BLASTX nr result

ID: Coptis23_contig00023580 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023580
         (822 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276934.1| PREDICTED: uncharacterized protein LOC100263...   255   9e-66
ref|XP_003533195.1| PREDICTED: uncharacterized protein LOC100800...   241   1e-61
ref|XP_002314929.1| predicted protein [Populus trichocarpa] gi|2...   241   1e-61
ref|XP_002519203.1| protein translocase, putative [Ricinus commu...   238   2e-60
ref|XP_002312339.1| predicted protein [Populus trichocarpa] gi|2...   237   2e-60

>ref|XP_002276934.1| PREDICTED: uncharacterized protein LOC100263757 [Vitis vinifera]
           gi|296083265|emb|CBI22901.3| unnamed protein product
           [Vitis vinifera]
          Length = 177

 Score =  255 bits (651), Expect = 9e-66
 Identities = 132/174 (75%), Positives = 150/174 (86%), Gaps = 9/174 (5%)
 Frame = +3

Query: 279 NLETRSLFD-----DKGGYFDLGHPLLNRVAESFVKAAGIGAVQAVSREAYFTAVEGAGF 443
           NLETRSL D     DKGG+FDLGHPLLNR AESFVKAAGIGA+QAVSREAYFTA+EG+G 
Sbjct: 4   NLETRSLLDELRDFDKGGFFDLGHPLLNRFAESFVKAAGIGAIQAVSREAYFTAIEGSGL 63

Query: 444 DSGNGVPDVTGHKKKRGIPHFRGETSQKSLEAIVKNTGKESLQWGMVAGMYSGLTYGLRE 623
           +S  GV +VT   KK+  P  +GE+S+KSLEA+VK+TGKESLQWG+ AGMYSGLTYGL+E
Sbjct: 64  ESPGGVTEVTVGGKKQRFPDLKGESSRKSLEALVKSTGKESLQWGLAAGMYSGLTYGLKE 123

Query: 624 ARGAHDWKNSAVAGA----ALALTSDCSSHEQIVQCAITGAAISTAANMLSGIF 773
           ARGAHDWKNSAVAGA    ALALTS+ +SHEQIVQCAITGAAISTAAN+L+GIF
Sbjct: 124 ARGAHDWKNSAVAGAVTGVALALTSNDTSHEQIVQCAITGAAISTAANLLTGIF 177


>ref|XP_003533195.1| PREDICTED: uncharacterized protein LOC100800540 [Glycine max]
          Length = 181

 Score =  241 bits (616), Expect = 1e-61
 Identities = 124/174 (71%), Positives = 142/174 (81%), Gaps = 9/174 (5%)
 Frame = +3

Query: 279 NLETRSLFDD-----KGGYFDLGHPLLNRVAESFVKAAGIGAVQAVSREAYFTAVEGAGF 443
           NLETRSL D+     K G FDLGHPLLNR+ E+FVKAAGIGAVQAVSREAYFTA+EG G 
Sbjct: 8   NLETRSLLDELCNFHKKGLFDLGHPLLNRILETFVKAAGIGAVQAVSREAYFTAIEGTGT 67

Query: 444 DSGNGVPDVTGHKKKRGIPHFRGETSQKSLEAIVKNTGKESLQWGMVAGMYSGLTYGLRE 623
           D+  G+P      KK  +P  +GET+ KSLEA+VKNTGKESLQWG+ AG+Y+GLTYGL+E
Sbjct: 68  DNSGGLPPEISSAKKNRLPSLKGETNNKSLEAMVKNTGKESLQWGVAAGLYAGLTYGLKE 127

Query: 624 ARGAHDWKNSAVA----GAALALTSDCSSHEQIVQCAITGAAISTAANMLSGIF 773
           ARGAHDWKNSAVA    GA LALT + S+HEQIVQCAITGAAISTAAN+L+GIF
Sbjct: 128 ARGAHDWKNSAVAGAITGATLALTLEDSTHEQIVQCAITGAAISTAANLLTGIF 181


>ref|XP_002314929.1| predicted protein [Populus trichocarpa] gi|222863969|gb|EEF01100.1|
           predicted protein [Populus trichocarpa]
          Length = 179

 Score =  241 bits (616), Expect = 1e-61
 Identities = 128/177 (72%), Positives = 142/177 (80%), Gaps = 12/177 (6%)
 Frame = +3

