BLASTX nr result

ID: Coptis23_contig00023548 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023548
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004169512.1| PREDICTED: LOW QUALITY PROTEIN: ABC transpor...   168   5e-40
ref|XP_004135511.1| PREDICTED: ABC transporter C family member 3...   168   5e-40
ref|XP_002515003.1| multidrug resistance-associated protein 2, 6...   165   4e-39
ref|XP_002315633.1| multidrug resistance protein ABC transporter...   163   1e-38
ref|XP_002312645.1| multidrug resistance protein ABC transporter...   160   1e-37

>ref|XP_004169512.1| PREDICTED: LOW QUALITY PROTEIN: ABC transporter C family member
            3-like [Cucumis sativus]
          Length = 1444

 Score =  168 bits (425), Expect = 5e-40
 Identities = 81/119 (68%), Positives = 102/119 (85%)
 Frame = +1

Query: 28   QTSRV*WQVYSTFVSSAYKGSLIPIILLCQVLFQLLQIGSNYWIALATKEESVVSRKKLI 207
            QT RV W VYSTF++SAYKG+L+PIILLCQVLFQ+LQ+GSNYWI+ AT+EE  VSR++L+
Sbjct: 848  QTGRVKWSVYSTFITSAYKGALVPIILLCQVLFQILQMGSNYWISWATEEEGKVSREQLL 907

Query: 208  EVFVLLSSWSSIFFLVRDVLLATIAIETAQRLFLGMINSVFRAPILFFNSTPSSQVRNR 384
             +F+L+S  SSIF L R VL+ATIAIETAQR+FLGM+ S+F API FF++ PSSQ+ NR
Sbjct: 908  GIFILMSGGSSIFILGRAVLMATIAIETAQRMFLGMVTSIFAAPISFFDAKPSSQILNR 966


>ref|XP_004135511.1| PREDICTED: ABC transporter C family member 3-like [Cucumis sativus]
          Length = 1444

 Score =  168 bits (425), Expect = 5e-40
 Identities = 81/119 (68%), Positives = 102/119 (85%)
 Frame = +1

Query: 28   QTSRV*WQVYSTFVSSAYKGSLIPIILLCQVLFQLLQIGSNYWIALATKEESVVSRKKLI 207
            QT RV W VYSTF++SAYKG+L+PIILLCQVLFQ+LQ+GSNYWI+ AT+EE  VSR++L+
Sbjct: 848  QTGRVKWSVYSTFITSAYKGALVPIILLCQVLFQILQMGSNYWISWATEEEGKVSREQLL 907

Query: 208  EVFVLLSSWSSIFFLVRDVLLATIAIETAQRLFLGMINSVFRAPILFFNSTPSSQVRNR 384
             +F+L+S  SSIF L R VL+ATIAIETAQR+FLGM+ S+F API FF++ PSSQ+ NR
Sbjct: 908  GIFILMSGGSSIFILGRAVLMATIAIETAQRMFLGMVTSIFAAPISFFDAKPSSQILNR 966


>ref|XP_002515003.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
            gi|223546054|gb|EEF47557.1| multidrug
            resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
          Length = 1464

 Score =  165 bits (417), Expect = 4e-39
 Identities = 82/119 (68%), Positives = 101/119 (84%)
 Frame = +1

Query: 28   QTSRV*WQVYSTFVSSAYKGSLIPIILLCQVLFQLLQIGSNYWIALATKEESVVSRKKLI 207
            +T RV W VYSTFV+SAYKG+L+P+ILLCQV FQ LQ+GSNYWIA A+++   +SR++LI
Sbjct: 880  ETGRVKWSVYSTFVTSAYKGALVPVILLCQVFFQGLQMGSNYWIAWASEDRHKISREQLI 939

Query: 208  EVFVLLSSWSSIFFLVRDVLLATIAIETAQRLFLGMINSVFRAPILFFNSTPSSQVRNR 384
             +FVLLS  SSIF L R VLLA+IA+ETAQRLFLGMI S+FRAPI FF+STPSS++ NR
Sbjct: 940  GIFVLLSGGSSIFILGRAVLLASIAVETAQRLFLGMIKSIFRAPISFFDSTPSSRILNR 998


>ref|XP_002315633.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222864673|gb|EEF01804.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1044

 Score =  163 bits (413), Expect = 1e-38
 Identities = 83/126 (65%), Positives = 102/126 (80%)
 Frame = +1

Query: 7   RGSNRYRQTSRV*WQVYSTFVSSAYKGSLIPIILLCQVLFQLLQIGSNYWIALATKEESV 186
           R      +T RV W VYSTF++SAYKG+L+PIILLCQVLFQ LQ+GSNYWIA AT+E   
Sbjct: 473 RTQEEVSETGRVKWSVYSTFITSAYKGALVPIILLCQVLFQGLQMGSNYWIAWATEENHK 532

Query: 187 VSRKKLIEVFVLLSSWSSIFFLVRDVLLATIAIETAQRLFLGMINSVFRAPILFFNSTPS 366
           V+++KLI +F+LLS  SS+F L R V LATIAIETAQRLFLGMI+SVFRA I FF++TPS
Sbjct: 533 VTKEKLIGIFILLSGGSSVFILGRAVFLATIAIETAQRLFLGMISSVFRASISFFDATPS 592

Query: 367 SQVRNR 384
           S++ +R
Sbjct: 593 SRILSR 598


>ref|XP_002312645.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222852465|gb|EEE90012.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1361

 Score =  160 bits (405), Expect = 1e-37
 Identities = 80/119 (67%), Positives = 101/119 (84%)
 Frame = +1

Query: 28   QTSRV*WQVYSTFVSSAYKGSLIPIILLCQVLFQLLQIGSNYWIALATKEESVVSRKKLI 207
            +T RV W VYSTF++SAYKG+L+PIILLCQVLFQ LQ+GSNYWIA AT++   V+R+KLI
Sbjct: 784  ETGRVKWSVYSTFITSAYKGALVPIILLCQVLFQGLQMGSNYWIAWATEKSHNVTREKLI 843

Query: 208  EVFVLLSSWSSIFFLVRDVLLATIAIETAQRLFLGMINSVFRAPILFFNSTPSSQVRNR 384
             +F+LLS  SSIF L R VLLATIA+ETAQRLF GMI+S+F+A I FF++TPSS++ +R
Sbjct: 844  GIFILLSGGSSIFILGRAVLLATIAVETAQRLFFGMISSIFQATISFFDATPSSRILSR 902


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