BLASTX nr result

ID: Coptis23_contig00023569 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023569
         (511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22661.3| unnamed protein product [Vitis vinifera]              213   2e-53
ref|XP_003634123.1| PREDICTED: UDP-N-acetylmuramate--L-alanine l...   208   3e-52
dbj|BAE45866.1| UDP-N-acetylmuramate-alanine ligase [Physcomitre...   162   2e-38
ref|XP_001776739.1| predicted protein [Physcomitrella patens sub...   150   1e-34
ref|XP_002960909.1| hypothetical protein SELMODRAFT_402370 [Sela...   147   9e-34

>emb|CBI22661.3| unnamed protein product [Vitis vinifera]
          Length = 626

 Score =  213 bits (541), Expect = 2e-53
 Identities = 103/144 (71%), Positives = 123/144 (85%)
 Frame = +2

Query: 80  NKKTWIHFVGVGGCGMSALAMLALKQGFEVSGSDIVWNEYMDRLREAGASLFVGHSVLNI 259
           N+K WIHFVG+GG G+SALAMLALKQGFEVSGSDIVW+ ++D L+E GA L +GHS  NI
Sbjct: 49  NRKGWIHFVGIGGSGLSALAMLALKQGFEVSGSDIVWSSFLDGLKETGAQLHLGHSESNI 108

Query: 260 ERKGCGSCLPDKVVVSSAIGSDNVEVLHAKAMGVHVLKRGNWLGMITEHHNLVAVSGTHG 439
           +R   GS LPD +VVSSAI  DN+E+LHAK++G+ V KRGNWLG +TEH+NL+AVSGTHG
Sbjct: 109 QRNN-GSSLPDAIVVSSAIPQDNLEILHAKSVGIPVYKRGNWLGKLTEHYNLIAVSGTHG 167

Query: 440 KTTTASMLAYVLSAMGVDLTAVVG 511
           K+TTASMLAYVL +MG DLTAVVG
Sbjct: 168 KSTTASMLAYVLKSMGDDLTAVVG 191


>ref|XP_003634123.1| PREDICTED: UDP-N-acetylmuramate--L-alanine ligase-like [Vitis
           vinifera]
          Length = 541

 Score =  208 bits (530), Expect = 3e-52
 Identities = 101/140 (72%), Positives = 120/140 (85%)
 Frame = +2

Query: 92  WIHFVGVGGCGMSALAMLALKQGFEVSGSDIVWNEYMDRLREAGASLFVGHSVLNIERKG 271
           WIHFVG+GG G+SALAMLALKQGFEVSGSDIVW+ ++D L+E GA L +GHS  NI+R  
Sbjct: 26  WIHFVGIGGSGLSALAMLALKQGFEVSGSDIVWSSFLDGLKETGAQLHLGHSESNIQRNN 85

Query: 272 CGSCLPDKVVVSSAIGSDNVEVLHAKAMGVHVLKRGNWLGMITEHHNLVAVSGTHGKTTT 451
            GS LPD +VVSSAI  DN+E+LHAK++G+ V KRGNWLG +TEH+NL+AVSGTHGK+TT
Sbjct: 86  -GSSLPDAIVVSSAIPQDNLEILHAKSVGIPVYKRGNWLGKLTEHYNLIAVSGTHGKSTT 144

Query: 452 ASMLAYVLSAMGVDLTAVVG 511
           ASMLAYVL +MG DLTAVVG
Sbjct: 145 ASMLAYVLKSMGDDLTAVVG 164


>dbj|BAE45866.1| UDP-N-acetylmuramate-alanine ligase [Physcomitrella patens]
          Length = 615

 Score =  162 bits (411), Expect = 2e-38
 Identities = 81/139 (58%), Positives = 108/139 (77%)
 Frame = +2

