BLASTX nr result

ID: Coptis23_contig00023574 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023574
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279753.2| PREDICTED: uncharacterized protein LOC100267...   112   2e-23
emb|CBI33981.3| unnamed protein product [Vitis vinifera]              112   2e-23
gb|AAF79734.1|AC005106_15 T25N20.14 [Arabidopsis thaliana]            112   4e-23
ref|NP_172040.2| chromatin remodeling 31 [Arabidopsis thaliana] ...   112   4e-23
dbj|BAE98499.1| hypothetical protein [Arabidopsis thaliana]           112   4e-23

>ref|XP_002279753.2| PREDICTED: uncharacterized protein LOC100267731 [Vitis vinifera]
          Length = 1070

 Score =  112 bits (281), Expect = 2e-23
 Identities = 55/78 (70%), Positives = 66/78 (84%)
 Frame = +3

Query: 3    QLKDLFNWTEGEEILQMEGKCKAKLRQSIINNFNDPSSKVKVLLASTKACREGINLVGAS 182
            QLK  F+W  G+E+L M+G+   K RQS IN FNDP+S+V+VLLASTKAC EGI+LVGAS
Sbjct: 895  QLKYHFHWIVGKEVLYMDGQRDVKQRQSSINTFNDPASQVRVLLASTKACSEGISLVGAS 954

Query: 183  RIVLLDVVWNPSVERQAI 236
            R++LLDVVWNPSVERQAI
Sbjct: 955  RVILLDVVWNPSVERQAI 972


>emb|CBI33981.3| unnamed protein product [Vitis vinifera]
          Length = 554

 Score =  112 bits (281), Expect = 2e-23
 Identities = 55/78 (70%), Positives = 66/78 (84%)
 Frame = +3

Query: 3   QLKDLFNWTEGEEILQMEGKCKAKLRQSIINNFNDPSSKVKVLLASTKACREGINLVGAS 182
           QLK  F+W  G+E+L M+G+   K RQS IN FNDP+S+V+VLLASTKAC EGI+LVGAS
Sbjct: 379 QLKYHFHWIVGKEVLYMDGQRDVKQRQSSINTFNDPASQVRVLLASTKACSEGISLVGAS 438

Query: 183 RIVLLDVVWNPSVERQAI 236
           R++LLDVVWNPSVERQAI
Sbjct: 439 RVILLDVVWNPSVERQAI 456


>gb|AAF79734.1|AC005106_15 T25N20.14 [Arabidopsis thaliana]
          Length = 1465

 Score =  112 bits (279), Expect = 4e-23
 Identities = 52/73 (71%), Positives = 60/73 (82%)
 Frame = +3

Query: 18   FNWTEGEEILQMEGKCKAKLRQSIINNFNDPSSKVKVLLASTKACREGINLVGASRIVLL 197
            F W  GEE+L M GK + K RQ++IN FNDP SK KV LASTKAC EGI+LVGASR++LL
Sbjct: 1294 FKWNPGEEVLYMHGKLEQKQRQTLINEFNDPKSKAKVFLASTKACSEGISLVGASRVILL 1353

Query: 198  DVVWNPSVERQAI 236
            DVVWNP+VERQAI
Sbjct: 1354 DVVWNPAVERQAI 1366


>ref|NP_172040.2| chromatin remodeling 31 [Arabidopsis thaliana]
            gi|332189724|gb|AEE27845.1| chromatin remodeling 31
            [Arabidopsis thaliana]
          Length = 1410

 Score =  112 bits (279), Expect = 4e-23
 Identities = 52/73 (71%), Positives = 60/73 (82%)
 Frame = +3

Query: 18   FNWTEGEEILQMEGKCKAKLRQSIINNFNDPSSKVKVLLASTKACREGINLVGASRIVLL 197
            F W  GEE+L M GK + K RQ++IN FNDP SK KV LASTKAC EGI+LVGASR++LL
Sbjct: 1239 FKWNPGEEVLYMHGKLEQKQRQTLINEFNDPKSKAKVFLASTKACSEGISLVGASRVILL 1298

Query: 198  DVVWNPSVERQAI 236
            DVVWNP+VERQAI
Sbjct: 1299 DVVWNPAVERQAI 1311


>dbj|BAE98499.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1410

 Score =  112 bits (279), Expect = 4e-23
 Identities = 52/73 (71%), Positives = 60/73 (82%)
 Frame = +3

Query: 18   FNWTEGEEILQMEGKCKAKLRQSIINNFNDPSSKVKVLLASTKACREGINLVGASRIVLL 197
            F W  GEE+L M GK + K RQ++IN FNDP SK KV LASTKAC EGI+LVGASR++LL
Sbjct: 1239 FKWNPGEEVLYMHGKLEQKQRQTLINEFNDPKSKAKVFLASTKACSEGISLVGASRVILL 1298

Query: 198  DVVWNPSVERQAI 236
            DVVWNP+VERQAI
Sbjct: 1299 DVVWNPAVERQAI 1311


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