BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023533
         (1174 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulga...    74   7e-11
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...    72   2e-10
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga...    72   3e-10
gb|AAX95129.1| retrotransposon protein, putative, unclassified [...    72   4e-10
gb|ABA91837.2| retrotransposon protein, putative, unclassified [...    72   4e-10

>emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1365

 Score = 73.9 bits (180), Expect = 7e-11
 Identities = 36/80 (45%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
 Frame = +3

Query: 918  ILAWNCRGCRKPS--TVRHLLSLIGKQNPDILFLSETKLSGASMASINLQLGFPNIFSVS 1091
            +LAWNCRG R     T+  L  L+ +  P ILFLSETK   + ++ + + LGFPN+ +V 
Sbjct: 3    VLAWNCRGLRSADSPTIPFLGWLVRQCLPQILFLSETKSDSSLISKLAMYLGFPNVATVD 62

Query: 1092 SCNKAGGLALLWKDNIDLNI 1151
            S N AGGLAL W ++++L++
Sbjct: 63   SINNAGGLALFWSNDVNLDL 82


>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 72.4 bits (176), Expect = 2e-10
 Identities = 34/84 (40%), Positives = 48/84 (57%)
 Frame = +3

Query: 918  ILAWNCRGCRKPSTVRHLLSLIGKQNPDILFLSETKLSGASMASINLQLGFPNIFSVSSC 1097
            IL WNCRG   P TVR L        PDI+FLSET ++     ++  +LGF N F VSS 
Sbjct: 3    ILCWNCRGVGNPRTVRQLRKWSTFYAPDIMFLSETMINKTESEALKSRLGFANAFGVSSR 62

Query: 1098 NKAGGLALLWKDNIDLNIFYSCKH 1169
             +AGGL + W++ +  ++    +H
Sbjct: 63   GRAGGLCVFWREELSFSLVSFSQH 86


>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 72.0 bits (175), Expect = 3e-10
 Identities = 34/84 (40%), Positives = 50/84 (59%)
 Frame = +3

Query: 918  ILAWNCRGCRKPSTVRHLLSLIGKQNPDILFLSETKLSGASMASINLQLGFPNIFSVSSC 1097
            IL WNCRG   P +VR L S   +  PDI+F+SET ++   + ++   LGF N F V+S 
Sbjct: 3    ILCWNCRGLGNPWSVRQLRSWSNQFAPDIIFVSETMINKIEVEALKSWLGFSNAFGVASV 62

Query: 1098 NKAGGLALLWKDNIDLNIFYSCKH 1169
             +AGGL L WK+ +  ++    +H
Sbjct: 63   GRAGGLCLYWKEEVMFSLVSFSQH 86


>gb|AAX95129.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group] gi|62733115|gb|AAX95232.1|
            retrotransposon protein, putative, unclassified [Oryza
            sativa Japonica Group]
          Length = 1324

 Score = 71.6 bits (174), Expect = 4e-10
 Identities = 35/78 (44%), Positives = 47/78 (60%)
 Frame = +3

Query: 918  ILAWNCRGCRKPSTVRHLLSLIGKQNPDILFLSETKLSGASMASINLQLGFPNIFSVSSC 1097
            I+AWNCRG     TVR LL+L  + +PDILFLS TK+    +     +LG PN+      
Sbjct: 450  IIAWNCRGLGNGPTVRGLLNLQKEDDPDILFLSNTKMDTNKLQCFRWKLGMPNLVVKDCQ 509

Query: 1098 NKAGGLALLWKDNIDLNI 1151
             K+GGLA+ WK  I+L +
Sbjct: 510  GKSGGLAVFWKKEINLRL 527


>gb|ABA91837.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1301

 Score = 71.6 bits (174), Expect = 4e-10
 Identities = 35/78 (44%), Positives = 47/78 (60%)
 Frame = +3

Query: 918  ILAWNCRGCRKPSTVRHLLSLIGKQNPDILFLSETKLSGASMASINLQLGFPNIFSVSSC 1097
            I+AWNCRG     TVR LL+L  + +PDILFLS TK+    +     +LG PN+      
Sbjct: 427  IIAWNCRGLGNGPTVRGLLNLQKEDDPDILFLSNTKMDTNKLQCFRWKLGMPNLVVKDCQ 486

Query: 1098 NKAGGLALLWKDNIDLNI 1151
             K+GGLA+ WK  I+L +
Sbjct: 487  GKSGGLAVFWKKEINLRL 504