Query: 95  IHFVGVGGCGMSALAMLALKQGFEVSGSDIVWNEYMDRLREAGASLFVGHSVLNIERKGC 274
           +HFVG+GG G+SAL +LAL+QG++VSGSD+VW+E + RL+EAGA  +VGHSV  +  +G 
Sbjct: 119 VHFVGIGGAGLSALGLLALRQGWQVSGSDLVWSEEVIRLKEAGARAYVGHSVAQLVPQG- 177

Query: 275 GSCLPDKVVVSSAIGSDNVEVLHAKAMGVHVLKRGNWLGMITEHHNLVAVSGTHGKTTTA 454
            S  PD VVVSSA+G  N EV  A+A+ V + KRG+WLG ITE + L+AV+GTHGKTTT 
Sbjct: 178 -SQPPDAVVVSSAVGPGNEEVEAARALNVPIYKRGDWLGKITEGYQLIAVAGTHGKTTTT 236

Query: 455 SMLAYVLSAMGVDLTAVVG 511
           +ML+ VL  +G D+TA+VG
Sbjct: 237 AMLSVVLRNLGEDITAIVG 255


>ref|XP_001776739.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162671888|gb|EDQ58433.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 680

 Score =  150 bits (379), Expect = 1e-34
 Identities = 81/163 (49%), Positives = 109/163 (66%), Gaps = 24/163 (14%)
 Frame = +2

Query: 95  IHFVGVGGCGMSALAMLALKQGFEVSGSDIVWNEYMDRLREAGASLFVGHSVLNIERKGC 274
           +HFVG+GG G+SAL +LAL+QG++VSGSD+VW+E + RL+EAGA  +VGHSV  +  +  
Sbjct: 119 VHFVGIGGAGLSALGLLALRQGWQVSGSDLVWSEEVIRLKEAGARAYVGHSVAQLVPQ-- 176

Query: 275 GSCLPDKVVVSSAIGSDNVEVLHAKAMGVHVL------------------------KRGN 382
           GS  PD VVVSSA+G  N EV  A+A+ V ++                        KRG+
Sbjct: 177 GSQPPDAVVVSSAVGPGNEEVEAARALNVPIILERPHANDSESGWHFPYAGRSCSYKRGD 236

Query: 383 WLGMITEHHNLVAVSGTHGKTTTASMLAYVLSAMGVDLTAVVG 511
           WLG ITE + L+AV+GTHGKTTT +ML+ VL  +G D+TA+VG
Sbjct: 237 WLGKITEGYQLIAVAGTHGKTTTTAMLSVVLRNLGEDITAIVG 279


>ref|XP_002960909.1| hypothetical protein SELMODRAFT_402370 [Selaginella moellendorffii]
           gi|300171848|gb|EFJ38448.1| hypothetical protein
           SELMODRAFT_402370 [Selaginella moellendorffii]
          Length = 499

 Score =  147 bits (371), Expect = 9e-34
 Identities = 74/140 (52%), Positives = 98/140 (70%)
 Frame = +2

Query: 92  WIHFVGVGGCGMSALAMLALKQGFEVSGSDIVWNEYMDRLREAGASLFVGHSVLNIERKG 271
           W+HFVG+GG G+S LA+LALKQG++VSGSD  W+  +  L EAGA +  GH    +   G
Sbjct: 35  WVHFVGIGGTGLSPLALLALKQGWKVSGSDATWSNKLRSLEEAGAIVHAGHDERWLRDSG 94

Query: 272 CGSCLPDKVVVSSAIGSDNVEVLHAKAMGVHVLKRGNWLGMITEHHNLVAVSGTHGKTTT 451
                PD VVVSSAI ++N EV+ A+  G+ V+KR  WLG ITE + L+AV+GTHGK+TT
Sbjct: 95  I---FPDAVVVSSAIPAENEEVVAARRRGLRVIKRTEWLGEITEDYELIAVAGTHGKSTT 151

Query: 452 ASMLAYVLSAMGVDLTAVVG 511
            +MLA VL +   D+TA+VG
Sbjct: 152 TAMLAVVLQSFSDDITAIVG 171


Top