Query: 279 NLETRSLFD-----DKGGYFDLGHPLLNRVAESFVKAAGIGAVQAVSREAYFTAVEGAGF 443
           NLETRS  D     DK  +FD GHPLLNR+AESFVKAAGIGA+QAVSREAYFTA+EGAG 
Sbjct: 4   NLETRSFVDEIRHFDKSSFFDFGHPLLNRIAESFVKAAGIGAIQAVSREAYFTAIEGAGL 63

Query: 444 DSGNGVP---DVTGHKKKRGIPHFRGETSQKSLEAIVKNTGKESLQWGMVAGMYSGLTYG 614
           +S  G+P    V G K  R  P  RGET++KSLEA+V NTGKESLQWG+ AG+YSGLTYG
Sbjct: 64  ESSGGLPAEISVDGKKPHR-FPDLRGETNRKSLEALVMNTGKESLQWGLAAGVYSGLTYG 122

Query: 615 LREARGAHDWKNSAVAGA----ALALTSDCSSHEQIVQCAITGAAISTAANMLSGIF 773
           LRE+RG HDWKNSAVAGA    ALALT+D  SHEQIVQCAITGAAISTAAN+L GIF
Sbjct: 123 LRESRGVHDWKNSAVAGAITGVALALTADDKSHEQIVQCAITGAAISTAANLLKGIF 179


>ref|XP_002519203.1| protein translocase, putative [Ricinus communis]
           gi|223541518|gb|EEF43067.1| protein translocase,
           putative [Ricinus communis]
          Length = 181

 Score =  238 bits (606), Expect = 2e-60
 Identities = 125/177 (70%), Positives = 143/177 (80%), Gaps = 13/177 (7%)
 Frame = +3

Query: 282 LETRSLFDD-----KGGYFDLGHPLLNRVAESFVKAAGIGAVQAVSREAYFTAVEGAGFD 446
           L+TR+  D+     KG  FDLGHPLLNR+AESFVKAAGIGA+QAVSREAYFTA+EG+G D
Sbjct: 5   LQTRTFMDELRGFEKGWMFDLGHPLLNRIAESFVKAAGIGAIQAVSREAYFTAIEGSGLD 64

Query: 447 SGNGVPD----VTGHKKKRGIPHFRGETSQKSLEAIVKNTGKESLQWGMVAGMYSGLTYG 614
           S + VP         KK+   P  RGET+ KSLEA+VK+TGKES+QWG+ AG+YSGLTYG
Sbjct: 65  SSSSVPPELSPAGAAKKRNRFPDLRGETNGKSLEALVKSTGKESMQWGLAAGVYSGLTYG 124

Query: 615 LREARGAHDWKNSAVAGA----ALALTSDCSSHEQIVQCAITGAAISTAANMLSGIF 773
           LREARGAHDWKNSAVAGA    ALALT+D  SHEQIVQCAITGAAISTAAN+L+GIF
Sbjct: 125 LREARGAHDWKNSAVAGAVTGMALALTADDVSHEQIVQCAITGAAISTAANLLTGIF 181


>ref|XP_002312339.1| predicted protein [Populus trichocarpa] gi|222852159|gb|EEE89706.1|
           predicted protein [Populus trichocarpa]
          Length = 179

 Score =  237 bits (605), Expect = 2e-60
 Identities = 127/177 (71%), Positives = 144/177 (81%), Gaps = 12/177 (6%)
 Frame = +3

Query: 279 NLETRSLFD-----DKGGYFDLGHPLLNRVAESFVKAAGIGAVQAVSREAYFTAVEGAGF 443
           NLETRSL       DK  +FD GHPLLNR+AESFVKAAGIGA+QAVSREAYFTA+EG+GF
Sbjct: 4   NLETRSLMGEIRRFDKCCFFDFGHPLLNRIAESFVKAAGIGAIQAVSREAYFTAIEGSGF 63

Query: 444 DSGNGVP---DVTGHKKKRGIPHFRGETSQKSLEAIVKNTGKESLQWGMVAGMYSGLTYG 614
           +S  GVP    V G K+ R  P  RGET++KSLEA+V+NTGKESLQWG+ AG+YSGLTYG
Sbjct: 64  ESSGGVPPEISVDGKKRHRA-PDLRGETNRKSLEALVRNTGKESLQWGLAAGVYSGLTYG 122

Query: 615 LREARGAHDWKNSAVAGA----ALALTSDCSSHEQIVQCAITGAAISTAANMLSGIF 773
           L EARG HDWKN+AVAGA    ALALT+   SHEQIVQCAITGAAISTAAN+L+GIF
Sbjct: 123 LSEARGVHDWKNTAVAGAITGVALALTTADISHEQIVQCAITGAAISTAANLLTGIF 179


Top