BLASTX nr result

ID: Coptis23_contig00023576 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023576
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304070.1| predicted protein [Populus trichocarpa] gi|2...   102   3e-20
gb|ABK93694.1| unknown [Populus trichocarpa]                          102   3e-20
ref|XP_002273377.1| PREDICTED: rhomboid protease gluP [Vitis vin...    97   1e-18
ref|XP_002531417.1| KOM, putative [Ricinus communis] gi|22352896...    94   2e-17
gb|AFK38476.1| unknown [Medicago truncatula]                           85   7e-15

>ref|XP_002304070.1| predicted protein [Populus trichocarpa] gi|222841502|gb|EEE79049.1|
           predicted protein [Populus trichocarpa]
          Length = 325

 Score =  102 bits (254), Expect = 3e-20
 Identities = 50/94 (53%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
 Frame = -3

Query: 281 KGVEFLE-SRVSMSNTCSSCLYYFGKNGSISGFGDERKPFLETPSRNARKPFNGRLWTNV 105
           +G++ L+ S    ++TCSSCL +F   G+  GF +E  P LET  R++   FNGR WTN+
Sbjct: 64  QGIDVLQFSNDVFASTCSSCLCFFNGGGTRKGFRNEGSPNLETSGRSS---FNGRQWTNI 120

Query: 104 LIAINVLAYVAQLASHGKLVLWGAKINSLIDKGQ 3
           L+AIN+L Y AQ+A+ GKL+ WGAK+NSLIDKGQ
Sbjct: 121 LLAINILVYFAQIATRGKLLFWGAKVNSLIDKGQ 154


>gb|ABK93694.1| unknown [Populus trichocarpa]
          Length = 325

 Score =  102 bits (254), Expect = 3e-20
 Identities = 50/94 (53%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
 Frame = -3

Query: 281 KGVEFLE-SRVSMSNTCSSCLYYFGKNGSISGFGDERKPFLETPSRNARKPFNGRLWTNV 105
           +G++ L+ S    ++TCSSCL +F   G+  GF +E  P LET  R++   FNGR WTN+
Sbjct: 64  QGIDVLQFSNDVFASTCSSCLCFFNGGGTRKGFRNEGSPNLETSGRSS---FNGRQWTNI 120

Query: 104 LIAINVLAYVAQLASHGKLVLWGAKINSLIDKGQ 3
           L+AIN+L Y AQ+A+ GKL+ WGAK+NSLIDKGQ
Sbjct: 121 LLAINILVYFAQIATRGKLLFWGAKVNSLIDKGQ 154


>ref|XP_002273377.1| PREDICTED: rhomboid protease gluP [Vitis vinifera]
           gi|298204568|emb|CBI23843.3| unnamed protein product
           [Vitis vinifera]
          Length = 330

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 51/94 (54%), Positives = 63/94 (67%)
 Frame = -3

Query: 284 FKGVEFLESRVSMSNTCSSCLYYFGKNGSISGFGDERKPFLETPSRNARKPFNGRLWTNV 105
           F+G+ F     S S TCSS LY+FG   +  G  DE   + E P RN+ +   GR WTN+
Sbjct: 75  FQGISFPSD--SFSATCSSYLYFFGGEETRKGSRDEGMSYSEAPRRNSLR---GRQWTNI 129

Query: 104 LIAINVLAYVAQLASHGKLVLWGAKINSLIDKGQ 3
           LIAINVL ++ Q A+ GKL+LWGAKINSLIDKGQ
Sbjct: 130 LIAINVLVFIGQAATQGKLLLWGAKINSLIDKGQ 163


>ref|XP_002531417.1| KOM, putative [Ricinus communis] gi|223528967|gb|EEF30959.1| KOM,
           putative [Ricinus communis]
          Length = 340

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 46/95 (48%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
 Frame = -3

Query: 284 FKGVEFLE-SRVSMSNTCSSCLYYFGKNGSISGFGDERKPFLETPSRNARKPFNGRLWTN 108
           FKG++FL+ S   +++T S CL +F    +  G G +  P+ E    N+   FNGR WTN
Sbjct: 81  FKGIDFLQISNDVLASTTSHCLSFFNGGETGKGHGIQGAPYSEASKSNS---FNGRKWTN 137

Query: 107 VLIAINVLAYVAQLASHGKLVLWGAKINSLIDKGQ 3
           +L+AIN+L + AQ A+ GKL+ WGAK+NSLIDKGQ
Sbjct: 138 ILLAINILVFAAQFATQGKLLFWGAKVNSLIDKGQ 172


>gb|AFK38476.1| unknown [Medicago truncatula]
          Length = 327

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 46/99 (46%), Positives = 64/99 (64%), Gaps = 3/99 (3%)
 Frame = -3

Query: 290 LLFKGVEFLE-SRVSMSNTCSSCLYYF--GKNGSISGFGDERKPFLETPSRNARKPFNGR 120
           L  KG+ +L+ S   +++ CS+   +F  G+  + SG  D +         + + PFNGR
Sbjct: 66  LQLKGLNYLQLSSDGLTSACSTSFSFFNGGRPEASSGNSDSKM--------SRKNPFNGR 117

Query: 119 LWTNVLIAINVLAYVAQLASHGKLVLWGAKINSLIDKGQ 3
            WTN+L+A NVL YVAQLA+ GKL+ WGAK+NSLIDKGQ
Sbjct: 118 KWTNILLAANVLFYVAQLATQGKLLSWGAKVNSLIDKGQ 156


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