BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023578
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598203.1| Pentatricopeptide repeat-containing protein ...   113   1e-23
ref|XP_002306265.1| predicted protein [Populus trichocarpa] gi|2...   113   2e-23
ref|XP_002264696.1| PREDICTED: pentatricopeptide repeat-containi...   112   4e-23
emb|CAN60200.1| hypothetical protein VITISV_039678 [Vitis vinifera]   111   5e-23
sp|Q0WP85.1|PP150_ARATH RecName: Full=Pentatricopeptide repeat-c...   108   6e-22

>ref|XP_003598203.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355487251|gb|AES68454.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 503

 Score =  113 bits (283), Expect = 1e-23
 Identities = 52/62 (83%), Positives = 59/62 (95%)
 Frame = +1

Query: 1   QYFVEMIEKGFLPQKITFETLYKGLIQADMLRTWRRLKKKLDEESITFGSEFQDLLFKPY 180
           QYFVEMIEKGFLPQK+TFETLY+GLIQ+DMLRTWRRLKK+LD+ESITFGSEFQ+   KPY
Sbjct: 442 QYFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKRLDQESITFGSEFQNYHLKPY 501

Query: 181 RR 186
           +R
Sbjct: 502 KR 503


>ref|XP_002306265.1| predicted protein [Populus trichocarpa] gi|222855714|gb|EEE93261.1|
           predicted protein [Populus trichocarpa]
          Length = 548

 Score =  113 bits (282), Expect = 2e-23
 Identities = 53/62 (85%), Positives = 58/62 (93%)
 Frame = +1

Query: 1   QYFVEMIEKGFLPQKITFETLYKGLIQADMLRTWRRLKKKLDEESITFGSEFQDLLFKPY 180
           ++FVEMIEKG LPQK+TFETLYKGLIQ+DMLRTWRRLKKKLDEESITFGSEFQ+   KPY
Sbjct: 487 KFFVEMIEKGLLPQKVTFETLYKGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYQLKPY 546

Query: 181 RR 186
           RR
Sbjct: 547 RR 548


>ref|XP_002264696.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
           mitochondrial [Vitis vinifera]
           gi|296088528|emb|CBI37519.3| unnamed protein product
           [Vitis vinifera]
          Length = 525

 Score =  112 bits (279), Expect = 4e-23
 Identities = 52/61 (85%), Positives = 58/61 (95%)
 Frame = +1

Query: 4   YFVEMIEKGFLPQKITFETLYKGLIQADMLRTWRRLKKKLDEESITFGSEFQDLLFKPYR 183
           +FVEMIEKG+LPQKITFETLY+GLIQ+DML+TWRRLKKKL+EESITFGSEFQ   FKPYR
Sbjct: 465 FFVEMIEKGYLPQKITFETLYRGLIQSDMLKTWRRLKKKLEEESITFGSEFQQYHFKPYR 524

Query: 184 R 186
           R
Sbjct: 525 R 525


>emb|CAN60200.1| hypothetical protein VITISV_039678 [Vitis vinifera]
          Length = 525

 Score =  111 bits (278), Expect = 5e-23
 Identities = 52/61 (85%), Positives = 58/61 (95%)
 Frame = +1

Query: 4   YFVEMIEKGFLPQKITFETLYKGLIQADMLRTWRRLKKKLDEESITFGSEFQDLLFKPYR 183
           +FVEMIEKG+LPQKITFETLY+GLIQ+DML+TWRRLKKKL+EESITFGSEFQ   FKPYR
Sbjct: 465 FFVEMIEKGYLPQKITFETLYRGLIQSDMLKTWRRLKKKLEEESITFGSEFQXYHFKPYR 524

Query: 184 R 186
           R
Sbjct: 525 R 525


>sp|Q0WP85.1|PP150_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g13420, mitochondrial; Flags: Precursor
           gi|110738270|dbj|BAF01064.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 509

 Score =  108 bits (269), Expect = 6e-22
 Identities = 50/61 (81%), Positives = 57/61 (93%)
 Frame = +1

Query: 4   YFVEMIEKGFLPQKITFETLYKGLIQADMLRTWRRLKKKLDEESITFGSEFQDLLFKPYR 183
           YFVEMIE+GFLPQK+TFETLYKGLIQ++ +RTWRRLKKKLDEESITFGSEFQ   F+PY+
Sbjct: 449 YFVEMIERGFLPQKLTFETLYKGLIQSNKMRTWRRLKKKLDEESITFGSEFQRYPFEPYK 508

Query: 184 R 186
           R
Sbjct: 509 R 509