BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023534
         (833 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_189164.1| Ribonuclease H-like protein [Arabidopsis thalia...    89   9e-16
gb|EEE59920.1| hypothetical protein OsJ_12548 [Oryza sativa Japo...    89   1e-15
gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indi...    88   3e-15
gb|EEE54600.1| hypothetical protein OsJ_01823 [Oryza sativa Japo...    82   2e-13
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo...    82   2e-13

>ref|NP_189164.1| Ribonuclease H-like protein [Arabidopsis thaliana]
           gi|9294184|dbj|BAB02086.1| reverse transcriptase-like
           protein [Arabidopsis thaliana]
           gi|332643482|gb|AEE77003.1| Ribonuclease H-like protein
           [Arabidopsis thaliana]
          Length = 343

 Score = 89.4 bits (220), Expect = 9e-16
 Identities = 59/204 (28%), Positives = 101/204 (49%), Gaps = 5/204 (2%)
 Frame = +3

Query: 156 MYTYWTIWKERCAHIFTGKTISLPIDIAKTANHLTS-QHLGKHHKNQTQPAQPSTHLPIT 332
           ++  W +WK R   +F  K+IS    + +  N +   +    + ++  Q    S H   T
Sbjct: 121 IWILWRLWKSRNQLVFQQKSISWQNTLQRARNDVQEWEDTNTYVQSLNQQVHSSRHQQPT 180

Query: 333 KT---WLAPPSSFVKINMDIAFYSEIKPVGIGYVMRDDNGIFLAAGTS-RACGRNAEEGE 500
                W  PPS+++K N D AF  + +    G++MRD+NG+++ +G +  +   ++ E E
Sbjct: 181 MARTKWQRPPSTWIKYNYDGAFNHQTRNAKAGWLMRDENGVYMGSGQAIGSTTSDSLESE 240

Query: 501 SRGLKCAIQWAYVLGYNKIIIETDCKTVADFWNHHATNIGRIAANIIIDAQYYISSFDSL 680
            + L  A+Q A+  GY K+I E D K V +  N+   N GR   N I + +++   F+  
Sbjct: 241 FQALIIAMQHAWSQGYRKVIFEGDSKQVEELMNNEKLNFGRF--NWIREGRFWQKRFEEA 298

Query: 681 TVTHVDRSCNKVAHRLATSAHHLR 752
               V R+ N+ A  LA   HHL+
Sbjct: 299 VFKWVPRTNNQPADILA--KHHLQ 320


>gb|EEE59920.1| hypothetical protein OsJ_12548 [Oryza sativa Japonica Group]
          Length = 1076

 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 73/249 (29%), Positives = 115/249 (46%), Gaps = 17/249 (6%)
 Frame = +3

Query: 135  EEWKLTCMYTYWTIWKERCAHIFTGKTISLPIDIAKTANH----LTSQHLG---KHHKNQ 293
            EE +   MY  W  W  R   I      S+   ++   ++    L ++ +    K  K  
Sbjct: 835  EEQRTHIMYMLWRAWYLRNDLIHGDGRCSIAGSVSFLTSYEEVLLPNRQMPDDIKGKKPM 894

Query: 294  TQPAQPSTHLPITKT--WLAPPSSFVKINMDIAFYSEIKPVGIGYVMRDDNGIFLAAG-- 461
                Q   H+   ++  W+APP    KIN+D  F  E      G V+RD  G+ L A   
Sbjct: 895  YSEGQKEKHMAEKQSSGWIAPPDGAAKINVDAGFRMETGEASAGIVIRDCRGLILLAACK 954

Query: 462  TSRACGRNAEEGES----RGLKCAIQWAYVLGYNKIIIETD-CKTVADFWNHHATNIGRI 626
            T   C  +AE+ E+     G++CA+QW ++     +I+ETD  + VA     H++    +
Sbjct: 955  TLHPCS-SAEQAEALASLEGIRCALQWIHM----PVILETDNAEVVARLKTKHSSR--SV 1007

Query: 627  AANIIIDAQYYISSFDSLTVTHVDRSCNKVAHRLATSAHHLRDCF-WEMEAPAWLLGLLQ 803
               +I++A+  +    ++ V H+ R  NKVAH LA  A    +C  W + APA +L LL 
Sbjct: 1008 WEGVIMEAKAAMQGLQAVEVAHIKRDSNKVAHTLAQMALSSGNCLEWRLCAPAEILELLN 1067

Query: 804  EELITCNIH 830
            +E   CN H
Sbjct: 1068 QE---CNPH 1073


>gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indica Group]
          Length = 1874

 Score = 87.8 bits (216), Expect = 3e-15
 Identities = 71/244 (29%), Positives = 113/244 (46%), Gaps = 17/244 (6%)
 Frame = +3

Query: 135  EEWKLTCMYTYWTIWKERCAHIFTGKTISLPIDIAKTANH----LTSQHLG---KHHKNQ 293
            EE +   MY  W  W  R   I      S+   ++   ++    L ++ +    K  K  
Sbjct: 1029 EEQRTHIMYMLWRAWYLRNDLIHGDGRCSIAGSVSFLTSYEEVLLPNRQMPDDIKGKKPM 1088

Query: 294  TQPAQPSTHLPITKT--WLAPPSSFVKINMDIAFYSEIKPVGIGYVMRDDNGIFLAAG-- 461
                Q   H+   ++  W+APP    KIN+D  F  E      G V+RD  G+ L A   
Sbjct: 1089 YSEGQKEKHMAEKQSSGWIAPPDGAAKINVDAGFRMETGEASAGIVIRDCRGLILLAACK 1148

Query: 462  TSRACGRNAEEGES----RGLKCAIQWAYVLGYNKIIIETD-CKTVADFWNHHATNIGRI 626
            T   C  +AE+ E+     G++CA+QW ++     +I+ETD  + VA     H++    +
Sbjct: 1149 TLHPCS-SAEQAEALASLEGIRCALQWIHM----PVILETDNAEVVARLKTKHSSR--SV 1201

Query: 627  AANIIIDAQYYISSFDSLTVTHVDRSCNKVAHRLATSAHHLRDCF-WEMEAPAWLLGLLQ 803
               +I++A+  +    ++ V H+ R  NKVAH LA  A    +C  W + APA +L LL 
Sbjct: 1202 WEGVIMEAKAAMQGLQAVEVAHIKRDSNKVAHTLAQMALSSGNCLEWRLCAPAEILELLN 1261

Query: 804  EELI 815
            +E I
Sbjct: 1262 QEYI 1265


>gb|EEE54600.1| hypothetical protein OsJ_01823 [Oryza sativa Japonica Group]
          Length = 639

 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 61/196 (31%), Positives = 91/196 (46%), Gaps = 1/196 (0%)
 Frame = +3

Query: 168 WTIWKERCAHIFTGKTISLPIDIAKTANHLTSQHLGKHHKNQTQPAQPSTHLPITKTWLA 347
           W  WKER   +  G     P +++    HL     G+  +   +   P T       W  
Sbjct: 348 WQWWKER-NEVREGGIPRSPAELS----HLIMSQAGEFVRMNVKEKSPRTGE--CAVWRR 400

Query: 348 PPSSFVKINMDIAFYSEIKPVGIGYVMRDDNGIFLAAGTSRACG-RNAEEGESRGLKCAI 524
           PP +FVKIN D A+ S +K  G G+V+RD  G  L AG   A   ++A   E      AI
Sbjct: 401 PPLNFVKINTDGAYSSNMKQGGWGFVIRDQTGAVLQAGAGPAAYLQDAFHAEVVACAAAI 460

Query: 525 QWAYVLGYNKIIIETDCKTVADFWNHHATNIGRIAANIIIDAQYYISSFDSLTVTHVDRS 704
           + A   G ++I +ETD   +      ++ N+  +   I+      +S F S +V++  RS
Sbjct: 461 KTASERGMSRIELETDSMMLRYAIQDNSFNLSSLGGVILEIKHIILSCFHSFSVSYSPRS 520

Query: 705 CNKVAHRLATSAHHLR 752
           CNKVAH LA    +L+
Sbjct: 521 CNKVAHELAAYGCNLQ 536


>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
          Length = 1594

 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 61/196 (31%), Positives = 91/196 (46%), Gaps = 1/196 (0%)
 Frame = +3

Query: 168  WTIWKERCAHIFTGKTISLPIDIAKTANHLTSQHLGKHHKNQTQPAQPSTHLPITKTWLA 347
            W  WKER   +  G     P +++    HL     G+  +   +   P T       W  
Sbjct: 1381 WQWWKER-NEVREGGIPRSPAELS----HLIMSQAGEFVRMNVKEKSPRTGE--CAVWRR 1433

Query: 348  PPSSFVKINMDIAFYSEIKPVGIGYVMRDDNGIFLAAGTSRACG-RNAEEGESRGLKCAI 524
            PP +FVKIN D A+ S +K  G G+V+RD  G  L AG   A   ++A   E      AI
Sbjct: 1434 PPLNFVKINTDGAYSSNMKQGGWGFVIRDQTGAVLQAGAGPAAYLQDAFHAEVVACAAAI 1493

Query: 525  QWAYVLGYNKIIIETDCKTVADFWNHHATNIGRIAANIIIDAQYYISSFDSLTVTHVDRS 704
            + A   G ++I +ETD   +      ++ N+  +   I+      +S F S +V++  RS
Sbjct: 1494 KTASERGMSRIELETDSMMLRYAIQDNSFNLSSLGGVILEIKHIILSCFHSFSVSYSPRS 1553

Query: 705  CNKVAHRLATSAHHLR 752
            CNKVAH LA    +L+
Sbjct: 1554 CNKVAHELAAYGCNLQ 1569